Data search
Results for MligTC455_48495
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48495 | 1493 | 31.10 | Mlig455_042160 | Neo: - Age: - |
Mlig455_042160 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=20.9]} {RNA1509_34102} {RNA1310_635} {RNA815_542.1} |
Cumulative graph for MligTC455_48495
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.533 | 5.193 | 0.41484 | 1.00000 | |
| RegionR2 | -0.32 | 5.193 | 0.37024 | 0.76502 | |
| RegionR3 | -0.039 | 5.193 | 0.89408 | 1.00000 | |
| RegionR4 | 0.398 | 5.193 | 0.24262 | 0.54029 | |
| RegionR5 | 0.551 | 5.193 | 0.03713 | 0.15108 | |
| RegionR6 | 0.223 | 5.193 | 0.44000 | 0.99965 | |
| RegionR7 | -0.601 | 5.193 | 0.11717 | 0.64670 | |
| RegionR8 | -0.746 | 5.193 | 0.11656 | 0.63005 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.121 | 5.193 | 0.23060 | 0.96044 | |
| RegenerationR2 | -0.714 | 5.193 | 0.03762 | 0.31997 | |
| RegenerationR3 | -0.186 | 5.193 | 0.59804 | 0.90737 | |
| RegenerationR4 | -0.375 | 5.193 | 0.29764 | 0.73990 | |
| RegenerationR5 | -0.34 | 5.193 | 0.31445 | 0.73917 | |
| RegenerationR6 | -0.45 | 5.193 | 0.20715 | 0.55003 | |
| RegenerationBL | -0.208 | 5.193 | 0.61075 | 0.95583 | |
| RegenerationTP | 0.467 | 5.193 | 0.28186 | 0.72953 |
Genes with expression patterns similar to MligTC455_48495
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48495 | 1493 | 31.1 | Mlig455_042160 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042160 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=20.9]} {RNA1509_34102} {RNA1310_635} {RNA815_542.1} | |
| 2. | MligTC455_51492 | 890 | 18.54 | Mlig455_066390 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.126/0.00425 |
2.457 | - | 0.710 | - | 0.972 | - | 0.775 | Mlig455_066390 {REF} {Length: 919} {TRANSSPLICED} {Pfam: K-box region [PF01486.19, score=19.6]} {RNA1509_47304, RNA1509_53983} {RNA1310_22102.1, RNA1509_53983} {RNA1509_53983, RNA815_17619.3} | |
| 3. | MligTC455_37896 | 4590 | 95.62 | Mlig455_048970 | Neo: - Age: logFC(26M/2M)=0.339 Region-enriched R4: 1.540/0.00001 |
1.732 | - | - | - | 0.771 | - | 0.961 | Mlig455_048970 {REF} {Length: 1062} {Smed: dd_Smed_v6_951_0_1, dd_Smed_v6_951_0_1, [RH, Score=59.7, Expect=5e-13]} {RNA1509_1589} {RNA1310_12812.1} {RNA815_14113} | |
| 4. | MligTC455_41427 | 1077 | 22.43 | Mlig455_036901 | Neo: - Age: logFC(26M/2M)=-0.427 Region-enriched R4: 1.103/0.04999 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_036901 {REF} {Length: 1143} {TRANSSPLICED} {RNA1509_32385, RNA1509_48830, RNA1509_58161, RNA1509_9402} {RNA1310_26775, RNA1509_32385, RNA1509_48830, RNA1509_58161, RNA1509_9402} {RNA1509_32385, RNA1509_48830, RNA1509_58161, RNA1509_9402, RNA815_13831} |
Berezikov Lab - 2020-2021 © ERIBA