Data search
Results for MligTC455_48524
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48524 | 28 | 0.59 | Mlig455_018531 | Neo: - Age: - |
CTNNAL1 | Mlig455_018531 {REF} {Length: 3229} {Pfam: Vinculin family [PF01044.21, score=39.2]} {Human: ENSG00000119326, CTNNAL1, catenin alpha like 1, [Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000038816, Ctnnal1, catenin (cadherin associated protein), alpha-like 1, [Score=124, Expect=9e-30]} {Dmel: FBgn0010215, alpha-Cat, alpha Catenin, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00000832, ctn-1, Alpha-CaTuliN (Catenin/vinculin related), [Score=121, Expect=7e-29]} {RNA1509_31312} {RNA1310_89059} {RNA815_54768} |
Cumulative graph for MligTC455_48524
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.737 | 1.179 | 0.99955 | 1.00000 | |
| RegionR2 | -0.269 | 1.179 | 0.77968 | 1.00000 | |
| RegionR3 | 2.926 | 1.179 | 0.02646 | 0.27784 | |
| RegionR4 | 2.483 | 1.179 | 0.16507 | 0.42566 | |
| RegionR5 | 2.071 | 1.179 | 0.12392 | 0.35379 | |
| RegionR6 | -0.573 | 1.179 | 0.85383 | 1.00000 | |
| RegionR7 | -2.493 | 1.179 | 0.99960 | 1.00000 | |
| RegionR8 | -2.407 | 1.179 | 0.99957 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.251 | 1.179 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.99 | 1.179 | 0.44215 | 0.84110 | |
| RegenerationR3 | -0.892 | 1.179 | 0.37801 | 0.78950 | |
| RegenerationR4 | 0.77 | 1.179 | 0.65459 | 0.93532 | |
| RegenerationR5 | 0.572 | 1.179 | 0.59737 | 0.90901 | |
| RegenerationR6 | -0.902 | 1.179 | 0.69080 | 0.91937 | |
| RegenerationBL | -0.896 | 1.179 | 0.99980 | 1.00000 | |
| RegenerationTP | -0.62 | 1.179 | 0.99994 | 1.00000 |
Genes with expression patterns similar to MligTC455_48524
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48524 | 28 | 0.59 | Mlig455_018531 | Neo: - Age: - |
CTNNAL1 | 5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018531 {REF} {Length: 3229} {Pfam: Vinculin family [PF01044.21, score=39.2]} {Human: ENSG00000119326, CTNNAL1, catenin alpha like 1, [Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000038816, Ctnnal1, catenin (cadherin associated protein), alpha-like 1, [Score=124, Expect=9e-30]} {Dmel: FBgn0010215, alpha-Cat, alpha Catenin, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00000832, ctn-1, Alpha-CaTuliN (Catenin/vinculin related), [Score=121, Expect=7e-29]} {RNA1509_31312} {RNA1310_89059} {RNA815_54768} |
| 2. | MligTC455_21544 | 12 | 0.25 | Mlig455_035548 | Neo: - Age: - Region-enriched R4: 5.185/0.01392 |
0.985 | - | - | - | 0.985 | - | - | Mlig455_035548 {REF} {Length: 1503} {RNA1310_75943.2} {RNA815_37596} | |
| 3. | MligTC455_13862 | 174 | 3.62 | Mlig455_034030 | Neo: - Age: - |
SOX11 | 0.966 | - | - | 0.966 | - | - | - | Mlig455_034030 {REF} {Length: 2069} {Pfam: HMG (high mobility group) box [PF00505.21, score=64.8]; HMG-box domain [PF09011.12, score=24.3]} {Human: ENSG00000176887, SOX11, SRY-box 11, [Score=102, Expect=1e-24]; ENSG00000164736, SOX17, SRY-box 17, [Score=102, Expect=2e-24]; ENSG00000171056, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000203883, SOX18, SRY-box 18, [Score=101, Expect=3e-24]; ENSG00000285438, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000125398, SOX9, SRY-box 9, [Score=101, Expect=5e-24]; ENSG00000143842, SOX13, SRY-box 13, [Score=100, Expect=2e-23]; ENSG00000005513, SOX8, SRY-box 8, [Score=100, Expect=8e-24]; ENSG00000100146, SOX10, SRY-box 10, [Score=99.4, Expect=2e-23]; ENSG00000110693, SOX6, SRY-box 6, [Score=98.2, Expect=1e-22]; ENSG00000124766, SOX4, SRY-box 4, [Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [Score=107, Expect=1e-28]; ENSMUSG00000063060, Sox7, SRY (sex determining region Y)-box 7, [Score=104, Expect=2e-25]; ENSMUSG00000063632, Sox11, SRY (sex determining region Y)-box 11, [Score=102, Expect=6e-25]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=111, Expect=2e-27]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [Score=99.8, Expect=2e-24]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=94.4, Expect=2e-22]} {RNA1310_58968} {RNA815_59621} |
| 4. | MligTC455_14838 | 9 | 0.2 | Mlig455_037700 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_037700 {REF} {Length: 377} {RNA1310_66089} {RNA815_43091} | |
| 5. | MligTC455_26535 | 92 | 1.91 | Mlig455_028631 | Neo: - Age: logFC(26M/2M)=-0.989 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_028631 {REF} {Length: 2945} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=55.1]} {RNA1509_37009, RNA1509_38508} {RNA1310_10694.2, RNA1509_37009, RNA1509_38508} {RNA1509_37009, RNA1509_38508, RNA815_4977} | |
| 6. | MligTC455_11287 | 42 | 0.87 | Mlig455_033901 | Neo: - Age: - Region-enriched R5: 4.474/0.00096 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_033901 {REF} {Length: 674} {RNA1310_69364} {RNA815_35056} |
Berezikov Lab - 2020-2021 © ERIBA