Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_48572 | 27 | 0.57 | Mlig455_068333 | Neo: - Age: Up-Down-Down |
INPP5A | Mlig455_068333 {REF} {Length: 2882} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=26.2]} {Human: ENSG00000068383, INPP5A, inositol polyphosphate-5-phosphatase A, [Score=248, Expect=2e-79]} {Mouse: ENSMUSG00000025477, Inpp5a, inositol polyphosphate-5-phosphatase A, [Score=246, Expect=5e-79]} {Dmel: FBgn0259178, 5PtaseI, [Score=243, Expect=3e-78]} {Celegans: WBGene00002146, ipp-5, Probable type I inositol 1,4,5-trisphosphate 5-phosphatase, [Score=155, Expect=3e-44]} {Smed: dd_Smed_v6_266_0_1, dd_Smed_v6_266_0_1, [RH, Score=229, Expect=6e-74]} {RNA1509_40293} {RNA1310_16939} {RNA815_13822} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 3.621 | 0.996 | 1.00000 | 1.00000 | |
RegionR2 | -1.048 | 0.996 | 0.99759 | 1.00000 | |
RegionR3 | -3.134 | 0.996 | 1.00000 | 1.00000 | |
RegionR4 | 3.33 | 0.996 | 0.11060 | 0.32896 | |
RegionR5 | 0.033 | 0.996 | 0.76643 | 1.00000 | |
RegionR6 | -3.316 | 0.996 | 1.00000 | 1.00000 | |
RegionR7 | -2.203 | 0.996 | 1.00000 | 1.00000 | |
RegionR8 | 2.717 | 0.996 | 0.92555 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -4.349 | 0.996 | 1.00000 | 1.00000 | |
RegenerationR2 | 1.831 | 0.996 | 0.51875 | 0.87868 | |
RegenerationR3 | 2.061 | 0.996 | 0.81259 | 0.98567 | |
RegenerationR4 | -1.708 | 0.996 | 0.29861 | 0.74064 | |
RegenerationR5 | -0.748 | 0.996 | 0.45788 | 0.83487 | |
RegenerationR6 | 1.681 | 0.996 | 0.61754 | 0.87926 | |
RegenerationBL | 2.186 | 0.996 | 0.38301 | 0.75154 | |
RegenerationTP | 0.532 | 0.996 | 0.98831 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_48572 | 27 | 0.57 | Mlig455_068333 | Neo: - Age: Up-Down-Down |
INPP5A | 3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_068333 {REF} {Length: 2882} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=26.2]} {Human: ENSG00000068383, INPP5A, inositol polyphosphate-5-phosphatase A, [Score=248, Expect=2e-79]} {Mouse: ENSMUSG00000025477, Inpp5a, inositol polyphosphate-5-phosphatase A, [Score=246, Expect=5e-79]} {Dmel: FBgn0259178, 5PtaseI, [Score=243, Expect=3e-78]} {Celegans: WBGene00002146, ipp-5, Probable type I inositol 1,4,5-trisphosphate 5-phosphatase, [Score=155, Expect=3e-44]} {Smed: dd_Smed_v6_266_0_1, dd_Smed_v6_266_0_1, [RH, Score=229, Expect=6e-74]} {RNA1509_40293} {RNA1310_16939} {RNA815_13822} |
2. | MligTC455_41213 | 171 | 3.57 | Mlig455_017736, Mlig455_058991 | Neo: - Age: - Region-enriched R7: 5.047/0.00000 |
SLC7A1, SLC7A4 | 1.803 | - | - | - | 0.847 | 0.956 | - | Mlig455_017736 {REF} {Length: 3254} {Pfam: Amino acid permease [PF13520.8, score=95.9]; Amino acid permease [PF00324.23, score=86.7]; C-terminus of AA_permease [PF13906.8, score=52.9]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=206, Expect=1e-58]; ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=206, Expect=7e-59]; ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=204, Expect=1e-57]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=217, Expect=4e-63]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=208, Expect=4e-60]} {Dmel: FBgn0036764, CG5535, [Score=202, Expect=7e-58]} {Celegans: WBGene00016806, C50D2.2, [Score=208, Expect=2e-60]} {Smed: dd_Smed_v6_8652_0_8, dd_Smed_v6_8652_0_8, [Score=328, Expect=1e-106]} {RNA1509_28368} {RNA1310_8590.1, RNA1509_28368} {RNA1509_28368, RNA815_19858} Mlig455_058991 {REF} {Length: 1206} {Pfam: Amino acid permease [PF00324.23, score=30.5]; Amino acid permease [PF13520.8, score=29.8]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=67.0, Expect=2e-11]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=62.0, Expect=4e-10]} {Dmel: FBgn0036984, CG13248, [Score=62.0, Expect=4e-10]} {Celegans: WBGene00017747, F23F1.6, [Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_8652_0_6, dd_Smed_v6_8652_0_6, [Score=101, Expect=2e-23]} {RNA1509_28368} {RNA1310_8590.1} {RNA815_31735} |
3. | MligTC455_41212 | 267 | 5.57 | Mlig455_058990 | Neo: - Age: - Region-enriched R7: 3.930/0.00000 |
1.74 | - | - | - | - | 0.953 | 0.787 | Mlig455_058990 {REF} {Length: 864} {NoTransDecoderORF} {RNA1509_28368} {RNA1310_8590.1} {RNA815_19858} | |
4. | MligTC455_26366 | 75 | 1.56 | Mlig455_013893 | Neo: - Age: - |
NSUN7 | 1.684 | - | - | - | 0.731 | - | 0.953 | Mlig455_013893 {REF} {Length: 1904} {Human: ENSG00000179299, NSUN7, NOP2/Sun RNA methyltransferase family member 7, [Score=167, Expect=4e-45]} {Mouse: ENSMUSG00000029206, Nsun7, NOL1/NOP2/Sun domain family, member 7, [Score=164, Expect=3e-44]} {Dmel: FBgn0266099, CG44836, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00013151, nsun-5, Nop2 (NOP2)/SUN domain family member, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_30093_0_1, dd_Smed_v6_30093_0_1, [Score=203, Expect=3e-60]} {RNA1310_17601} {RNA815_32144} |
5. | MligTC455_01119 | 28 | 0.59 | Mlig455_046582 | Neo: - Age: - |
0.982 | - | - | - | - | - | 0.982 | Mlig455_046582 {REF} {Length: 361} {NoTransDecoderORF} {RNA1509_37367} {RNA1310_41038} {RNA815_15609} | |
6. | MligTC455_22362 | 160 | 3.34 | Mlig455_070376 | Neo: - Age: - Region-enriched R4: 2.051/0.01352 |
0.982 | - | - | - | 0.982 | - | - | Mlig455_070376 {REF} {Length: 2467} {NoTransDecoderORF} {RNA1509_12100} {RNA1310_35660.1} {RNA815_14259} | |
7. | MligTC455_51085 | 51 | 1.07 | Mlig455_012753 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_012753 {REF} {Length: 2051} {RNA1509_34107} {RNA1310_60475.1} {RNA815_53868} | |
8. | MligTC455_32449 | 129 | 2.7 | Mlig455_029634 | Neo: - Age: - |
PKD1L2 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_029634 {REF} {Length: 9922} {Pfam: Polycystin cation channel [PF08016.14, score=221.1]; REJ domain [PF02010.17, score=109.3]; PLAT/LH2 domain [PF01477.25, score=39.4]; Ion transport protein [PF00520.33, score=34.4]; PKD domain [PF00801.22, score=23.9]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=137, Expect=3e-31]; ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=135, Expect=3e-31]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=151, Expect=8e-36]; ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [Score=144, Expect=6e-34]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=164, Expect=8e-40]} {Smed: dd_Smed_v6_15525_0_1, dd_Smed_v6_15525_0_1, [Score=154, Expect=5e-37]} {RNA1509_5774} {RNA1310_70.1} {RNA815_41} |
9. | MligTC455_41131 | 40 | 0.84 | Mlig455_042108 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_042108 {REF} {Length: 1899} {Pfam: F5/8 type C domain [PF00754.27, score=36.7]} {Celegans: WBGene00015646, mlt-10, [Score=161, Expect=1e-44]} {RNA1310_54710.3} {RNA815_24559} | |
10. | MligTC455_19233 | 15 | 0.3 | Mlig455_032773, Mlig455_032776 | Neo: - Age: - |
0.966 | - | - | - | 0.966 | - | - | Mlig455_032773 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_52318} {RNA1310_46177} {RNA815_35369} Mlig455_032776 {REF} {Length: 406} {NoTransDecoderORF} {RNA1310_146421} {RNA815_35369} |
|
11. | MligTC455_20963 | 45 | 0.95 | Mlig455_003762 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_003762 {REF} {Length: 1917} {NoTransDecoderORF} {RNA1509_15862} {RNA1310_73168} {RNA815_32666} | |
12. | MligTC455_37270 | 86 | 1.79 | Mlig455_022293 | Neo: - Age: - |
CASP3 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_022293 {REF} {Length: 2773} {Pfam: Caspase domain [PF00656.24, score=93.1]; Ankyrin repeats (3 copies) [PF12796.9, score=77.8]; Ankyrin repeats (many copies) [PF13857.8, score=62.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.0]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeat [PF00023.32, score=28.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=109, Expect=7e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]; ENSG00000165806, CASP7, caspase 7, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=9e-25]; ENSMUSG00000031628, Casp3, caspase 3, [Score=103, Expect=3e-24]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=3e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=102, Expect=3e-24]} {RNA1509_54818} {RNA1310_7187, RNA1509_54818} {RNA1509_54818, RNA815_8712} |
13. | MligTC455_29878 | 24 | 0.49 | Mlig455_032877 | Neo: - Age: - |
PKDREJ | 0.959 | - | - | - | 0.959 | - | - | Mlig455_032877 {REF} {Length: 2692} {Pfam: REJ domain [PF02010.17, score=190.5]; Polycystin cation channel [PF08016.14, score=164.6]; Ion transport protein [PF00520.33, score=37.9]; PLAT/LH2 domain [PF01477.25, score=29.6]; PKD domain [PF00801.22, score=29.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=171, Expect=1e-41]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=146, Expect=2e-34]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=140, Expect=2e-32]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=68.2, Expect=7e-11]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=249, Expect=7e-66]} {RNA1310_24455} {RNA815_11208} |
14. | MligTC455_22686 | 26 | 0.55 | Mlig455_000566, Mlig455_030366 | Neo: - Age: - |
GRIK3 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000566 {REF} {Length: 2943} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=52.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=5e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=6e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=154, Expect=7e-38]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=152, Expect=2e-37]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=2e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=4e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=4e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=155, Expect=5e-39]} {RNA1310_20394.1} {RNA815_45848} Mlig455_030366 {REF} {Length: 2933} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=51.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=4e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=5e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=150, Expect=5e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=3e-35]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=144, Expect=9e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=5e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=5e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=154, Expect=1e-38]} {RNA1310_20394.1} {RNA815_45848} |
15. | MligTC455_30130 | 62 | 1.29 | Mlig455_040669, Mlig455_068784, Mlig455_068802 | Neo: Irradiation Age: Up-Down-Down |
0.956 | - | - | - | 0.956 | - | - | Mlig455_040669 {REF} {Length: 3166} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1} Mlig455_068784 {REF} {Length: 3176} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1, RNA1509_20007} {RNA1509_20007, RNA815_353.1} Mlig455_068802 {REF} {Length: 3206} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1} |
|
16. | MligTC455_27290 | 257 | 5.35 | Mlig455_030127, Mlig455_030193 | Neo: - Age: - Region-enriched R6: 7.668/0.00057 |
CHAC2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_030127 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755} Mlig455_030193 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755} |
17. | MligTC455_45052 | 26 | 0.54 | Mlig455_047471 | Neo: - Age: Up-Down-Up |
0.955 | - | - | - | 0.955 | - | - | Mlig455_047471 {REF} {Length: 3750} {TRANSSPLICED} {RNA1310_38765} {RNA815_44260} | |
18. | MligTC455_39845 | 141 | 2.94 | Mlig455_002533, Mlig455_002635 | Neo: - Age: - Region-enriched R2: 3.456/0.04589 |
DLX6 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_002533 {REF} {Length: 2344} {Pfam: Homeodomain [PF00046.31, score=75.8]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=9e-41]} {RNA1509_39701} {RNA1310_10459.1, RNA1509_39701} {RNA1509_39701, RNA815_21765} Mlig455_002635 {REF} {Length: 2355} {Pfam: Homeodomain [PF00046.31, score=74.4]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=1e-40]} {RNA1509_39701} {RNA1310_10459.1} {RNA815_21765} |