TomoSeq data search

Data search

Results for MligTC455_48575

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48575	211	4.40	Mlig455_020695, Mlig455_020765	Neo: - Age: Up-Down-Up		Mlig455_020695 {REF} {Length: 5824} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_6067.1, RNA1509_16956} {RNA1509_16956, RNA815_5177} Mlig455_020765 {REF} {Length: 3338} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_20882.1} {RNA815_34187}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_48575

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.457	2.639	1.00000	1.00000
RegionR2	0.25	2.639	0.57329	0.93180
RegionR3	-4.375	2.639	1.00000	1.00000
RegionR4	1.253	2.639	0.22320	0.51384
RegionR5	1.023	2.639	0.20546	0.49881
RegionR6	1.103	2.639	0.20956	0.78680
RegionR7	0.364	2.639	0.59240	1.00000
RegionR8	2.839	2.639	0.04918	0.43512

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.986	2.639	0.34137	1.00000
RegenerationR2	1.876	2.639	0.03993	0.33044
RegenerationR3	4.905	2.639	0.00173	0.06962
RegenerationR4	0.491	2.639	0.63300	0.92445
RegenerationR5	0.672	2.639	0.45107	0.83106
RegenerationR6	1.418	2.639	0.11677	0.42028
RegenerationBL	1.372	2.639	0.18007	0.50897
RegenerationTP	0.512	2.639	0.67398	1.00000

Genes with expression patterns similar to MligTC455_48575

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48575	211	4.4	Mlig455_020695, Mlig455_020765	Neo: - Age: Up-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020695 {REF} {Length: 5824} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_6067.1, RNA1509_16956} {RNA1509_16956, RNA815_5177} Mlig455_020765 {REF} {Length: 3338} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_20882.1} {RNA815_34187}
2.	MligTC455_51695	429	8.93	Mlig455_011268	Neo: - Age: Down-Down-Up	FAM47E	0.96	-	-	-	-	0.960	-	Mlig455_011268 {REF} {Length: 2157} {Pfam: FAM47 family [PF14642.8, score=51.4]} {Human: ENSG00000189157, FAM47E, family with sequence similarity 47 member E, [RH, Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000078315, Fam47c, family with sequence similarity 47, member C, [RH, Score=119, Expect=5e-29]} {Smed: dd_Smed_v6_10346_0_1, dd_Smed_v6_10346_0_1, [RH, Score=294, Expect=2e-95]} {RNA1509_32582, RNA1509_8031} {RNA1310_12665, RNA1509_32582, RNA1509_8031} {RNA1509_32582, RNA1509_8031, RNA815_4489.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48575

211

4.4

Mlig455_020695, Mlig455_020765

Neo: -

Age: Up-Down-Up

1.000

Mlig455_020695 {REF} {Length: 5824} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_6067.1, RNA1509_16956} {RNA1509_16956, RNA815_5177}

Mlig455_020765 {REF} {Length: 3338} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_20882.1} {RNA815_34187}

MligTC455_51695

429

8.93

Mlig455_011268

Neo: -

Age: Down-Down-Up

FAM47E

0.96

0.960

Mlig455_011268 {REF} {Length: 2157} {Pfam: FAM47 family [PF14642.8, score=51.4]} {Human: ENSG00000189157, FAM47E, family with sequence similarity 47 member E, [RH, Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000078315, Fam47c, family with sequence similarity 47, member C, [RH, Score=119, Expect=5e-29]} {Smed: dd_Smed_v6_10346_0_1, dd_Smed_v6_10346_0_1, [RH, Score=294, Expect=2e-95]} {RNA1509_32582, RNA1509_8031} {RNA1310_12665, RNA1509_32582, RNA1509_8031} {RNA1509_32582, RNA1509_8031, RNA815_4489.1}