TomoSeq data search

Data search

Results for MligTC455_48589

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48589	326	6.79	Mlig455_045416	Neo: - Age: -		Mlig455_045416 {REF} {Length: 2598} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=34.3]} {Dmel: FBgn0031498, CG17260, [RH, Score=175, Expect=1e-51]} {RNA1509_51130} {RNA1310_12167, RNA1509_51130} {RNA1509_51130, RNA815_23971}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_48589

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.005	3.178	0.39509	1.00000
RegionR2	0.344	3.178	0.55595	0.91980
RegionR3	-0.094	3.178	0.82418	1.00000
RegionR4	-0.456	3.178	0.42773	0.75600
RegionR5	0.622	3.178	0.06974	0.23766
RegionR6	-0.242	3.178	0.58437	1.00000
RegionR7	-1.414	3.178	0.04319	0.39990
RegionR8	0.234	3.178	0.72652	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.827	3.178	0.22169	0.95604
RegenerationR2	-0.008	3.178	0.98659	1.00000
RegenerationR3	0.707	3.178	0.17320	0.60884
RegenerationR4	0.719	3.178	0.19836	0.64379
RegenerationR5	-0.038	3.178	0.94330	1.00000
RegenerationR6	0.607	3.178	0.28658	0.63650
RegenerationBL	0.87	3.178	0.25670	0.61376
RegenerationTP	-1.082	3.178	0.26298	0.71098

Genes with expression patterns similar to MligTC455_48589

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48589	326	6.79	Mlig455_045416	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045416 {REF} {Length: 2598} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=34.3]} {Dmel: FBgn0031498, CG17260, [RH, Score=175, Expect=1e-51]} {RNA1509_51130} {RNA1310_12167, RNA1509_51130} {RNA1509_51130, RNA815_23971}
2.	MligTC455_26455	199	4.14	Mlig455_012225	Neo: Irradiation Age: -	PRKDC	0.954	-	-	-	-	-	0.954	Mlig455_012225 {REF} {Length: 13583} {Pfam: NUC194 domain [PF08163.14, score=231.8]; DNA-PKcs, CC5 [PF19704.1, score=216.9]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=144.6]; FAT domain [PF02259.25, score=33.4]; FATC domain [PF02260.22, score=25.0]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=381, Expect=7e-105]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=509, Expect=5e-144]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=157, Expect=2e-37]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=157, Expect=2e-37]} {Smed: dd_Smed_v6_8462_0_2, dd_Smed_v6_8462_0_2, [RH, Score=281, Expect=3e-75]} {RNA1509_11402} {RNA1310_301.1} {RNA815_3968}
3.	MligTC455_24566	136	2.84	Mlig455_035653	Neo: - Age: -	PEF1	0.95	-	-	-	-	0.950	-	Mlig455_035653 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=40.9]; EF hand [PF00036.34, score=40.4]; EF-hand domain pair [PF13499.8, score=34.8]; EF hand [PF13202.8, score=29.3]; EF-hand domain pair [PF13833.8, score=20.3]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=73.2, Expect=5e-15]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=75.5, Expect=5e-16]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=73.2, Expect=3e-16]} {RNA1509_33230} {RNA1310_37065} {RNA815_24745}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48589

326

6.79

Mlig455_045416

Neo: -

Age: -

1.000

MligTC455_26455

199

4.14

Mlig455_012225

Neo: Irradiation

Age: -

PRKDC

0.954

Mlig455_012225 {REF} {Length: 13583} {Pfam: NUC194 domain [PF08163.14, score=231.8]; DNA-PKcs, CC5 [PF19704.1, score=216.9]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=144.6]; FAT domain [PF02259.25, score=33.4]; FATC domain [PF02260.22, score=25.0]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=381, Expect=7e-105]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=509, Expect=5e-144]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=157, Expect=2e-37]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=157, Expect=2e-37]} {Smed: dd_Smed_v6_8462_0_2, dd_Smed_v6_8462_0_2, [RH, Score=281, Expect=3e-75]} {RNA1509_11402} {RNA1310_301.1} {RNA815_3968}

MligTC455_24566

136

2.84

Mlig455_035653

Neo: -

Age: -

PEF1

0.95

0.950

Mlig455_035653 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=40.9]; EF hand [PF00036.34, score=40.4]; EF-hand domain pair [PF13499.8, score=34.8]; EF hand [PF13202.8, score=29.3]; EF-hand domain pair [PF13833.8, score=20.3]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=73.2, Expect=5e-15]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=75.5, Expect=5e-16]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=73.2, Expect=3e-16]} {RNA1509_33230} {RNA1310_37065} {RNA815_24745}