TomoSeq data search

Data search

Results for MligTC455_48590

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48590	7433	154.85	Mlig455_051501, Mlig455_051539	Neo: - Age: -	PPM1B	Mlig455_051501 {REF} {Length: 3332} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165} {RNA1310_14420.1} {RNA815_6636} Mlig455_051539 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165, RNA1509_16576} {RNA1310_14420.1, RNA1509_1165, RNA1509_16576} {RNA1509_1165, RNA1509_16576, RNA815_6636}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48590

7433

154.85

Mlig455_051501, Mlig455_051539

Neo: -

Age: -

PPM1B

Mlig455_051501 {REF} {Length: 3332} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165} {RNA1310_14420.1} {RNA815_6636}

Mlig455_051539 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165, RNA1509_16576} {RNA1310_14420.1, RNA1509_1165, RNA1509_16576} {RNA1509_1165, RNA1509_16576, RNA815_6636}

Cumulative graph for MligTC455_48590

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.674	7.39	0.11531	0.70245
RegionR2	-0.359	7.39	0.14256	0.47002
RegionR3	0.368	7.39	0.06888	0.46388
RegionR4	0.928	7.39	0.00012	0.00182
RegionR5	0.62	7.39	0.00133	0.01278
RegionR6	0.007	7.39	0.97181	1.00000
RegionR7	-0.414	7.39	0.07254	0.51909
RegionR8	-0.477	7.39	0.07396	0.51943

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.481	7.39	0.43382	1.00000
RegenerationR2	0	7.39	0.99844	1.00000
RegenerationR3	-0.254	7.39	0.31191	0.74233
RegenerationR4	-0.296	7.39	0.26324	0.71090
RegenerationR5	-0.557	7.39	0.02463	0.26848
RegenerationR6	0.14	7.39	0.58285	0.85924
RegenerationBL	-0.171	7.39	0.49218	0.85721
RegenerationTP	-0.425	7.39	0.12811	0.54040

Genes with expression patterns similar to MligTC455_48590

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48590	7433	154.85	Mlig455_051501, Mlig455_051539	Neo: - Age: -	PPM1B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051501 {REF} {Length: 3332} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165} {RNA1310_14420.1} {RNA815_6636} Mlig455_051539 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=270.6]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=66.6]; Protein phosphatase 2C [PF13672.8, score=21.3]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=19.2]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=453, Expect=8e-158]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=449, Expect=6e-158]; ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=444, Expect=9e-156]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=459, Expect=2e-160]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=444, Expect=6e-156]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=404, Expect=2e-140]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=295, Expect=2e-96]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=469, Expect=2e-166]} {RNA1509_1165, RNA1509_16576} {RNA1310_14420.1, RNA1509_1165, RNA1509_16576} {RNA1509_1165, RNA1509_16576, RNA815_6636}
2.	MligTC455_46019	1165	24.26	Mlig455_055584	Neo: Int S/G2/M Age: logFC(26M/2M)=0.395	RRP8	0.964	-	-	-	0.964	-	-	Mlig455_055584 {REF} {Length: 1087} {Pfam: Hypothetical methyltransferase [PF05148.17, score=214.5]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [RH, Score=177, Expect=3e-51]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [RH, Score=182, Expect=3e-53]} {Dmel: FBgn0034422, CG7137, [RH, Score=152, Expect=5e-43]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [RH, Score=163, Expect=2e-48]} {RNA1509_28448} {RNA1310_32382} {RNA815_14841}
3.	MligTC455_20923	1907	39.74	Mlig455_003638	Neo: - Age: Down-Up-Down	SIRT6	0.954	-	-	-	0.954	-	-	Mlig455_003638 {REF} {Length: 2575} {Pfam: Sir2 family [PF02146.19, score=104.8]} {Human: ENSG00000077463, SIRT6, sirtuin 6, [Score=184, Expect=2e-54]} {Mouse: ENSMUSG00000034748, Sirt6, sirtuin 6, [Score=180, Expect=2e-53]} {Dmel: FBgn0037802, Sirt6, Sirtuin 6, [Score=190, Expect=1e-57]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=129, Expect=1e-34]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=189, Expect=2e-57]} {RNA1509_1125} {RNA1310_6401} {RNA815_10189}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48590

7433

154.85

Mlig455_051501, Mlig455_051539

Neo: -

Age: -

PPM1B

1.000

MligTC455_46019

1165

24.26

Mlig455_055584

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.395

RRP8

0.964

Mlig455_055584 {REF} {Length: 1087} {Pfam: Hypothetical methyltransferase [PF05148.17, score=214.5]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [RH, Score=177, Expect=3e-51]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [RH, Score=182, Expect=3e-53]} {Dmel: FBgn0034422, CG7137, [RH, Score=152, Expect=5e-43]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [RH, Score=163, Expect=2e-48]} {RNA1509_28448} {RNA1310_32382} {RNA815_14841}

MligTC455_20923

1907

39.74

Mlig455_003638

Neo: -

Age: Down-Up-Down

SIRT6

0.954

Mlig455_003638 {REF} {Length: 2575} {Pfam: Sir2 family [PF02146.19, score=104.8]} {Human: ENSG00000077463, SIRT6, sirtuin 6, [Score=184, Expect=2e-54]} {Mouse: ENSMUSG00000034748, Sirt6, sirtuin 6, [Score=180, Expect=2e-53]} {Dmel: FBgn0037802, Sirt6, Sirtuin 6, [Score=190, Expect=1e-57]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=129, Expect=1e-34]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=189, Expect=2e-57]} {RNA1509_1125} {RNA1310_6401} {RNA815_10189}