TomoSeq data search

Data search

Results for MligTC455_48596

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48596	89	1.86	Mlig455_017750	Neo: - Age: logFC(26M/2M)=1.323	LIMA1	Mlig455_017750 {REF} {Length: 1771} {Pfam: LIM domain [PF00412.24, score=52.9]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=75.1, Expect=4e-17]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=73.6, Expect=1e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=70.5, Expect=2e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.5, Expect=2e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.2, Expect=1e-16]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=111, Expect=5e-34]} {RNA1509_38710} {RNA1310_37566} {RNA815_20664}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48596

1.86

Mlig455_017750

Neo: -

Age: logFC(26M/2M)=1.323

LIMA1

Mlig455_017750 {REF} {Length: 1771} {Pfam: LIM domain [PF00412.24, score=52.9]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=75.1, Expect=4e-17]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=73.6, Expect=1e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=70.5, Expect=2e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.5, Expect=2e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.2, Expect=1e-16]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=111, Expect=5e-34]} {RNA1509_38710} {RNA1310_37566} {RNA815_20664}

Cumulative graph for MligTC455_48596

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.851	1.763	0.17446	0.80058
RegionR2	1.356	1.763	0.20347	0.56553
RegionR3	0.94	1.763	0.33262	0.87049
RegionR4	0.525	1.763	0.61844	0.92847
RegionR5	0.957	1.763	0.30407	0.64032
RegionR6	1.76	1.763	0.04042	0.37753
RegionR7	-0.94	1.763	0.98666	1.00000
RegionR8	1.252	1.763	0.34015	0.97393

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.346	1.763	1.00000	1.00000
RegenerationR2	-1.111	1.763	0.04594	0.35423
RegenerationR3	-0.625	1.763	0.37834	0.78966
RegenerationR4	-1.226	1.763	0.14550	0.57141
RegenerationR5	-1.379	1.763	0.04901	0.35779
RegenerationR6	-3.584	1.763	0.00016	0.01174
RegenerationBL	-5.419	1.763	0.01594	0.13339
RegenerationTP	-0.498	1.763	0.70076	1.00000

Genes with expression patterns similar to MligTC455_48596

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48596	89	1.86	Mlig455_017750	Neo: - Age: logFC(26M/2M)=1.323	LIMA1	5	1.000	1.000	1.000	1.000	-	1.000	Mlig455_017750 {REF} {Length: 1771} {Pfam: LIM domain [PF00412.24, score=52.9]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=75.1, Expect=4e-17]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=73.6, Expect=1e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=70.5, Expect=2e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.5, Expect=2e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.2, Expect=1e-16]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=111, Expect=5e-34]} {RNA1509_38710} {RNA1310_37566} {RNA815_20664}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts