TomoSeq data search

Data search

Results for MligTC455_48640

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48640	4332	90.25	Mlig455_058009	Neo: - Age: - Region-enriched R4: 1.312/0.00000		Mlig455_058009 {REF} {Length: 1047} {TRANSSPLICED} {RNA1509_1583, RNA1509_16509} {RNA1310_33179, RNA1509_1583, RNA1509_16509} {RNA1509_1583, RNA1509_16509, RNA815_15253}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_48640

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.659	6.632	0.17241	0.79760
RegionR2	-0.594	6.632	0.00784	0.08642
RegionR3	-0.011	6.632	0.95162	1.00000
RegionR4	1.312	6.632	0.00000	0.00000
RegionR5	0.563	6.632	0.00108	0.01080
RegionR6	0.067	6.632	0.72364	1.00000
RegionR7	-0.256	6.632	0.27514	0.90597
RegionR8	-0.423	6.632	0.14714	0.69892

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.701	6.632	0.33328	1.00000
RegenerationR2	0.255	6.632	0.20250	0.64877
RegenerationR3	-0.02	6.632	0.92435	1.00000
RegenerationR4	-0.25	6.632	0.24799	0.69611
RegenerationR5	-0.193	6.632	0.34102	0.75844
RegenerationR6	0.052	6.632	0.81074	0.98318
RegenerationBL	0.392	6.632	0.07881	0.32775
RegenerationTP	-0.052	6.632	0.84470	1.00000

Genes with expression patterns similar to MligTC455_48640

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48640	4332	90.25	Mlig455_058009	Neo: - Age: - Region-enriched R4: 1.312/0.00000		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058009 {REF} {Length: 1047} {TRANSSPLICED} {RNA1509_1583, RNA1509_16509} {RNA1310_33179, RNA1509_1583, RNA1509_16509} {RNA1509_1583, RNA1509_16509, RNA815_15253}
2.	MligTC455_48418	1248	25.99	Mlig455_041452	Neo: - Age: -	BBS2	1.719	-	-	-	0.981	0.738	-	Mlig455_041452 {REF} {Length: 2772} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=373.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=114.3]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=58.3]; FG-GAP-like repeat [PF13517.8, score=21.3]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [Score=478, Expect=2e-159]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [Score=483, Expect=2e-161]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [Score=280, Expect=3e-84]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [Score=433, Expect=2e-142]} {RNA1509_5656} {RNA1310_6860} {RNA815_2137}
3.	MligTC455_20695	2593	54.02	Mlig455_021752	Neo: - Age: Down-Down-Up	VPS4B	0.957	-	-	-	0.957	-	-	Mlig455_021752 {REF} {Length: 2885} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.6]; Vps4 C terminal oligomerisation domain [PF09336.12, score=97.6]; AAA+ lid domain [PF17862.3, score=35.0]} {Human: ENSG00000119541, VPS4B, vacuolar protein sorting 4 homolog B, [Score=449, Expect=3e-157]; ENSG00000132612, VPS4A, vacuolar protein sorting 4 homolog A, [Score=440, Expect=6e-154]} {Mouse: ENSMUSG00000009907, Vps4b, vacuolar protein sorting 4B, [Score=455, Expect=8e-160]; ENSMUSG00000031913, Vps4a, vacuolar protein sorting 4A, [Score=442, Expect=4e-155]} {Dmel: FBgn0283469, Vps4, Vacuolar protein sorting 4, [Score=439, Expect=1e-153]} {Celegans: WBGene00021334, vps-4, Related to yeast Vacuolar Protein Sorting factor, [Score=410, Expect=8e-143]} {Smed: dd_Smed_v6_1556_0_1, dd_Smed_v6_1556_0_1, [Score=422, Expect=3e-147]} {RNA1509_44980, RNA1509_45761, RNA1509_5023} {RNA1310_8591, RNA1509_44980, RNA1509_45761} {RNA1509_44980, RNA1509_45761, RNA815_2816.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48640

4332

90.25

Mlig455_058009

Neo: -

Age: -

Region-enriched R4: 1.312/0.00000

1.000

Mlig455_058009 {REF} {Length: 1047} {TRANSSPLICED} {RNA1509_1583, RNA1509_16509} {RNA1310_33179, RNA1509_1583, RNA1509_16509} {RNA1509_1583, RNA1509_16509, RNA815_15253}

MligTC455_48418

1248

25.99

Mlig455_041452

Neo: -

Age: -

BBS2

1.719

0.981

0.738

Mlig455_041452 {REF} {Length: 2772} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, C-terminal [PF14782.8, score=373.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=114.3]; Ciliary BBSome complex subunit 2, N-terminal [PF14781.8, score=58.3]; FG-GAP-like repeat [PF13517.8, score=21.3]} {Human: ENSG00000125124, BBS2, Bardet-Biedl syndrome 2, [Score=478, Expect=2e-159]} {Mouse: ENSMUSG00000031755, Bbs2, Bardet-Biedl syndrome 2 (human), [Score=483, Expect=2e-161]} {Celegans: WBGene00000242, bbs-2, Bardet-Biedl syndrome 2 protein homolog, [Score=280, Expect=3e-84]} {Smed: dd_Smed_v6_10186_0_4, dd_Smed_v6_10186_0_4, [Score=433, Expect=2e-142]} {RNA1509_5656} {RNA1310_6860} {RNA815_2137}

MligTC455_20695

2593

54.02

Mlig455_021752

Neo: -

Age: Down-Down-Up

VPS4B

0.957

Mlig455_021752 {REF} {Length: 2885} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.6]; Vps4 C terminal oligomerisation domain [PF09336.12, score=97.6]; AAA+ lid domain [PF17862.3, score=35.0]} {Human: ENSG00000119541, VPS4B, vacuolar protein sorting 4 homolog B, [Score=449, Expect=3e-157]; ENSG00000132612, VPS4A, vacuolar protein sorting 4 homolog A, [Score=440, Expect=6e-154]} {Mouse: ENSMUSG00000009907, Vps4b, vacuolar protein sorting 4B, [Score=455, Expect=8e-160]; ENSMUSG00000031913, Vps4a, vacuolar protein sorting 4A, [Score=442, Expect=4e-155]} {Dmel: FBgn0283469, Vps4, Vacuolar protein sorting 4, [Score=439, Expect=1e-153]} {Celegans: WBGene00021334, vps-4, Related to yeast Vacuolar Protein Sorting factor, [Score=410, Expect=8e-143]} {Smed: dd_Smed_v6_1556_0_1, dd_Smed_v6_1556_0_1, [Score=422, Expect=3e-147]} {RNA1509_44980, RNA1509_45761, RNA1509_5023} {RNA1310_8591, RNA1509_44980, RNA1509_45761} {RNA1509_44980, RNA1509_45761, RNA815_2816.1}