TomoSeq data search

Data search

Results for MligTC455_48814

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48814	3324	69.26	Mlig455_020278	Neo: - Age: Down-Up-Up	HDHD3	Mlig455_020278 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13419.8, score=58.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.5]; HAD-hyrolase-like [PF13242.8, score=27.7]} {Human: ENSG00000119431, HDHD3, haloacid dehalogenase like hydrolase domain containing 3, [RH, Score=85.9, Expect=1e-19]} {Mouse: ENSMUSG00000038422, Hdhd3, haloacid dehalogenase-like hydrolase domain containing 3, [RH, Score=105, Expect=3e-27]} {Dmel: FBgn0016715, Reg-2, Rhythmically expressed gene 2, [RH, Score=90.1, Expect=2e-21]} {Celegans: WBGene00010481, K01G5.10, [RH, Score=94.4, Expect=3e-23]} {RNA1509_17739, RNA1509_5954} {RNA1310_32105, RNA1509_17739, RNA1509_5954} {RNA1509_17739, RNA1509_5954, RNA815_23913}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48814

3324

69.26

Mlig455_020278

Neo: -

Age: Down-Up-Up

HDHD3

Mlig455_020278 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13419.8, score=58.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.5]; HAD-hyrolase-like [PF13242.8, score=27.7]} {Human: ENSG00000119431, HDHD3, haloacid dehalogenase like hydrolase domain containing 3, [RH, Score=85.9, Expect=1e-19]} {Mouse: ENSMUSG00000038422, Hdhd3, haloacid dehalogenase-like hydrolase domain containing 3, [RH, Score=105, Expect=3e-27]} {Dmel: FBgn0016715, Reg-2, Rhythmically expressed gene 2, [RH, Score=90.1, Expect=2e-21]} {Celegans: WBGene00010481, K01G5.10, [RH, Score=94.4, Expect=3e-23]} {RNA1509_17739, RNA1509_5954} {RNA1310_32105, RNA1509_17739, RNA1509_5954} {RNA1509_17739, RNA1509_5954, RNA815_23913}

Cumulative graph for MligTC455_48814

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.998	6.258	0.04016	0.48726
RegionR2	0.4	6.258	0.04739	0.25804
RegionR3	0.406	6.258	0.01190	0.17175
RegionR4	0.294	6.258	0.10102	0.30952
RegionR5	0.65	6.258	0.00001	0.00016
RegionR6	0.314	6.258	0.06111	0.46375
RegionR7	-0.561	6.258	0.01987	0.26148
RegionR8	-0.505	6.258	0.08553	0.55423

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.28	6.258	0.71261	1.00000
RegenerationR2	-0.277	6.258	0.08854	0.47682
RegenerationR3	-0.173	6.258	0.32867	0.75463
RegenerationR4	-0.055	6.258	0.75493	0.97092
RegenerationR5	-0.318	6.258	0.04568	0.34895
RegenerationR6	-0.201	6.258	0.27392	0.62353
RegenerationBL	0.42	6.258	0.06565	0.29853
RegenerationTP	0.438	6.258	0.09444	0.48196

Genes with expression patterns similar to MligTC455_48814

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48814	3324	69.26	Mlig455_020278	Neo: - Age: Down-Up-Up	HDHD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020278 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13419.8, score=58.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.5]; HAD-hyrolase-like [PF13242.8, score=27.7]} {Human: ENSG00000119431, HDHD3, haloacid dehalogenase like hydrolase domain containing 3, [RH, Score=85.9, Expect=1e-19]} {Mouse: ENSMUSG00000038422, Hdhd3, haloacid dehalogenase-like hydrolase domain containing 3, [RH, Score=105, Expect=3e-27]} {Dmel: FBgn0016715, Reg-2, Rhythmically expressed gene 2, [RH, Score=90.1, Expect=2e-21]} {Celegans: WBGene00010481, K01G5.10, [RH, Score=94.4, Expect=3e-23]} {RNA1509_17739, RNA1509_5954} {RNA1310_32105, RNA1509_17739, RNA1509_5954} {RNA1509_17739, RNA1509_5954, RNA815_23913}
2.	MligTC455_19113	2602	54.21	Mlig455_002455, Mlig455_002472, Mlig455_002719	Neo: - Age: logFC(26M/2M)=0.461	TMC7	0.965	-	-	-	-	0.965	-	Mlig455_002455 {REF} {Length: 3546} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=90.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=195, Expect=5e-52]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=197, Expect=4e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.3, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=74.3, Expect=2e-14]} {RNA1509_5830} {RNA1310_394.2} {RNA815_2735} Mlig455_002472 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=91.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=197, Expect=6e-53]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=199, Expect=2e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.7, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=67.8, Expect=2e-11]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=73.9, Expect=3e-14]} {RNA1509_34750, RNA1509_5830} {RNA1310_394.2, RNA1509_34750, RNA1509_5830} {RNA1509_34750, RNA1509_5830, RNA815_2735} Mlig455_002719 {REF} {Length: 2986} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=91.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=197, Expect=6e-53]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=199, Expect=2e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.7, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=67.8, Expect=2e-11]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=73.9, Expect=3e-14]} {RNA1509_38561, RNA1509_5830} {RNA1310_394.4, RNA1509_38561} {RNA1509_38561, RNA815_2735}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48814

3324

69.26

Mlig455_020278

Neo: -

Age: Down-Up-Up

HDHD3

1.000

MligTC455_19113

2602

54.21

Mlig455_002455, Mlig455_002472, Mlig455_002719

Neo: -

Age: logFC(26M/2M)=0.461

TMC7

0.965

Mlig455_002455 {REF} {Length: 3546} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=90.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=195, Expect=5e-52]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=197, Expect=4e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.3, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=74.3, Expect=2e-14]} {RNA1509_5830} {RNA1310_394.2} {RNA815_2735}

Mlig455_002472 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=91.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=197, Expect=6e-53]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=199, Expect=2e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.7, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=67.8, Expect=2e-11]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=73.9, Expect=3e-14]} {RNA1509_34750, RNA1509_5830} {RNA1310_394.2, RNA1509_34750, RNA1509_5830} {RNA1509_34750, RNA1509_5830, RNA815_2735}

Mlig455_002719 {REF} {Length: 2986} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=91.1]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=197, Expect=6e-53]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=199, Expect=2e-53]} {Dmel: FBgn0267796, Tmc, Transmembrane channel-like, [Score=64.7, Expect=4e-10]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=67.8, Expect=2e-11]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=73.9, Expect=3e-14]} {RNA1509_38561, RNA1509_5830} {RNA1310_394.4, RNA1509_38561} {RNA1509_38561, RNA815_2735}