Data search
Results for MligTC455_48842
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48842 | 685 | 14.28 | Mlig455_024744, Mlig455_024751 | Neo: Int S/G2/M Age: - |
RPF1 | Mlig455_024744 {REF} {Length: 1712} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759} Mlig455_024751 {REF} {Length: 93} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34991} {RNA1310_12113.1} {RNA815_12759} |
Cumulative graph for MligTC455_48842
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.953 | 4.143 | 0.31903 | 0.96870 | |
| RegionR2 | 0.172 | 4.143 | 0.72715 | 1.00000 | |
| RegionR3 | -0.287 | 4.143 | 0.45659 | 0.96758 | |
| RegionR4 | -0.717 | 4.143 | 0.12873 | 0.36287 | |
| RegionR5 | 0.604 | 4.143 | 0.06304 | 0.22086 | |
| RegionR6 | 0.23 | 4.143 | 0.54241 | 1.00000 | |
| RegionR7 | -0.384 | 4.143 | 0.47018 | 1.00000 | |
| RegionR8 | -0.57 | 4.143 | 0.41463 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.569 | 4.143 | 0.04251 | 0.67581 | |
| RegenerationR2 | 0.169 | 4.143 | 0.67727 | 0.94789 | |
| RegenerationR3 | 0.765 | 4.143 | 0.08951 | 0.48423 | |
| RegenerationR4 | 0.895 | 4.143 | 0.05149 | 0.36478 | |
| RegenerationR5 | 0.117 | 4.143 | 0.76094 | 0.97584 | |
| RegenerationR6 | 0.197 | 4.143 | 0.65714 | 0.90184 | |
| RegenerationBL | -0.778 | 4.143 | 0.25682 | 0.61391 | |
| RegenerationTP | -0.074 | 4.143 | 0.91022 | 1.00000 |
Genes with expression patterns similar to MligTC455_48842
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48842 | 685 | 14.28 | Mlig455_024744, Mlig455_024751 | Neo: Int S/G2/M Age: - |
RPF1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024744 {REF} {Length: 1712} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759} Mlig455_024751 {REF} {Length: 93} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34991} {RNA1310_12113.1} {RNA815_12759} |
| 2. | MligTC455_08353 | 1648 | 34.34 | Mlig455_017215, Mlig455_017227, Mlig455_048178 | Neo: - Age: logFC(26M/2M)=0.382 Region-enriched R5: 1.213/0.00826 |
APEX1, CPTP | 2.469 | 0.793 | - | - | 0.726 | - | 0.950 | Mlig455_017215 {REF} {Length: 1946} {Pfam: Glycolipid transfer protein (GLTP) [PF08718.13, score=119.6]} {Human: ENSG00000224051, CPTP, ceramide-1-phosphate transfer protein, [RH, Score=135, Expect=7e-39]} {Mouse: ENSMUSG00000029073, Cptp, ceramide-1-phosphate transfer protein, [RH, Score=134, Expect=2e-38]} {Dmel: FBgn0050392, CG30392, [RH, Score=98.2, Expect=9e-25]} {Celegans: WBGene00018632, tag-296, [RH, Score=110, Expect=7e-29]} {Smed: dd_Smed_v6_4270_0_1, dd_Smed_v6_4270_0_1, [RH, Score=113, Expect=5e-31]} {RNA1509_18178} {RNA1310_20513} {RNA815_20813} Mlig455_017227 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.4]; Endonuclease-reverse transcriptase [PF14529.8, score=23.7]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=307, Expect=4e-98]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=311, Expect=1e-99]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=300, Expect=1e-90]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=240, Expect=2e-73]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=340, Expect=5e-111]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1} Mlig455_048178 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=68.1]; Endonuclease-reverse transcriptase [PF14529.8, score=23.0]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=301, Expect=5e-96]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=305, Expect=1e-97]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=296, Expect=2e-89]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=236, Expect=8e-72]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=334, Expect=4e-109]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1} |
| 3. | MligTC455_34440 | 541 | 11.27 | Mlig455_070614 | Neo: - Age: logFC(26M/2M)=0.274 Region-enriched R5: 1.434/0.00019 |
NFYC | 1.742 | 0.788 | - | - | - | - | 0.954 | Mlig455_070614 {REF} {Length: 3080} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=56.0]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=44.6]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=144, Expect=3e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=143, Expect=5e-40]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=128, Expect=5e-33]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=108, Expect=4e-28]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [RH, Score=185, Expect=3e-56]} {RNA1509_29895, RNA1509_35841} {RNA1310_31086, RNA1509_29895, RNA1509_35841} {RNA1509_29895, RNA1509_35841, RNA815_4480} |
| 4. | MligTC455_48207 | 642 | 13.38 | Mlig455_005205 | Neo: - Age: logFC(26M/2M)=0.479 Region-enriched R5: 1.974/0.00560 |
MAP3K15 | 1.668 | - | 0.707 | 0.961 | - | - | - | Mlig455_005205 {REF} {Length: 4073} {TRANSSPLICED} {Pfam: MAP3K TRAFs-binding domain [PF13281.8, score=321.2]; Protein kinase domain [PF00069.27, score=200.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=150.1]} {Human: ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=566, Expect=0.0]} {Mouse: ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=566, Expect=0.0]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=583, Expect=0.0]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=526, Expect=4e-165]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=622, Expect=0.0]} {RNA1509_24869} {RNA1310_2899} {RNA815_1492.1} |
| 5. | MligTC455_43075 | 240 | 4.99 | Mlig455_061847 | Neo: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_061847 {REF} {Length: 2899} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17065, RNA1509_19799} {RNA1509_19799, RNA815_4585} | |
| 6. | MligTC455_18242 | 793 | 16.52 | Mlig455_036957, Mlig455_069821 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.170/0.00028 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_036957 {REF} {Length: 2865} {TRANSSPLICED} {RNA1509_28200, RNA1509_30427} {RNA1310_7386.1, RNA1509_28200, RNA1509_30427} {RNA1509_28200, RNA1509_30427, RNA815_7583} Mlig455_069821 {REF} {Length: 3405} {TRANSSPLICED} {RNA1509_30427} {RNA1310_7386.2} {RNA815_7583} |
|
| 7. | MligTC455_25124 | 192 | 4 | Mlig455_028759 | Neo: Irradiation Age: - |
TRIM2 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_028759 {REF} {Length: 5021} {Pfam: NHL repeat [PF01436.23, score=39.3]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.2, Expect=4e-08]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=85.9, Expect=5e-17]} {RNA1509_23913} {RNA1310_10840} {RNA815_6531} |
| 8. | MligTC455_28865 | 175 | 3.64 | Mlig455_011624 | Neo: - Age: Down-Up-Down |
EHMT1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_011624 {REF} {Length: 4018} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.4]; Ankyrin repeat [PF00023.32, score=56.5]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000181090, EHMT1, euchromatic histone lysine methyltransferase 1, [Score=81.3, Expect=5e-16]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000036893, Ehmt1, euchromatic histone methyltransferase 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=70.1, Expect=2e-12]} {RNA1509_28052} {RNA1310_14237} {RNA815_22032} |
| 9. | MligTC455_48297 | 93 | 1.95 | Mlig455_030211 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_030211 {REF} {Length: 2905} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1640) [PF07798.13, score=18.9]} {RNA1509_50908} {RNA1310_57101} {RNA815_38707} | |
| 10. | MligTC455_49589 | 313 | 6.51 | Mlig455_061113 | Neo: - Age: - |
C20orf27 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_061113 {REF} {Length: 2012} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4517) [PF15006.8, score=130.9]} {Human: ENSG00000101220, C20orf27, chromosome 20 open reading frame 27, [RH, Score=72.8, Expect=3e-16]} {Mouse: ENSMUSG00000027327, 1700037H04Rik, RIKEN cDNA 1700037H04 gene, [RH, Score=73.6, Expect=1e-16]} {Dmel: FBgn0035896, CG6983, [RH, Score=81.3, Expect=9e-20]} {Smed: dd_Smed_v6_7615_0_1, dd_Smed_v6_7615_0_1, [RH, Score=45.1, Expect=1e-06]} {RNA1509_31364, RNA1509_56196} {RNA1310_21975.1, RNA1509_31364} {RNA1509_31364, RNA815_13833} |
| 11. | MligTC455_25697 | 58 | 1.21 | Mlig455_011073, Mlig455_049811 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_011073 {REF} {Length: 1854} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15725} {RNA1310_15694.1} {RNA815_27794} Mlig455_049811 {REF} {Length: 3079} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_33225.1} {RNA815_26884} |