Data search


search
Exact
Search

Results for MligTC455_48865

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48865 22 0.47 Mlig455_007394

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.768

SNX5 Mlig455_007394 {REF} {Length: 3089} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=28.2]} {Human: ENSG00000089006, SNX5, sorting nexin 5, [Score=172, Expect=1e-48]} {Mouse: ENSMUSG00000056185, Snx32, sorting nexin 32, [Score=169, Expect=1e-47]; ENSMUSG00000027423, Snx5, sorting nexin 5, [Score=168, Expect=3e-47]; ENSMUSG00000005656, Snx6, sorting nexin 6, [Score=162, Expect=3e-45]} {Dmel: FBgn0032005, Snx6, Sorting nexin 6, [Score=173, Expect=5e-49]} {Celegans: WBGene00013354, snx-6, Sorting NeXin, [Score=159, Expect=1e-44]} {Smed: dd_Smed_v6_2271_0_1, dd_Smed_v6_2271_0_1, [Score=164, Expect=8e-46]} {RNA1509_48967} {RNA1310_13313} {RNA815_27224}

Cumulative graph for MligTC455_48865

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.774 0.911 0.99997 1.00000
RegionR2 1.995 0.911 0.22000 0.58838
RegionR3 -0.945 0.911 0.85080 1.00000
RegionR4 -0.017 0.911 0.84113 1.00000
RegionR5 0.778 0.911 0.57139 0.93002
RegionR6 1.439 0.911 0.31412 0.90280
RegionR7 0.968 0.911 0.84752 1.00000
RegionR8 -3.443 0.911 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.656 0.911 0.99978 1.00000
RegenerationR2 0.38 0.911 0.31944 0.75790
RegenerationR3 3.847 0.911 0.00575 0.13641
RegenerationR4 0.555 0.911 0.43151 0.83126
RegenerationR5 1.031 0.911 0.09587 0.47419
RegenerationR6 0.578 0.911 0.27367 0.62352
RegenerationBL 1.497 0.911 0.99993 1.00000
RegenerationTP 2.766 0.911 0.09257 0.47795


Genes with expression patterns similar to MligTC455_48865

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48865 22 0.47 Mlig455_007394

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.768

SNX5 2 1.000 - - - - 1.000 Mlig455_007394 {REF} {Length: 3089} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=28.2]} {Human: ENSG00000089006, SNX5, sorting nexin 5, [Score=172, Expect=1e-48]} {Mouse: ENSMUSG00000056185, Snx32, sorting nexin 32, [Score=169, Expect=1e-47]; ENSMUSG00000027423, Snx5, sorting nexin 5, [Score=168, Expect=3e-47]; ENSMUSG00000005656, Snx6, sorting nexin 6, [Score=162, Expect=3e-45]} {Dmel: FBgn0032005, Snx6, Sorting nexin 6, [Score=173, Expect=5e-49]} {Celegans: WBGene00013354, snx-6, Sorting NeXin, [Score=159, Expect=1e-44]} {Smed: dd_Smed_v6_2271_0_1, dd_Smed_v6_2271_0_1, [Score=164, Expect=8e-46]} {RNA1509_48967} {RNA1310_13313} {RNA815_27224}
2. MligTC455_48866 41 0.85 Mlig455_007437

Neo: -

Age: Down-Up-Down

SNX5 0.976 0.976 - - - - - Mlig455_007437 {REF} {Length: 3002} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=28.9]} {Human: ENSG00000089006, SNX5, sorting nexin 5, [Score=171, Expect=3e-48]} {Mouse: ENSMUSG00000056185, Snx32, sorting nexin 32, [Score=167, Expect=5e-47]; ENSMUSG00000027423, Snx5, sorting nexin 5, [Score=167, Expect=6e-47]; ENSMUSG00000005656, Snx6, sorting nexin 6, [Score=161, Expect=9e-45]} {Dmel: FBgn0032005, Snx6, Sorting nexin 6, [Score=171, Expect=4e-48]} {Celegans: WBGene00013354, snx-6, Sorting NeXin, [Score=159, Expect=1e-44]} {Smed: dd_Smed_v6_2271_0_1, dd_Smed_v6_2271_0_1, [Score=162, Expect=4e-45]} {RNA1509_48967} {RNA1310_13313} {RNA815_27224}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA