TomoSeq data search

Data search

Results for MligTC455_48884

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48884	1503	31.32	Mlig455_034082	Neo: - Age: Down-Up-Up	HPCAL1	Mlig455_034082 {REF} {Length: 1012} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=54.5]; EF hand [PF00036.34, score=50.3]; EF-hand domain pair [PF13499.8, score=48.2]; EF-hand domain pair [PF13833.8, score=44.3]; EF hand [PF13202.8, score=36.2]; EF hand [PF14788.8, score=22.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=55.8, Expect=2e-09]} {Mouse: ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=55.8, Expect=2e-09]} {RNA1509_26532, RNA1509_46467} {RNA1310_27424, RNA1509_26532, RNA1509_46467} {RNA1509_26532, RNA1509_46467, RNA815_12924.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48884

1503

31.32

Mlig455_034082

Neo: -

Age: Down-Up-Up

HPCAL1

Mlig455_034082 {REF} {Length: 1012} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=54.5]; EF hand [PF00036.34, score=50.3]; EF-hand domain pair [PF13499.8, score=48.2]; EF-hand domain pair [PF13833.8, score=44.3]; EF hand [PF13202.8, score=36.2]; EF hand [PF14788.8, score=22.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=55.8, Expect=2e-09]} {Mouse: ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=55.8, Expect=2e-09]} {RNA1509_26532, RNA1509_46467} {RNA1310_27424, RNA1509_26532, RNA1509_46467} {RNA1509_26532, RNA1509_46467, RNA815_12924.1}

Cumulative graph for MligTC455_48884

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.043	5.022	0.15481	0.77251
RegionR2	0.091	5.022	0.77596	1.00000
RegionR3	0.081	5.022	0.76447	1.00000
RegionR4	0.166	5.022	0.60234	0.91515
RegionR5	-0.462	5.022	0.09907	0.30307
RegionR6	0.388	5.022	0.15862	0.70960
RegionR7	0.055	5.022	0.87462	1.00000
RegionR8	0.724	5.022	0.06517	0.49398

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.173	5.022	0.87079	1.00000
RegenerationR2	-0.52	5.022	0.06804	0.42566
RegenerationR3	-0.302	5.022	0.33024	0.75614
RegenerationR4	-0.453	5.022	0.14891	0.57647
RegenerationR5	-0.166	5.022	0.60024	0.91019
RegenerationR6	-0.665	5.022	0.03806	0.24343
RegenerationBL	-0.194	5.022	0.55194	0.90866
RegenerationTP	-0.185	5.022	0.60434	0.96340

Genes with expression patterns similar to MligTC455_48884

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48884	1503	31.32	Mlig455_034082	Neo: - Age: Down-Up-Up	HPCAL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034082 {REF} {Length: 1012} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=54.5]; EF hand [PF00036.34, score=50.3]; EF-hand domain pair [PF13499.8, score=48.2]; EF-hand domain pair [PF13833.8, score=44.3]; EF hand [PF13202.8, score=36.2]; EF hand [PF14788.8, score=22.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=55.8, Expect=2e-09]} {Mouse: ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=55.8, Expect=2e-09]} {RNA1509_26532, RNA1509_46467} {RNA1310_27424, RNA1509_26532, RNA1509_46467} {RNA1509_26532, RNA1509_46467, RNA815_12924.1}
2.	MligTC455_44595	1521	31.68	Mlig455_044563	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.540	SOX14	1.807	-	-	-	0.964	-	0.843	Mlig455_044563 {REF} {Length: 2337} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=89.4]; HMG-box domain [PF09011.12, score=39.3]} {Human: ENSG00000168875, SOX14, SRY-box 14, [Score=108, Expect=2e-27]; ENSG00000125285, SOX21, SRY-box 21, [Score=108, Expect=4e-27]; ENSG00000181449, SOX2, SRY-box 2, [Score=108, Expect=5e-27]; ENSG00000182968, SOX1, SRY-box 1, [Score=107, Expect=6e-26]; ENSG00000005513, SOX8, SRY-box 8, [Score=106, Expect=2e-25]; ENSG00000134595, SOX3, SRY-box 3, [Score=106, Expect=2e-25]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=108, Expect=3e-27]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=108, Expect=2e-27]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=108, Expect=1e-27]; ENSMUSG00000024176, Sox8, SRY (sex determining region Y)-box 8, [Score=107, Expect=7e-26]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=107, Expect=4e-26]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=106, Expect=1e-25]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=104, Expect=2e-26]} {Dmel: FBgn0000411, D, dachs, [Score=115, Expect=3e-29]} {Celegans: WBGene00015716, sox-4, SOX (Mammalian SRY box) family, [RH, Score=106, Expect=2e-27]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=111, Expect=2e-27]} {RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1310_8726.1, RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1509_30566, RNA1509_37296, RNA1509_44654, RNA815_5231}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48884

1503

31.32

Mlig455_034082

Neo: -

Age: Down-Up-Up

HPCAL1

1.000

MligTC455_44595

1521

31.68

Mlig455_044563

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.540

SOX14

1.807

0.964

0.843

Mlig455_044563 {REF} {Length: 2337} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=89.4]; HMG-box domain [PF09011.12, score=39.3]} {Human: ENSG00000168875, SOX14, SRY-box 14, [Score=108, Expect=2e-27]; ENSG00000125285, SOX21, SRY-box 21, [Score=108, Expect=4e-27]; ENSG00000181449, SOX2, SRY-box 2, [Score=108, Expect=5e-27]; ENSG00000182968, SOX1, SRY-box 1, [Score=107, Expect=6e-26]; ENSG00000005513, SOX8, SRY-box 8, [Score=106, Expect=2e-25]; ENSG00000134595, SOX3, SRY-box 3, [Score=106, Expect=2e-25]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=108, Expect=3e-27]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=108, Expect=2e-27]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=108, Expect=1e-27]; ENSMUSG00000024176, Sox8, SRY (sex determining region Y)-box 8, [Score=107, Expect=7e-26]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=107, Expect=4e-26]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=106, Expect=1e-25]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=104, Expect=2e-26]} {Dmel: FBgn0000411, D, dachs, [Score=115, Expect=3e-29]} {Celegans: WBGene00015716, sox-4, SOX (Mammalian SRY box) family, [RH, Score=106, Expect=2e-27]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=111, Expect=2e-27]} {RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1310_8726.1, RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1509_30566, RNA1509_37296, RNA1509_44654, RNA815_5231}