Data search


search
Exact
Search

Results for MligTC455_48989

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48989 411 8.57 Mlig455_066103

Neo: -

Age: -

ANKRD50 Mlig455_066103 {REF} {Length: 6623} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=214.9]; Ankyrin repeats (many copies) [PF13637.8, score=190.1]; Protein kinase domain [PF00069.27, score=182.5]; Ankyrin repeats (many copies) [PF13857.8, score=149.6]; Ankyrin repeat [PF13606.8, score=138.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.0]; Ankyrin repeat [PF00023.32, score=126.1]; ABC1 atypical kinase-like domain [PF03109.18, score=35.9]; Fungal protein kinase [PF17667.3, score=28.5]; Kinase-like [PF14531.8, score=23.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=183, Expect=7e-47]; ENSG00000145362, ANK2, ankyrin 2, [Score=179, Expect=1e-45]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=172, Expect=2e-43]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=164, Expect=3e-41]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=153, Expect=1e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=149, Expect=1e-36]} {Smed: dd_Smed_v6_11663_0_2, dd_Smed_v6_11663_0_2, [RH, Score=191, Expect=2e-51]} {RNA1509_2406} {RNA1310_2747} {RNA815_2044}

Cumulative graph for MligTC455_48989

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.032 3.543 0.98324 1.00000
RegionR2 -0.093 3.543 0.85691 1.00000
RegionR3 0.53 3.543 0.18510 0.71941
RegionR4 0.664 3.543 0.19256 0.46904
RegionR5 -0.409 3.543 0.31627 0.65666
RegionR6 0.207 3.543 0.62357 1.00000
RegionR7 -0.722 3.543 0.24357 0.86985
RegionR8 -0.146 3.543 0.83397 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.209 3.543 0.20100 0.94083
RegenerationR2 -0.483 3.543 0.25996 0.70650
RegenerationR3 -0.579 3.543 0.19637 0.63175
RegenerationR4 -0.557 3.543 0.24203 0.69055
RegenerationR5 -0.429 3.543 0.34694 0.76169
RegenerationR6 -0.408 3.543 0.39734 0.73562
RegenerationBL -0.216 3.543 0.73955 1.00000
RegenerationTP -0.075 3.543 0.91115 1.00000


Genes with expression patterns similar to MligTC455_48989

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48989 411 8.57 Mlig455_066103

Neo: -

Age: -

ANKRD50 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066103 {REF} {Length: 6623} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=214.9]; Ankyrin repeats (many copies) [PF13637.8, score=190.1]; Protein kinase domain [PF00069.27, score=182.5]; Ankyrin repeats (many copies) [PF13857.8, score=149.6]; Ankyrin repeat [PF13606.8, score=138.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.0]; Ankyrin repeat [PF00023.32, score=126.1]; ABC1 atypical kinase-like domain [PF03109.18, score=35.9]; Fungal protein kinase [PF17667.3, score=28.5]; Kinase-like [PF14531.8, score=23.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=183, Expect=7e-47]; ENSG00000145362, ANK2, ankyrin 2, [Score=179, Expect=1e-45]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=172, Expect=2e-43]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=164, Expect=3e-41]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=153, Expect=1e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=149, Expect=1e-36]} {Smed: dd_Smed_v6_11663_0_2, dd_Smed_v6_11663_0_2, [RH, Score=191, Expect=2e-51]} {RNA1509_2406} {RNA1310_2747} {RNA815_2044}
2. MligTC455_44965 243 5.07 Mlig455_038659

Neo: Int S/G2/M

Age: Up-Down-Up

VCPKMT 1.659 - - - - 0.954 0.705 Mlig455_038659 {REF} {Length: 878} {TRANSSPLICED} {Pfam: Lysine methyltransferase [PF10294.11, score=97.3]} {Human: ENSG00000100483, VCPKMT, valosin containing protein lysine methyltransferase, [Score=89.4, Expect=6e-21]} {Mouse: ENSMUSG00000049882, Vcpkmt, valosin containing protein lysine (K) methyltransferase, [RH, Score=96.3, Expect=1e-23]} {Celegans: WBGene00016591, C42C1.13, Protein-lysine methyltransferase C42C1.13, [RH, Score=99.4, Expect=2e-25]} {Smed: dd_Smed_v6_7520_0_1, dd_Smed_v6_7520_0_1, [Score=54.7, Expect=6e-09]} {RNA1509_23981, RNA1509_32981, RNA1509_59245} {RNA1310_31753, RNA1509_23981, RNA1509_32981, RNA1509_59245} {RNA1509_23981, RNA1509_32981, RNA1509_59245, RNA815_16503}
3. MligTC455_35129 445 9.27 Mlig455_021818

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.554

Regeneration-downregulated R2: -1.936

Regeneration-depleted R2: -1.936

TTLL2 0.976 - - - - 0.976 - Mlig455_021818 {REF} {Length: 3696} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=228.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=21.7]; YheC/D like ATP-grasp [PF14398.8, score=20.9]} {Human: ENSG00000120440, TTLL2, tubulin tyrosine ligase like 2, [RH, Score=330, Expect=7e-103]} {Mouse: ENSMUSG00000079722, Ttll2, tubulin tyrosine ligase-like family, member 2, [RH, Score=323, Expect=4e-101]} {Dmel: FBgn0051108, CG31108, [Score=206, Expect=2e-55]} {Celegans: WBGene00008331, ttll-5, Tubulin Tyrosine Ligase Like, [Score=192, Expect=9e-52]} {Smed: dd_Smed_v6_6390_0_2, dd_Smed_v6_6390_0_2, [Score=218, Expect=2e-59]} {RNA1509_45879, RNA1509_46017, RNA1509_5384} {RNA1310_3598, RNA1509_45879, RNA1509_46017, RNA1509_5384} {RNA1509_45879, RNA1509_46017, RNA1509_5384, RNA815_5905}
4. MligTC455_27840 1247 25.98 Mlig455_029797

Neo: -

Age: -

0.969 - - - 0.969 - - Mlig455_029797 {REF} {Length: 5590} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_11456, RNA1509_21319, RNA1509_24163} {RNA1310_131.1, RNA1509_11456, RNA1509_21319} {RNA1509_11456, RNA1509_21319, RNA815_52.1}
5. MligTC455_24520 255 5.3 Mlig455_026510

Neo: -

Age: Up-Down-Down

DNAH10 0.968 - - - - 0.968 - Mlig455_026510 {REF} {Length: 13148} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=432.5]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=367.7]; P-loop containing dynein motor region D4 [PF12780.9, score=341.6]; ATP-binding dynein motor region [PF12781.9, score=282.3]; P-loop containing dynein motor region [PF12775.9, score=262.5]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.2]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=141.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=124.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=82.7]; AAA+ lid domain [PF17857.3, score=62.7]; AAA domain [PF13401.8, score=38.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.5]; AAA ATPase domain [PF13191.8, score=26.3]; AAA domain [PF13238.8, score=23.3]; Sigma-54 interaction domain [PF14532.8, score=20.3]; Sigma-54 interaction domain [PF00158.28, score=20.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.8]} {Human: ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [RH, Score=5142, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [RH, Score=5333, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3887, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [Score=4445, Expect=0.0]} {RNA1509_2715} {RNA1310_40.1} {RNA815_20}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA