Data search


search
Exact
Search

Results for MligTC455_49108

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49108 10 0.21 Mlig455_031726

Neo: -

Age: -

Mlig455_031726 {REF} {Length: 1203} {RNA1509_19235} {RNA1310_43931} {RNA815_16592}

Cumulative graph for MligTC455_49108

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.002 0.616 1.00000 1.00000
RegionR2 0.947 0.616 0.99996 1.00000
RegionR3 -0.359 0.616 0.99994 1.00000
RegionR4 -1.446 0.616 0.99984 1.00000
RegionR5 -1.151 0.616 0.99994 1.00000
RegionR6 -0.864 0.616 0.99997 1.00000
RegionR7 0.915 0.616 0.99999 1.00000
RegionR8 1.956 0.616 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.135 0.616 1.00000 1.00000
RegenerationR2 0.99 0.616 0.99994 1.00000
RegenerationR3 1.68 0.616 1.00000 1.00000
RegenerationR4 -0.749 0.616 0.99992 1.00000
RegenerationR5 1.191 0.616 0.99967 1.00000
RegenerationR6 2.056 0.616 0.99956 1.00000
RegenerationBL -2.497 0.616 0.99994 1.00000
RegenerationTP -1.424 0.616 0.99994 1.00000


Genes with expression patterns similar to MligTC455_49108

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49108 10 0.21 Mlig455_031726

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_031726 {REF} {Length: 1203} {RNA1509_19235} {RNA1310_43931} {RNA815_16592}
2. MligTC455_11482 15 0.32 Mlig455_039037

Neo: -

Age: -

Region-enriched R2: 11.106/0.00015

AVP 0.963 - - - - 0.963 - Mlig455_039037 {REF} {Length: 788} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=52.2]} {Human: ENSG00000101200, AVP, arginine vasopressin, [Score=50.8, Expect=5e-08]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=54.3, Expect=2e-09]} {RNA1310_49297} {RNA815_45968}
3. MligTC455_07101 46 0.96 Mlig455_062761

Neo: -

Age: Down-Up-Down

POU4F1 0.961 - - - - 0.961 - Mlig455_062761 {REF} {Length: 2816} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=7e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=266, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=265, Expect=3e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=4e-75]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=5e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA