TomoSeq data search

Data search

Results for MligTC455_49132

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49132	155	3.24	Mlig455_000896	Neo: - Age: -	PTPRJ	Mlig455_000896 {REF} {Length: 3112} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=230.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=23.8]; Tyrosine phosphatase family [PF13350.8, score=21.9]} {Human: ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=224, Expect=4e-60]} {Mouse: ENSMUSG00000025314, Ptprj, protein tyrosine phosphatase, receptor type, J, [Score=221, Expect=2e-59]; ENSMUSG00000035429, Ptprh, protein tyrosine phosphatase, receptor type, H, [Score=211, Expect=3e-56]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=192, Expect=7e-50]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [RH, Score=198, Expect=4e-55]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=195, Expect=3e-51]} {RNA1509_31009} {RNA1310_5815.1} {RNA815_24913}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49132

155

3.24

Mlig455_000896

Neo: -

Age: -

PTPRJ

Mlig455_000896 {REF} {Length: 3112} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=230.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=23.8]; Tyrosine phosphatase family [PF13350.8, score=21.9]} {Human: ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=224, Expect=4e-60]} {Mouse: ENSMUSG00000025314, Ptprj, protein tyrosine phosphatase, receptor type, J, [Score=221, Expect=2e-59]; ENSMUSG00000035429, Ptprh, protein tyrosine phosphatase, receptor type, H, [Score=211, Expect=3e-56]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=192, Expect=7e-50]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [RH, Score=198, Expect=4e-55]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=195, Expect=3e-51]} {RNA1509_31009} {RNA1310_5815.1} {RNA815_24913}

Cumulative graph for MligTC455_49132

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.476	2.296	0.37887	1.00000
RegionR2	2.186	2.296	0.02309	0.16844
RegionR3	0.832	2.296	0.39822	0.92768
RegionR4	-0.87	2.296	0.98397	1.00000
RegionR5	-0.754	2.296	0.97848	1.00000
RegionR6	1.397	2.296	0.12354	0.64054
RegionR7	0.764	2.296	0.57072	1.00000
RegionR8	0.921	2.296	0.57790	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.199	2.296	0.99998	1.00000
RegenerationR2	-0.419	2.296	0.43491	0.83736
RegenerationR3	0.334	2.296	0.63640	0.92343
RegenerationR4	1.72	2.296	0.01905	0.21642
RegenerationR5	1.46	2.296	0.03539	0.31270
RegenerationR6	1.027	2.296	0.09893	0.39064
RegenerationBL	1.177	2.296	0.17261	0.49786
RegenerationTP	1.46	2.296	0.14360	0.56496

Genes with expression patterns similar to MligTC455_49132

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49132	155	3.24	Mlig455_000896	Neo: - Age: -	PTPRJ	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000896 {REF} {Length: 3112} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=230.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=23.8]; Tyrosine phosphatase family [PF13350.8, score=21.9]} {Human: ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=224, Expect=4e-60]} {Mouse: ENSMUSG00000025314, Ptprj, protein tyrosine phosphatase, receptor type, J, [Score=221, Expect=2e-59]; ENSMUSG00000035429, Ptprh, protein tyrosine phosphatase, receptor type, H, [Score=211, Expect=3e-56]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=192, Expect=7e-50]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [RH, Score=198, Expect=4e-55]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=195, Expect=3e-51]} {RNA1509_31009} {RNA1310_5815.1} {RNA815_24913}
2.	MligTC455_29277	386	8.05	Mlig455_061649	Neo: - Age: logFC(26M/2M)=0.559	CYP3A7-CYP3A51P	1.692	-	-	-	-	0.730	0.962	Mlig455_061649 {REF} {Length: 3908} {Pfam: Cytochrome P450 [PF00067.24, score=300.3]} {Human: ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=268, Expect=5e-83]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=268, Expect=1e-83]; ENSG00000021461, CYP3A43, cytochrome P450 family 3 subfamily A member 43, [Score=261, Expect=1e-80]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=258, Expect=9e-80]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=265, Expect=2e-82]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=254, Expect=3e-78]; ENSMUSG00000029630, Cyp3a25, cytochrome P450, family 3, subfamily a, polypeptide 25, [Score=253, Expect=8e-78]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=252, Expect=2e-77]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=252, Expect=2e-77]; ENSMUSG00000061292, Cyp3a59, cytochrome P450, family 3, subfamily a, polypeptide 59, [Score=252, Expect=2e-77]} {Dmel: FBgn0013772, Cyp6a8, Cytochrome P450-6a8, [RH, Score=224, Expect=9e-67]} {Celegans: WBGene00011676, cyp-13A2, Putative cytochrome P450 CYP13A2, [Score=207, Expect=1e-60]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=305, Expect=4e-98]} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA1509_4674} {RNA1310_15246, RNA1509_21289, RNA1509_23611, RNA1509_42440} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA815_7045}
3.	MligTC455_42331	430	8.96	Mlig455_068414	Neo: - Age: - Region-enriched R4: 1.748/0.01237		0.961	-	-	-	-	0.961	-	Mlig455_068414 {REF} {Length: 2658} {Smed: dd_Smed_v6_6469_0_1, dd_Smed_v6_6469_0_1, [Score=141, Expect=7e-37]} {RNA1509_22744} {RNA1310_6583.1} {RNA815_5360.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49132

155

3.24

Mlig455_000896

Neo: -

Age: -

PTPRJ

1.000

MligTC455_29277

386

8.05

Mlig455_061649

Neo: -

Age: logFC(26M/2M)=0.559

CYP3A7-CYP3A51P

1.692

0.730

0.962

Mlig455_061649 {REF} {Length: 3908} {Pfam: Cytochrome P450 [PF00067.24, score=300.3]} {Human: ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=268, Expect=5e-83]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=268, Expect=1e-83]; ENSG00000021461, CYP3A43, cytochrome P450 family 3 subfamily A member 43, [Score=261, Expect=1e-80]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=258, Expect=9e-80]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=265, Expect=2e-82]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=254, Expect=3e-78]; ENSMUSG00000029630, Cyp3a25, cytochrome P450, family 3, subfamily a, polypeptide 25, [Score=253, Expect=8e-78]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=252, Expect=2e-77]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=252, Expect=2e-77]; ENSMUSG00000061292, Cyp3a59, cytochrome P450, family 3, subfamily a, polypeptide 59, [Score=252, Expect=2e-77]} {Dmel: FBgn0013772, Cyp6a8, Cytochrome P450-6a8, [RH, Score=224, Expect=9e-67]} {Celegans: WBGene00011676, cyp-13A2, Putative cytochrome P450 CYP13A2, [Score=207, Expect=1e-60]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=305, Expect=4e-98]} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA1509_4674} {RNA1310_15246, RNA1509_21289, RNA1509_23611, RNA1509_42440} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA815_7045}

MligTC455_42331

430

8.96

Mlig455_068414

Neo: -

Age: -

Region-enriched R4: 1.748/0.01237

0.961

Mlig455_068414 {REF} {Length: 2658} {Smed: dd_Smed_v6_6469_0_1, dd_Smed_v6_6469_0_1, [Score=141, Expect=7e-37]} {RNA1509_22744} {RNA1310_6583.1} {RNA815_5360.1}