Data search
Results for MligTC455_49218
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49218 | 489 | 10.18 | Mlig455_050876, Mlig455_067842 | Neo: - Age: - |
CLOCK | Mlig455_050876 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: PAS fold [PF08447.14, score=51.1]; PAS domain [PF14598.8, score=38.5]; Helix-loop-helix DNA-binding domain [PF00010.28, score=25.1]; PAS fold [PF08448.12, score=19.7]} {Human: ENSG00000134852, CLOCK, clock circadian regulator, [RH, Score=139, Expect=2e-34]; ENSG00000170485, NPAS2, neuronal PAS domain protein 2, [RH, Score=133, Expect=2e-32]} {Mouse: ENSMUSG00000029238, Clock, circadian locomotor output cycles kaput, [RH, Score=140, Expect=9e-35]} {Dmel: FBgn0023076, Clk, Clock, [RH, Score=155, Expect=3e-40]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=83.6, Expect=5e-17]} {RNA1509_22734} {RNA1310_20118} {RNA815_29296} Mlig455_067842 {REF} {Length: 2440} {TRANSSPLICED} {Pfam: PAS fold [PF08447.14, score=51.1]; PAS domain [PF14598.8, score=38.6]; Helix-loop-helix DNA-binding domain [PF00010.28, score=25.1]; PAS fold [PF08448.12, score=19.7]} {Human: ENSG00000134852, CLOCK, clock circadian regulator, [RH, Score=139, Expect=3e-34]; ENSG00000170485, NPAS2, neuronal PAS domain protein 2, [RH, Score=133, Expect=2e-32]} {Mouse: ENSMUSG00000029238, Clock, circadian locomotor output cycles kaput, [RH, Score=140, Expect=8e-35]} {Dmel: FBgn0023076, Clk, Clock, [RH, Score=158, Expect=6e-41]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=84.3, Expect=3e-17]} {RNA1509_22734} {RNA1310_20118, RNA1509_22734} {RNA1509_22734, RNA815_29296} |
Cumulative graph for MligTC455_49218
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.439 | 3.681 | 0.74974 | 1.00000 | |
| RegionR2 | 0.717 | 3.681 | 0.32159 | 0.71314 | |
| RegionR3 | -0.102 | 3.681 | 0.87738 | 1.00000 | |
| RegionR4 | 1.271 | 3.681 | 0.06842 | 0.23856 | |
| RegionR5 | 0.409 | 3.681 | 0.49024 | 0.85357 | |
| RegionR6 | 0.436 | 3.681 | 0.47862 | 1.00000 | |
| RegionR7 | -0.403 | 3.681 | 0.59359 | 1.00000 | |
| RegionR8 | -1.889 | 3.681 | 0.06625 | 0.49648 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.676 | 3.681 | 0.13605 | 0.87134 | |
| RegenerationR2 | -0.09 | 3.681 | 0.89448 | 1.00000 | |
| RegenerationR3 | 0.781 | 3.681 | 0.28920 | 0.72124 | |
| RegenerationR4 | -0.179 | 3.681 | 0.81283 | 0.99046 | |
| RegenerationR5 | 0.711 | 3.681 | 0.30994 | 0.73613 | |
| RegenerationR6 | -0.719 | 3.681 | 0.35573 | 0.70075 | |
| RegenerationBL | 1.09 | 3.681 | 0.15751 | 0.47510 | |
| RegenerationTP | 0.963 | 3.681 | 0.28535 | 0.73204 |
Genes with expression patterns similar to MligTC455_49218
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49218 | 489 | 10.18 | Mlig455_050876, Mlig455_067842 | Neo: - Age: - |
CLOCK | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050876 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: PAS fold [PF08447.14, score=51.1]; PAS domain [PF14598.8, score=38.5]; Helix-loop-helix DNA-binding domain [PF00010.28, score=25.1]; PAS fold [PF08448.12, score=19.7]} {Human: ENSG00000134852, CLOCK, clock circadian regulator, [RH, Score=139, Expect=2e-34]; ENSG00000170485, NPAS2, neuronal PAS domain protein 2, [RH, Score=133, Expect=2e-32]} {Mouse: ENSMUSG00000029238, Clock, circadian locomotor output cycles kaput, [RH, Score=140, Expect=9e-35]} {Dmel: FBgn0023076, Clk, Clock, [RH, Score=155, Expect=3e-40]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=83.6, Expect=5e-17]} {RNA1509_22734} {RNA1310_20118} {RNA815_29296} Mlig455_067842 {REF} {Length: 2440} {TRANSSPLICED} {Pfam: PAS fold [PF08447.14, score=51.1]; PAS domain [PF14598.8, score=38.6]; Helix-loop-helix DNA-binding domain [PF00010.28, score=25.1]; PAS fold [PF08448.12, score=19.7]} {Human: ENSG00000134852, CLOCK, clock circadian regulator, [RH, Score=139, Expect=3e-34]; ENSG00000170485, NPAS2, neuronal PAS domain protein 2, [RH, Score=133, Expect=2e-32]} {Mouse: ENSMUSG00000029238, Clock, circadian locomotor output cycles kaput, [RH, Score=140, Expect=8e-35]} {Dmel: FBgn0023076, Clk, Clock, [RH, Score=158, Expect=6e-41]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=84.3, Expect=3e-17]} {RNA1509_22734} {RNA1310_20118, RNA1509_22734} {RNA1509_22734, RNA815_29296} |
| 2. | MligTC455_23643 | 406 | 8.46 | Mlig455_067289 | Neo: - Age: Down-Up-Up |
STK33 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_067289 {REF} {Length: 2596} {Pfam: Protein kinase domain [PF00069.27, score=206.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.3]} {Human: ENSG00000130413, STK33, serine/threonine kinase 33, [Score=184, Expect=7e-53]} {Mouse: ENSMUSG00000031027, Stk33, serine/threonine kinase 33, [Score=190, Expect=4e-55]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=137, Expect=2e-36]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=129, Expect=5e-34]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [RH, Score=231, Expect=1e-72]} {RNA1509_36009} {RNA1310_11665} {RNA815_6928} |