TomoSeq data search

Data search

Results for MligTC455_49236

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49236

162

3.37

Mlig455_041251

Neo: -

Age: Down-Down-Up

CAMK4

Mlig455_041251 {REF} {Length: 3071} {Pfam: Protein kinase domain [PF00069.27, score=263.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.7]; Fungal protein kinase [PF17667.3, score=24.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000152495, CAMK4, calcium/calmodulin dependent protein kinase IV, [Score=350, Expect=5e-118]} {Mouse: ENSMUSG00000038128, Camk4, calcium/calmodulin-dependent protein kinase IV, [Score=353, Expect=4e-119]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=248, Expect=3e-79]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=244, Expect=1e-78]} {Smed: dd_Smed_v6_10731_0_1, dd_Smed_v6_10731_0_1, [Score=356, Expect=3e-122]} {RNA1509_27017} {RNA1310_11195.2} {RNA815_9103.1}

Cumulative graph for MligTC455_49236

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.532	2.494	1.00000	1.00000
RegionR2	2.996	2.494	0.00623	0.07421
RegionR3	2.046	2.494	0.03526	0.32552
RegionR4	1.781	2.494	0.11667	0.34085
RegionR5	1.293	2.494	0.20793	0.50266
RegionR6	1.469	2.494	0.18350	0.74785
RegionR7	-0.38	2.494	0.85321	1.00000
RegionR8	-4.673	2.494	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.314	2.494	0.19124	0.93000
RegenerationR2	0.14	2.494	0.78685	0.98546
RegenerationR3	-0.568	2.494	0.40016	0.80265
RegenerationR4	-0.809	2.494	0.28003	0.72495
RegenerationR5	-0.377	2.494	0.55117	0.88643
RegenerationR6	-0.058	2.494	0.93544	1.00000
RegenerationBL	1.59	2.494	0.36089	0.72982
RegenerationTP	2.383	2.494	0.29963	0.74509

Genes with expression patterns similar to MligTC455_49236

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49236	162	3.37	Mlig455_041251	Neo: - Age: Down-Down-Up	CAMK4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041251 {REF} {Length: 3071} {Pfam: Protein kinase domain [PF00069.27, score=263.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.7]; Fungal protein kinase [PF17667.3, score=24.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000152495, CAMK4, calcium/calmodulin dependent protein kinase IV, [Score=350, Expect=5e-118]} {Mouse: ENSMUSG00000038128, Camk4, calcium/calmodulin-dependent protein kinase IV, [Score=353, Expect=4e-119]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=248, Expect=3e-79]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=244, Expect=1e-78]} {Smed: dd_Smed_v6_10731_0_1, dd_Smed_v6_10731_0_1, [Score=356, Expect=3e-122]} {RNA1509_27017} {RNA1310_11195.2} {RNA815_9103.1}
2.	MligTC455_08551	88	1.82	Mlig455_024773	Neo: - Age: -		1.704	-	-	-	0.951	0.753	-	Mlig455_024773 {REF} {Length: 512}
3.	MligTC455_32428	352	7.33	Mlig455_013946	Neo: - Age: -	NWD2	1.663	-	-	0.713	-	0.950	-	Mlig455_013946 {REF} {Length: 7112} {TRANSSPLICED} {Pfam: NACHT domain [PF05729.14, score=45.6]; AAA ATPase domain [PF13191.8, score=41.4]; Domain of unknown function (DUF4062) [PF13271.8, score=40.6]; AAA domain [PF13401.8, score=24.5]; ATPase domain predominantly from Archaea [PF01637.20, score=20.2]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=431, Expect=4e-131]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=426, Expect=2e-129]} {Dmel: FBgn0038397, CG10185, [Score=520, Expect=4e-164]} {Celegans: WBGene00020254, T05C3.2, [Score=530, Expect=2e-167]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=323, Expect=7e-94]} {RNA1509_3054} {RNA1310_322} {RNA815_139.1}
4.	MligTC455_28980	279	5.82	Mlig455_044817	Neo: - Age: logFC(26M/2M)=0.447	PTPRT	0.968	-	-	-	-	0.968	-	Mlig455_044817 {REF} {Length: 10717} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=270.2]; Fibronectin type III domain [PF00041.23, score=65.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=18.8]} {Human: ENSG00000196090, PTPRT, protein tyrosine phosphatase, receptor type T, [Score=270, Expect=6e-73]} {Mouse: ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=268, Expect=2e-72]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=257, Expect=7e-69]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [Score=207, Expect=1e-53]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=169, Expect=1e-41]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=201, Expect=8e-52]} {RNA1509_2576} {RNA1310_671.1, RNA1509_2576} {RNA1509_2576, RNA815_239}
5.	MligTC455_31867	118	2.46	Mlig455_015324	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_015324 {REF} {Length: 4165} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=18.7]} {RNA1509_44743, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1310_5450.1, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1509_45704, RNA1509_45713, RNA1509_55716, RNA815_16253.2}
6.	MligTC455_21542	450	9.38	Mlig455_048019	Neo: - Age: -	TBC1D32	0.95	-	-	-	-	0.950	-	Mlig455_048019 {REF} {Length: 4789} {TRANSSPLICED} {Pfam: Broad-minded protein [PF14961.8, score=920.1]} {Human: ENSG00000146350, TBC1D32, TBC1 domain family member 32, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000038122, Tbc1d32, TBC1 domain family, member 32, [RH, Score=639, Expect=0.0]} {Smed: dd_Smed_v6_16049_0_1, dd_Smed_v6_16049_0_1, [RH, Score=506, Expect=5e-157]} {RNA1509_53921, RNA1509_6706} {RNA1310_1384, RNA1509_53921} {RNA1509_53921, RNA815_17065}

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