Data search


search
Exact
Search

Results for MligTC455_49297

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49297 6781 141.28 Mlig455_050927, Mlig455_050943

Neo: -

Age: logFC(26M/2M)=-0.624

Regeneration-downregulated BL: -1.016

Regeneration-depleted BL: -1.016

CALM2

Mlig455_050927 {REF} {Length: 1816} {Pfam: EF-hand domain pair [PF13499.8, score=84.8]; EF hand [PF00036.34, score=76.0]; EF-hand domain [PF13405.8, score=67.8]; EF-hand domain pair [PF13833.8, score=48.5]; EF hand [PF13202.8, score=47.4]; EF-hand domain [PF14658.8, score=27.5]; EF-hand domain [PF08976.13, score=23.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=23.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.2]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=89.7, Expect=1e-20]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=84.3, Expect=7e-19]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=82.4, Expect=1e-18]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=82.4, Expect=1e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=82.4, Expect=8e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=82.8, Expect=4e-19]} {RNA1509_2797, RNA1509_44715} {RNA1310_28282, RNA1509_2797, RNA1509_44715} {RNA1509_2797, RNA1509_44715, RNA815_7033}

Mlig455_050943 {REF} {Length: 1699} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=85.3]; EF hand [PF00036.34, score=77.0]; EF-hand domain [PF13405.8, score=69.1]; EF-hand domain pair [PF13833.8, score=49.3]; EF hand [PF13202.8, score=48.2]; EF-hand domain [PF14658.8, score=28.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.3]; EF-hand domain [PF08976.13, score=24.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.7]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=86.3, Expect=1e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=82.8, Expect=7e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=82.4, Expect=1e-18]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=84.0, Expect=4e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=82.4, Expect=7e-19]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=82.4, Expect=7e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=82.4, Expect=4e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.8, Expect=3e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=82.8, Expect=2e-19]} {RNA1509_4136, RNA1509_44715} {RNA1310_28282, RNA1509_4136} {RNA1509_4136, RNA815_7033}

Cumulative graph for MligTC455_49297

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.895 7.258 0.03896 0.48209
RegionR2 -0.044 7.258 0.86051 1.00000
RegionR3 0.492 7.258 0.01764 0.21903
RegionR4 0.789 7.258 0.00097 0.01014
RegionR5 -0.115 7.258 0.58447 0.94278
RegionR6 0.12 7.258 0.57433 1.00000
RegionR7 -0.132 7.258 0.56724 1.00000
RegionR8 -0.214 7.258 0.40982 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.842 7.258 0.17606 0.91844
RegenerationR2 -0.102 7.258 0.69029 0.95293
RegenerationR3 -0.352 7.258 0.18565 0.62210
RegenerationR4 -0.417 7.258 0.12651 0.54061
RegenerationR5 -0.165 7.258 0.53646 0.87766
RegenerationR6 -0.655 7.258 0.01612 0.15707
RegenerationBL -1.016 7.258 0.00017 0.00665 Specific for BL: -1.016
RegenerationTP -0.428 7.258 0.12371 0.53372


Genes with expression patterns similar to MligTC455_49297

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49297 6781 141.28 Mlig455_050927, Mlig455_050943

Neo: -

Age: logFC(26M/2M)=-0.624

Regeneration-downregulated BL: -1.016

Regeneration-depleted BL: -1.016

CALM2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_050927 {REF} {Length: 1816} {Pfam: EF-hand domain pair [PF13499.8, score=84.8]; EF hand [PF00036.34, score=76.0]; EF-hand domain [PF13405.8, score=67.8]; EF-hand domain pair [PF13833.8, score=48.5]; EF hand [PF13202.8, score=47.4]; EF-hand domain [PF14658.8, score=27.5]; EF-hand domain [PF08976.13, score=23.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=23.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.2]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=89.7, Expect=1e-20]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=84.3, Expect=7e-19]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=82.4, Expect=1e-18]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=82.4, Expect=1e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=82.4, Expect=8e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=82.8, Expect=4e-19]} {RNA1509_2797, RNA1509_44715} {RNA1310_28282, RNA1509_2797, RNA1509_44715} {RNA1509_2797, RNA1509_44715, RNA815_7033}

Mlig455_050943 {REF} {Length: 1699} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=85.3]; EF hand [PF00036.34, score=77.0]; EF-hand domain [PF13405.8, score=69.1]; EF-hand domain pair [PF13833.8, score=49.3]; EF hand [PF13202.8, score=48.2]; EF-hand domain [PF14658.8, score=28.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.3]; EF-hand domain [PF08976.13, score=24.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.7]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=86.3, Expect=1e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=82.8, Expect=7e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=82.4, Expect=1e-18]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=84.0, Expect=4e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=82.4, Expect=7e-19]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=82.4, Expect=7e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=82.4, Expect=4e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.8, Expect=3e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=82.8, Expect=2e-19]} {RNA1509_4136, RNA1509_44715} {RNA1310_28282, RNA1509_4136} {RNA1509_4136, RNA815_7033}
2. MligTC455_43371 5012 104.41 Mlig455_014772, Mlig455_014831

Neo: -

Age: -

DPY30 2.55 - - 0.740 0.951 - 0.859

Mlig455_014772 {REF} {Length: 1035} {Pfam: Dpy-30 motif [PF05186.15, score=68.3]} {Human: ENSG00000162961, DPY30, dpy-30, histone methyltransferase complex regulatory subunit, [RH, Score=95.1, Expect=3e-26]} {Mouse: ENSMUSG00000024067, Dpy30, dpy-30, histone methyltransferase complex regulatory subunit, [RH, Score=95.5, Expect=2e-26]} {Dmel: FBgn0035491, Dpy-30L2, Dpy-30-like 2, [RH, Score=71.2, Expect=4e-17]} {Celegans: WBGene00001088, dpy-30, Dosage compensation protein dpy-30, [RH, Score=77.8, Expect=2e-19]} {Smed: dd_Smed_v6_9103_0_1, dd_Smed_v6_9103_0_1, [RH, Score=83.6, Expect=6e-22]} {RNA1509_4264} {RNA1310_13189.1} {RNA815_5530.1}

Mlig455_014831 {REF} {Length: 1343} {Pfam: Dpy-30 motif [PF05186.15, score=68.3]} {Human: ENSG00000162961, DPY30, dpy-30, histone methyltransferase complex regulatory subunit, [RH, Score=95.1, Expect=3e-26]} {Mouse: ENSMUSG00000024067, Dpy30, dpy-30, histone methyltransferase complex regulatory subunit, [RH, Score=95.5, Expect=2e-26]} {Dmel: FBgn0035491, Dpy-30L2, Dpy-30-like 2, [RH, Score=71.2, Expect=4e-17]} {Celegans: WBGene00001088, dpy-30, Dosage compensation protein dpy-30, [RH, Score=77.8, Expect=2e-19]} {Smed: dd_Smed_v6_9103_0_1, dd_Smed_v6_9103_0_1, [RH, Score=83.6, Expect=6e-22]} {RNA1509_4264} {RNA1310_13189.1} {RNA815_5530.1}
3. MligTC455_28697 266 5.54 Mlig455_042499

Neo: -

Age: logFC(26M/2M)=-0.392

MAOA 1.721 - - 0.767 - - 0.954 Mlig455_042499 {REF} {Length: 1991} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=168.3]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=35.2]; Thi4 family [PF01946.19, score=27.6]; FAD dependent oxidoreductase [PF01266.26, score=26.8]; Lycopene cyclase protein [PF05834.14, score=26.5]; FAD-NAD(P)-binding [PF13454.8, score=23.6]} {Human: ENSG00000189221, MAOA, monoamine oxidase A, [Score=157, Expect=8e-42]} {Mouse: ENSMUSG00000025037, Maoa, monoamine oxidase A, [Score=156, Expect=8e-42]; ENSMUSG00000040147, Maob, monoamine oxidase B, [Score=155, Expect=3e-41]} {Dmel: FBgn0033584, CG7737, [Score=53.1, Expect=4e-07]} {Celegans: WBGene00000138, amx-2, AMine oXidase family, [Score=70.9, Expect=9e-13]} {Smed: dd_Smed_v6_7098_0_2, dd_Smed_v6_7098_0_2, [Score=217, Expect=8e-65]} {RNA1509_33970, RNA1509_38315} {RNA1310_16025, RNA1509_38315} {RNA1509_38315, RNA815_18960}
4. MligTC455_35996 500 10.41 Mlig455_034313, Mlig455_040123

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.322

AK5 0.959 - - - - 0.959 -

Mlig455_034313 {REF} {Length: 3979} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110, RNA1509_39960, RNA1509_45641} {RNA1310_19485, RNA1509_39960, RNA1509_45641} {RNA1509_39960, RNA1509_45641, RNA815_14117}

Mlig455_040123 {REF} {Length: 2223} {TRANSSPLICED} {RNA1509_17110} {RNA1310_19485} {RNA815_14117}
5. MligTC455_36885 177 3.69 Mlig455_043100

Neo: -

Age: Up-Up-Down

CASP10 0.95 - - - - 0.950 - Mlig455_043100 {REF} {Length: 4546} {Pfam: Caspase domain [PF00656.24, score=96.4]} {Human: ENSG00000003400, CASP10, caspase 10, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=55.1, Expect=3e-07]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=58.2, Expect=1e-08]} {RNA1509_22461} {RNA1310_3207.1, RNA1509_22461} {RNA1509_22461, RNA815_1110}
6. MligTC455_43064 72 1.5 Mlig455_063587

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.598

GGT1 0.95 - - - - 0.950 - Mlig455_063587 {REF} {Length: 3028} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=253.1]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [Score=216, Expect=1e-65]; ENSG00000133475, GGT2, gamma-glutamyltransferase 2, [Score=211, Expect=9e-63]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [Score=215, Expect=2e-64]} {Dmel: FBgn0025837, CG17636, [Score=169, Expect=2e-47]} {Celegans: WBGene00011393, T03D8.6, [Score=182, Expect=5e-52]} {Smed: dd_Smed_v6_4591_0_3, dd_Smed_v6_4591_0_3, [Score=218, Expect=6e-67]} {RNA1509_10553} {RNA1310_21899} {RNA815_24200}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA