TomoSeq data search

Data search

Results for MligTC455_49443

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49443	80	1.67	Mlig455_024969	Neo: - Age: Up-Down-Up	FARS2	Mlig455_024969 {REF} {Length: 4603} {Pfam: tRNA synthetases class II core domain (F) [PF01409.22, score=159.2]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=78.5]} {Human: ENSG00000145982, FARS2, phenylalanyl-tRNA synthetase 2, mitochondrial, [RH, Score=442, Expect=4e-152]} {Mouse: ENSMUSG00000021420, Fars2, phenylalanine-tRNA synthetase 2 (mitochondrial), [RH, Score=439, Expect=3e-151]} {Dmel: FBgn0275436, PheRS-m, Phenylalanyl-tRNA synthetase, mitochondrial, [RH, Score=429, Expect=1e-147]} {Celegans: WBGene00013361, fars-2, Mitochondrial phenylalanyl-tRNA synthetase; Phenylalanyl Amino-acyl tRNA Synthetase, [RH, Score=383, Expect=2e-129]} {Smed: dd_Smed_v6_4882_0_4, dd_Smed_v6_4882_0_4, [RH, Score=424, Expect=1e-145]} {RNA1509_17915} {RNA1310_8998.1} {RNA815_8215}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49443

1.67

Mlig455_024969

Neo: -

Age: Up-Down-Up

FARS2

Mlig455_024969 {REF} {Length: 4603} {Pfam: tRNA synthetases class II core domain (F) [PF01409.22, score=159.2]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=78.5]} {Human: ENSG00000145982, FARS2, phenylalanyl-tRNA synthetase 2, mitochondrial, [RH, Score=442, Expect=4e-152]} {Mouse: ENSMUSG00000021420, Fars2, phenylalanine-tRNA synthetase 2 (mitochondrial), [RH, Score=439, Expect=3e-151]} {Dmel: FBgn0275436, PheRS-m, Phenylalanyl-tRNA synthetase, mitochondrial, [RH, Score=429, Expect=1e-147]} {Celegans: WBGene00013361, fars-2, Mitochondrial phenylalanyl-tRNA synthetase; Phenylalanyl Amino-acyl tRNA Synthetase, [RH, Score=383, Expect=2e-129]} {Smed: dd_Smed_v6_4882_0_4, dd_Smed_v6_4882_0_4, [RH, Score=424, Expect=1e-145]} {RNA1509_17915} {RNA1310_8998.1} {RNA815_8215}

Cumulative graph for MligTC455_49443

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.896	1.806	0.72336	1.00000
RegionR2	0.079	1.806	0.92717	1.00000
RegionR3	-1.069	1.806	0.20799	0.74836
RegionR4	-0.575	1.806	0.64706	0.95049
RegionR5	-0.329	1.806	0.59335	0.95129
RegionR6	-0.814	1.806	0.33861	0.92582
RegionR7	0.343	1.806	0.79391	1.00000
RegionR8	1.469	1.806	0.33450	0.96756

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.508	1.806	0.48722	1.00000
RegenerationR2	0.327	1.806	0.73694	0.96879
RegenerationR3	0.953	1.806	0.34489	0.76830
RegenerationR4	-0.48	1.806	0.62937	0.92299
RegenerationR5	0.087	1.806	0.91375	1.00000
RegenerationR6	0.45	1.806	0.68764	0.91755
RegenerationBL	-4.907	1.806	0.05254	0.26444
RegenerationTP	0.461	1.806	0.71450	1.00000

Genes with expression patterns similar to MligTC455_49443

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49443	80	1.67	Mlig455_024969	Neo: - Age: Up-Down-Up	FARS2	4	1.000	1.000	-	-	1.000	1.000	Mlig455_024969 {REF} {Length: 4603} {Pfam: tRNA synthetases class II core domain (F) [PF01409.22, score=159.2]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=78.5]} {Human: ENSG00000145982, FARS2, phenylalanyl-tRNA synthetase 2, mitochondrial, [RH, Score=442, Expect=4e-152]} {Mouse: ENSMUSG00000021420, Fars2, phenylalanine-tRNA synthetase 2 (mitochondrial), [RH, Score=439, Expect=3e-151]} {Dmel: FBgn0275436, PheRS-m, Phenylalanyl-tRNA synthetase, mitochondrial, [RH, Score=429, Expect=1e-147]} {Celegans: WBGene00013361, fars-2, Mitochondrial phenylalanyl-tRNA synthetase; Phenylalanyl Amino-acyl tRNA Synthetase, [RH, Score=383, Expect=2e-129]} {Smed: dd_Smed_v6_4882_0_4, dd_Smed_v6_4882_0_4, [RH, Score=424, Expect=1e-145]} {RNA1509_17915} {RNA1310_8998.1} {RNA815_8215}
2.	MligTC455_03494	159	3.31	Mlig455_049159, Mlig455_049213	Neo: - Age: Down-Up-Down	LBX1	0.952	-	-	-	-	-	0.952	Mlig455_049159 {REF} {Length: 1395} {Pfam: Homeodomain [PF00046.31, score=78.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=24.0]} {Human: ENSG00000138136, LBX1, ladybird homeobox 1, [RH, Score=111, Expect=3e-29]; ENSG00000179528, LBX2, ladybird homeobox 2, [RH, Score=108, Expect=4e-29]} {Mouse: ENSMUSG00000025216, Lbx1, ladybird homeobox 1, [RH, Score=111, Expect=2e-29]} {Dmel: FBgn0008651, lbl, ladybird late, [RH, Score=108, Expect=6e-28]} {Celegans: WBGene00000450, ceh-28, C. Elegans Homeobox; NK-2 family homeodomain protein CEH-28, [Score=68.2, Expect=5e-14]} {Smed: dd_Smed_v6_31435_0_1, dd_Smed_v6_31435_0_1, [RH, Score=96.3, Expect=4e-25]} {RNA1310_22869} Mlig455_049213 {REF} {Length: 1799} {Pfam: Homeodomain [PF00046.31, score=78.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=33.8]; Anti-sigma-K factor rskA [PF10099.11, score=22.5]} {Human: ENSG00000138136, LBX1, ladybird homeobox 1, [RH, Score=114, Expect=1e-28]} {Mouse: ENSMUSG00000025216, Lbx1, ladybird homeobox 1, [RH, Score=114, Expect=1e-28]} {Dmel: FBgn0011278, lbe, ladybird early, [RH, Score=108, Expect=9e-26]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_31435_0_1, dd_Smed_v6_31435_0_1, [RH, Score=98.2, Expect=3e-24]} {RNA1310_22869}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49443

1.67

Mlig455_024969

Neo: -

Age: Up-Down-Up

FARS2

1.000

MligTC455_03494

159

3.31

Mlig455_049159, Mlig455_049213

Neo: -

Age: Down-Up-Down

LBX1

0.952

Mlig455_049159 {REF} {Length: 1395} {Pfam: Homeodomain [PF00046.31, score=78.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=24.0]} {Human: ENSG00000138136, LBX1, ladybird homeobox 1, [RH, Score=111, Expect=3e-29]; ENSG00000179528, LBX2, ladybird homeobox 2, [RH, Score=108, Expect=4e-29]} {Mouse: ENSMUSG00000025216, Lbx1, ladybird homeobox 1, [RH, Score=111, Expect=2e-29]} {Dmel: FBgn0008651, lbl, ladybird late, [RH, Score=108, Expect=6e-28]} {Celegans: WBGene00000450, ceh-28, C. Elegans Homeobox; NK-2 family homeodomain protein CEH-28, [Score=68.2, Expect=5e-14]} {Smed: dd_Smed_v6_31435_0_1, dd_Smed_v6_31435_0_1, [RH, Score=96.3, Expect=4e-25]} {RNA1310_22869}

Mlig455_049213 {REF} {Length: 1799} {Pfam: Homeodomain [PF00046.31, score=78.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=33.8]; Anti-sigma-K factor rskA [PF10099.11, score=22.5]} {Human: ENSG00000138136, LBX1, ladybird homeobox 1, [RH, Score=114, Expect=1e-28]} {Mouse: ENSMUSG00000025216, Lbx1, ladybird homeobox 1, [RH, Score=114, Expect=1e-28]} {Dmel: FBgn0011278, lbe, ladybird early, [RH, Score=108, Expect=9e-26]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_31435_0_1, dd_Smed_v6_31435_0_1, [RH, Score=98.2, Expect=3e-24]} {RNA1310_22869}