TomoSeq data search

Data search

Results for MligTC455_49475

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49475

78

1.63

Mlig455_057152

Neo: -

Age: Up-Down-Up

SCARB1

Mlig455_057152 {REF} {Length: 2880} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=352.5]; Porin PorA [PF11271.10, score=19.5]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [Score=210, Expect=6e-61]; ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=208, Expect=2e-60]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=210, Expect=3e-61]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=188, Expect=9e-53]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=146, Expect=1e-37]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=262, Expect=1e-80]} {RNA1509_12751} {RNA1310_8968} {RNA815_16016}

Cumulative graph for MligTC455_49475

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.118	1.714	0.99621	1.00000
RegionR2	2.193	1.714	0.11377	0.41706
RegionR3	1.338	1.714	0.22633	0.76797
RegionR4	0.767	1.714	0.54636	0.86793
RegionR5	0.214	1.714	0.72527	1.00000
RegionR6	-0.502	1.714	0.94132	1.00000
RegionR7	0.764	1.714	0.59820	1.00000
RegionR8	-3.656	1.714	0.39228	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.338	1.714	0.88726	1.00000
RegenerationR2	1.131	1.714	0.14479	0.57615
RegenerationR3	1.62	1.714	0.10864	0.51997
RegenerationR4	1.539	1.714	0.15633	0.58749
RegenerationR5	2.107	1.714	0.02602	0.27470
RegenerationR6	2.501	1.714	0.05529	0.29496
RegenerationBL	4.734	1.714	0.00110	0.02433
RegenerationTP	4.455	1.714	0.01690	0.22305

Genes with expression patterns similar to MligTC455_49475

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49475	78	1.63	Mlig455_057152	Neo: - Age: Up-Down-Up	SCARB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057152 {REF} {Length: 2880} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=352.5]; Porin PorA [PF11271.10, score=19.5]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [Score=210, Expect=6e-61]; ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=208, Expect=2e-60]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=210, Expect=3e-61]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=188, Expect=9e-53]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=146, Expect=1e-37]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=262, Expect=1e-80]} {RNA1509_12751} {RNA1310_8968} {RNA815_16016}
2.	MligTC455_20264	3839	79.98	Mlig455_004009, Mlig455_004093	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.975	ANK3	0.967	-	-	-	-	-	0.967	Mlig455_004009 {REF} {Length: 4291} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=118.9]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeats (many copies) [PF13637.8, score=90.0]; Ankyrin repeats (many copies) [PF13857.8, score=84.8]; Ankyrin repeat [PF13606.8, score=73.4]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=127, Expect=7e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=124, Expect=5e-28]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=121, Expect=3e-27]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=121, Expect=3e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=119, Expect=9e-27]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=119, Expect=7e-27]} {RNA1509_9109} {RNA1310_24854.1} {RNA815_11486} Mlig455_004093 {REF} {Length: 4136} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=119.2]; Ankyrin repeat [PF00023.32, score=99.2]; Ankyrin repeats (many copies) [PF13637.8, score=90.2]; Ankyrin repeats (many copies) [PF13857.8, score=85.3]; Ankyrin repeat [PF13606.8, score=73.9]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=127, Expect=7e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=123, Expect=7e-28]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=121, Expect=2e-27]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=120, Expect=5e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=118, Expect=2e-26]} {Smed: dd_Smed_v6_2072_0_26, dd_Smed_v6_2072_0_26, [Score=119, Expect=6e-27]} {RNA1509_9109} {RNA1310_24854.1} {RNA815_11486}
3.	MligTC455_01026	25	0.51	Mlig455_024615	Neo: - Age: -	SBSN	0.958	-	-	-	0.958	-	-	Mlig455_024615 {REF} {Length: 1590} {Pfam: Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=40.8]; Protein of unknown function (DUF3106) [PF11304.10, score=27.7]; Cell division protein ZapB [PF06005.14, score=24.5]; Golgi transport complex subunit 5 [PF10392.11, score=23.8]; Septation ring formation regulator, EzrA [PF06160.14, score=17.4]} {Human: ENSG00000189001, SBSN, suprabasin, [RH, Score=69.3, Expect=1e-12]}
4.	MligTC455_22266	2059	42.91	Mlig455_005540	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.298	MXI1	0.952	-	-	-	-	-	0.952	Mlig455_005540 {REF} {Length: 3074} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=44.1]} {Human: ENSG00000119950, MXI1, MAX interactor 1, dimerization protein, [RH, Score=74.7, Expect=2e-14]} {Mouse: ENSMUSG00000025025, Mxi1, MAX interactor 1, dimerization protein, [RH, Score=74.7, Expect=1e-14]} {Dmel: FBgn0023215, Mnt, [RH, Score=65.9, Expect=2e-11]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [Score=50.8, Expect=5e-07]} {RNA1509_10091, RNA1509_22690, RNA1509_29689, RNA1509_9215} {RNA1310_25464, RNA1509_22690, RNA1509_29689, RNA1509_9215} {RNA1509_22690, RNA1509_29689, RNA1509_9215, RNA815_10848.1}

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