Data search


search
Exact
Search

Results for MligTC455_49499

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49499 174 3.63 Mlig455_043864

Neo: -

Age: -

ARMT1 Mlig455_043864 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: Damage-control phosphatase ARMT1-like domain [PF01937.21, score=254.8]} {Human: ENSG00000146476, ARMT1, acidic residue methyltransferase 1, [Score=201, Expect=1e-59]} {Mouse: ENSMUSG00000061759, Armt1, acidic residue methyltransferase 1, [Score=204, Expect=4e-61]} {Dmel: FBgn0034688, CG11474, [Score=190, Expect=4e-56]} {Celegans: WBGene00009290, F31D4.2, [Score=177, Expect=3e-51]} {Smed: dd_Smed_v6_11241_0_1, dd_Smed_v6_11241_0_1, [Score=162, Expect=1e-45]} {RNA1509_35866} {RNA1310_20337.1} {RNA815_24582}

Cumulative graph for MligTC455_49499

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.728 2.488 0.60693 1.00000
RegionR2 0.586 2.488 0.42317 0.81377
RegionR3 -0.519 2.488 0.30124 0.84313
RegionR4 -0.829 2.488 0.25313 0.55337
RegionR5 -0.45 2.488 0.31193 0.65079
RegionR6 -0.631 2.488 0.24586 0.83150
RegionR7 0.854 2.488 0.21023 0.82425
RegionR8 0.262 2.488 0.76560 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.795 2.488 0.39554 1.00000
RegenerationR2 -0.625 2.488 0.33420 0.77038
RegenerationR3 -0.084 2.488 0.90870 1.00000
RegenerationR4 -0.663 2.488 0.37113 0.79472
RegenerationR5 0.17 2.488 0.75407 0.97283
RegenerationR6 -0.023 2.488 0.98288 1.00000
RegenerationBL -2.238 2.488 0.14239 0.44994
RegenerationTP -1.266 2.488 0.21451 0.65743


Genes with expression patterns similar to MligTC455_49499

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49499 174 3.63 Mlig455_043864

Neo: -

Age: -

ARMT1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_043864 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: Damage-control phosphatase ARMT1-like domain [PF01937.21, score=254.8]} {Human: ENSG00000146476, ARMT1, acidic residue methyltransferase 1, [Score=201, Expect=1e-59]} {Mouse: ENSMUSG00000061759, Armt1, acidic residue methyltransferase 1, [Score=204, Expect=4e-61]} {Dmel: FBgn0034688, CG11474, [Score=190, Expect=4e-56]} {Celegans: WBGene00009290, F31D4.2, [Score=177, Expect=3e-51]} {Smed: dd_Smed_v6_11241_0_1, dd_Smed_v6_11241_0_1, [Score=162, Expect=1e-45]} {RNA1509_35866} {RNA1310_20337.1} {RNA815_24582}
2. MligTC455_23841 395 8.22 Mlig455_022917

Neo: -

Age: Down-Up-Down

1.769 0.960 - - - - 0.809 Mlig455_022917 {REF} {Length: 3298} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_38511} {RNA1310_26466.1, RNA1509_38511} {RNA1509_38511, RNA815_11381}
3. MligTC455_23840 421 8.78 Mlig455_022906

Neo: -

Age: -

1.737 0.960 - - - - 0.777 Mlig455_022906 {REF} {Length: 4155} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_53765} {RNA1310_21290.1, RNA1509_28157, RNA1509_53765} {RNA1509_28157, RNA1509_53765, RNA815_11133}
4. MligTC455_40678 282 5.88 Mlig455_001690

Neo: Int S/G2/M

Age: -

CRLS1 0.985 - - - - - 0.985 Mlig455_001690 {REF} {Length: 1882} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=47.3]} {Human: ENSG00000088766, CRLS1, cardiolipin synthase 1, [RH, Score=117, Expect=6e-32]} {Mouse: ENSMUSG00000027357, Crls1, cardiolipin synthase 1, [RH, Score=113, Expect=1e-30]} {Dmel: FBgn0039360, CLS, Cardiolipin synthase, [RH, Score=128, Expect=4e-35]} {Celegans: WBGene00017763, crls-1, Probable cardiolipin synthase (CMP-forming), [RH, Score=110, Expect=3e-29]} {Smed: dd_Smed_v6_8891_0_1, dd_Smed_v6_8891_0_1, [RH, Score=116, Expect=1e-31]} {RNA1509_43304, RNA1509_48576} {RNA1310_26504.1, RNA1509_48576} {RNA1509_48576, RNA815_21980}
5. MligTC455_37976 287 5.97 Mlig455_057731

Neo: -

Age: -

Region-enriched R2: 2.845/0.00394

0.973 - - 0.973 - - - Mlig455_057731 {REF} {Length: 459} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937}
6. MligTC455_10473 6 0.12 Mlig455_047667

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_047667 {REF} {Length: 194} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_5184.1}
7. MligTC455_28705 951 19.82 Mlig455_028404, Mlig455_028417

Neo: -

Age: -

0.953 - - - - - 0.953

Mlig455_028404 {REF} {Length: 414} {NoTransDecoderORF} {RNA1509_27429} {RNA1310_30171} {RNA815_25637}

Mlig455_028417 {REF} {Length: 943} {NoTransDecoderORF} {RNA1509_27429, RNA1509_35074, RNA1509_36457, RNA1509_55992} {RNA1310_45161.1, RNA1509_27429, RNA1509_35074, RNA1509_36457, RNA1509_55992} {RNA1509_27429, RNA1509_35074, RNA1509_36457, RNA1509_55992, RNA815_13680.1}
8. MligTC455_40251 849 17.69 Mlig455_013963, Mlig455_039329

Neo: -

Age: -

REPS1 0.952 - - - - - 0.952

Mlig455_013963 {REF} {Length: 3321} {TRANSSPLICED} {Pfam: Cytoskeletal-regulatory complex EF hand [PF12763.9, score=33.2]} {Human: ENSG00000135597, REPS1, RALBP1 associated Eps domain containing 1, [RH, Score=105, Expect=9e-24]; ENSG00000169891, REPS2, RALBP1 associated Eps domain containing 2, [RH, Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000019854, Reps1, RalBP1 associated Eps domain containing protein, [RH, Score=105, Expect=8e-24]; ENSMUSG00000040855, Reps2, RALBP1 associated Eps domain containing protein 2, [RH, Score=105, Expect=4e-24]} {Dmel: FBgn0032341, Reps, RALBP1 associated Eps domain containing, [RH, Score=100, Expect=4e-22]} {Celegans: WBGene00012696, reps-1, REPS (RalBP1-associated Eps domain-containing protein) homolog, [RH, Score=72.8, Expect=9e-14]} {Smed: dd_Smed_v6_7320_0_1, dd_Smed_v6_7320_0_1, [RH, Score=97.4, Expect=4e-22]} {RNA1509_59336} {RNA1310_9307} {RNA815_2143.1}

Mlig455_039329 {REF} {Length: 3579} {TRANSSPLICED} {Pfam: Cytoskeletal-regulatory complex EF hand [PF12763.9, score=35.6]} {Human: ENSG00000135597, REPS1, RALBP1 associated Eps domain containing 1, [RH, Score=109, Expect=1e-24]; ENSG00000169891, REPS2, RALBP1 associated Eps domain containing 2, [RH, Score=108, Expect=2e-24]} {Mouse: ENSMUSG00000040855, Reps2, RALBP1 associated Eps domain containing protein 2, [RH, Score=109, Expect=6e-25]; ENSMUSG00000019854, Reps1, RalBP1 associated Eps domain containing protein, [RH, Score=108, Expect=9e-27]} {Dmel: FBgn0032341, Reps, RALBP1 associated Eps domain containing, [RH, Score=103, Expect=6e-23]} {Celegans: WBGene00012696, reps-1, REPS (RalBP1-associated Eps domain-containing protein) homolog, [RH, Score=75.1, Expect=2e-14]} {Smed: dd_Smed_v6_7320_0_1, dd_Smed_v6_7320_0_1, [RH, Score=99.4, Expect=8e-23]} {RNA1509_44546} {RNA1310_9307} {RNA815_2143.1}
9. MligTC455_14295 43 0.9 Mlig455_045473

Neo: -

Age: -

Region-enriched R7: 3.813/0.03308

0.95 - - - - 0.950 - Mlig455_045473 {REF} {Length: 1767} {RNA1509_45430} {RNA1310_34641} {RNA815_48081}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA