Data search
Results for MligTC455_49505
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49505 | 10 | 0.21 | Mlig455_063796 | Neo: - Age: - |
Mlig455_063796 {REF} {Length: 2484} {TRANSSPLICED} {RNA1509_23457} {RNA1310_13685} {RNA815_5694} |
Cumulative graph for MligTC455_49505
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_49505
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49505 | 10 | 0.21 | Mlig455_063796 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_063796 {REF} {Length: 2484} {TRANSSPLICED} {RNA1509_23457} {RNA1310_13685} {RNA815_5694} | |
| 2. | MligTC455_14501 | 55 | 1.15 | Mlig455_047255 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.570/0.00646 |
0.964 | - | - | - | - | 0.964 | - | Mlig455_047255 {REF} {Length: 1057} {TRANSSPLICED} {RNA1509_21707, RNA1509_56030} {RNA1310_23619, RNA1509_21707, RNA1509_56030} {RNA1509_21707, RNA1509_56030, RNA815_11671} | |
| 3. | MligTC455_22612 | 109 | 2.26 | Mlig455_026956 | Neo: - Age: - |
FYN | 0.952 | - | - | - | - | 0.952 | - | Mlig455_026956 {REF} {Length: 4578} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=252.5]; Protein kinase domain [PF00069.27, score=163.9]; SH3 domain [PF00018.30, score=35.6]; Variant SH3 domain [PF07653.19, score=34.4]; SH2 domain [PF00017.26, score=33.2]; Variant SH3 domain [PF14604.8, score=30.8]; Bacterial SH3 domain [PF08239.13, score=24.4]; ABC1 atypical kinase-like domain [PF03109.18, score=18.9]; Kinase-like [PF14531.8, score=18.8]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=285, Expect=4e-89]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=275, Expect=6e-86]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=272, Expect=1e-84]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=284, Expect=4e-89]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=275, Expect=1e-85]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=270, Expect=1e-83]} {Dmel: FBgn0262733, Src64B, Src oncogene at 64B, [Score=274, Expect=3e-85]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=284, Expect=6e-90]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=310, Expect=9e-100]} {RNA1509_37079} {RNA1310_14637, RNA1509_37079} {RNA1509_37079, RNA815_4860} |
| 4. | MligTC455_20428 | 37 | 0.78 | Mlig455_050428 | Neo: - Age: Up-Down-Down Region-enriched R2: 7.829/0.00010 |
LRRN3 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_050428 {REF} {Length: 10329} {Pfam: Leucine rich repeat [PF13855.8, score=96.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=63.4]; Immunoglobulin domain [PF13927.8, score=44.7]; Immunoglobulin I-set domain [PF07679.18, score=41.3]; Immunoglobulin domain [PF00047.27, score=31.4]; Leucine-rich repeat [PF14580.8, score=24.8]; Immunoglobulin V-set domain [PF07686.19, score=23.1]; Immunoglobulin domain [PF13895.8, score=22.9]; Leucine Rich Repeat [PF00560.35, score=20.8]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [RH, Score=114, Expect=2e-25]; ENSG00000174482, LINGO2, leucine rich repeat and Ig domain containing 2, [RH, Score=112, Expect=3e-25]; ENSG00000175928, LRRN1, leucine rich repeat neuronal 1, [RH, Score=111, Expect=2e-24]} {Mouse: ENSMUSG00000036295, Lrrn3, leucine rich repeat protein 3, neuronal, [RH, Score=113, Expect=2e-25]; ENSMUSG00000045083, Lingo2, leucine rich repeat and Ig domain containing 2, [RH, Score=110, Expect=1e-24]; ENSMUSG00000034648, Lrrn1, leucine rich repeat protein 1, neuronal, [RH, Score=108, Expect=5e-24]} {Dmel: FBgn0032479, CG16974, [Score=89.0, Expect=1e-17]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=73.6, Expect=4e-13]} {RNA1509_34876} {RNA1310_313, RNA1509_34876} {RNA1509_34876, RNA815_2616} |
Berezikov Lab - 2020-2021 © ERIBA