Data search


search
Exact
Search

Results for MligTC455_49507

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49507 441 9.19 Mlig455_007787

Neo: -

Age: logFC(26M/2M)=-0.328

ANK1 Mlig455_007787 {REF} {Length: 3858} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.9]; Ankyrin repeats (many copies) [PF13637.8, score=134.5]; Ankyrin repeat [PF13606.8, score=124.9]; Ankyrin repeats (many copies) [PF13857.8, score=124.8]; Ankyrin repeat [PF00023.32, score=116.0]; SOCS box [PF07525.18, score=40.3]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=142, Expect=1e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=141, Expect=3e-34]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=145, Expect=1e-35]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=120, Expect=7e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=114, Expect=3e-26]} {Smed: dd_Smed_v6_2072_0_25, dd_Smed_v6_2072_0_25, [Score=114, Expect=3e-26]} {RNA1509_21864} {RNA1310_480.1} {RNA815_8853}

Cumulative graph for MligTC455_49507

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.084 3.543 0.11371 0.69879
RegionR2 0.916 3.543 0.26231 0.64386
RegionR3 0.64 3.543 0.43895 0.95600
RegionR4 0.719 3.543 0.40106 0.72762
RegionR5 -0.237 3.543 0.91474 1.00000
RegionR6 0.341 3.543 0.67737 1.00000
RegionR7 1.882 3.543 0.00731 0.14128
RegionR8 1.823 3.543 0.03915 0.38961

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.634 3.543 0.99994 1.00000
RegenerationR2 0.312 3.543 0.35272 0.78325
RegenerationR3 0.119 3.543 0.77738 0.97409
RegenerationR4 0.147 3.543 0.72468 0.96313
RegenerationR5 0.587 3.543 0.16046 0.58373
RegenerationR6 0.588 3.543 0.18602 0.52223
RegenerationBL 0.457 3.543 0.31157 0.67716
RegenerationTP -0.154 3.543 0.75874 1.00000


Genes with expression patterns similar to MligTC455_49507

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49507 441 9.19 Mlig455_007787

Neo: -

Age: logFC(26M/2M)=-0.328

ANK1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_007787 {REF} {Length: 3858} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.9]; Ankyrin repeats (many copies) [PF13637.8, score=134.5]; Ankyrin repeat [PF13606.8, score=124.9]; Ankyrin repeats (many copies) [PF13857.8, score=124.8]; Ankyrin repeat [PF00023.32, score=116.0]; SOCS box [PF07525.18, score=40.3]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=142, Expect=1e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=141, Expect=3e-34]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=145, Expect=1e-35]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=120, Expect=7e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=114, Expect=3e-26]} {Smed: dd_Smed_v6_2072_0_25, dd_Smed_v6_2072_0_25, [Score=114, Expect=3e-26]} {RNA1509_21864} {RNA1310_480.1} {RNA815_8853}
2. MligTC455_43146 115 2.4 Mlig455_060367

Neo: -

Age: -

TTLL1 0.956 - - - - 0.956 - Mlig455_060367 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=367.4]; YheC/D like ATP-grasp [PF14398.8, score=28.5]; Sugar-transfer associated ATP-grasp [PF14397.8, score=25.3]} {Human: ENSG00000100271, TTLL1, tubulin tyrosine ligase like 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000022442, Ttll1, tubulin tyrosine ligase-like 1, [RH, Score=615, Expect=0.0]} {Dmel: FBgn0052238, CG32238, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=282, Expect=5e-91]} {Smed: dd_Smed_v6_11158_0_1, dd_Smed_v6_11158_0_1, [RH, Score=636, Expect=0.0]} {RNA1509_56177, RNA1509_9729} {RNA1310_12326.1, RNA1509_56177, RNA1509_9729} {RNA1509_56177, RNA1509_9729, RNA815_11282}
3. MligTC455_22728 280 5.84 Mlig455_009717

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_009717 {REF} {Length: 650} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38299} {RNA1310_627.2} {RNA815_26978}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA