TomoSeq data search

Data search

Results for MligTC455_49522

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49522

169

3.53

Mlig455_008905, Mlig455_009005, Mlig455_016599

Neo: -

Age: -

Mlig455_008905 {REF} {Length: 2669} {RNA1509_43443} {RNA1310_7371.2} {RNA815_16230}

Mlig455_009005 {REF} {Length: 3176} {RNA1509_43443} {RNA1310_7371.1} {RNA815_16230}

Mlig455_016599 {REF} {Length: 2638} {RNA1509_43443} {RNA1310_7371.2, RNA1509_43443} {RNA1509_43443, RNA815_16230}

Cumulative graph for MligTC455_49522

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.645	2.598	0.37711	1.00000
RegionR2	1.188	2.598	0.42079	0.81219
RegionR3	0.548	2.598	0.64048	1.00000
RegionR4	0.729	2.598	0.61604	0.92660
RegionR5	1.435	2.598	0.22841	0.53424
RegionR6	1.789	2.598	0.14144	0.67458
RegionR7	-0.546	2.598	0.96469	1.00000
RegionR8	-0.499	2.598	0.95896	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.19	2.598	1.00000	1.00000
RegenerationR2	-0.091	2.598	0.92886	1.00000
RegenerationR3	1.933	2.598	0.12338	0.54352
RegenerationR4	1.05	2.598	0.43631	0.83452
RegenerationR5	1.338	2.598	0.23445	0.66831
RegenerationR6	-0.449	2.598	0.69881	0.92376
RegenerationBL	0.687	2.598	0.62857	0.97001
RegenerationTP	2.123	2.598	0.14915	0.57316

Genes with expression patterns similar to MligTC455_49522

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49522	169	3.53	Mlig455_008905, Mlig455_009005, Mlig455_016599	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008905 {REF} {Length: 2669} {RNA1509_43443} {RNA1310_7371.2} {RNA815_16230} Mlig455_009005 {REF} {Length: 3176} {RNA1509_43443} {RNA1310_7371.1} {RNA815_16230} Mlig455_016599 {REF} {Length: 2638} {RNA1509_43443} {RNA1310_7371.2, RNA1509_43443} {RNA1509_43443, RNA815_16230}
2.	MligTC455_51435	176	3.67	Mlig455_024682	Neo: Int S/G2/M Age: - Region-enriched R5: 1.635/0.03730	RNF165	0.99	-	-	0.990	-	-	-	Mlig455_024682 {REF} {Length: 2972} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=37.7]; zinc-RING finger domain [PF14634.8, score=23.4]; RING-H2 zinc finger domain [PF12678.9, score=22.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.4]} {Human: ENSG00000141622, RNF165, ring finger protein 165, [Score=52.8, Expect=1e-07]; ENSG00000157450, RNF111, ring finger protein 111, [Score=52.0, Expect=2e-06]; ENSG00000099999, RNF215, ring finger protein 215, [Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000025427, Rnf165, ring finger protein 165, [Score=52.8, Expect=7e-08]; ENSMUSG00000032217, Rnf111, ring finger 111, [Score=51.6, Expect=2e-06]; ENSMUSG00000003581, Rnf215, ring finger protein 215, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0037944, CG6923, [Score=50.1, Expect=4e-06]} {Celegans: WBGene00015194, B0432.13, [RH, Score=72.4, Expect=2e-13]} {Smed: dd_Smed_v6_45208_0_1, dd_Smed_v6_45208_0_1, [RH, Score=56.2, Expect=4e-09]} {RNA1509_38484, RNA1509_41878} {RNA1310_16843, RNA1509_38484, RNA1509_41878} {RNA1509_38484, RNA1509_41878, RNA815_15976}
3.	MligTC455_17828	147	3.07	Mlig455_047212	Neo: - Age: Up-Down-Down Region-enriched R2: 2.512/0.02591	KEAP1	0.963	-	-	-	-	-	0.963	Mlig455_047212 {REF} {Length: 5896} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=245.0]; Kelch motif [PF13964.8, score=142.1]; BTB/POZ domain [PF00651.33, score=102.0]; BTB And C-terminal Kelch [PF07707.17, score=95.6]; Kelch motif [PF07646.17, score=90.7]; Galactose oxidase, central domain [PF13415.8, score=84.8]; Galactose oxidase, central domain [PF13418.8, score=83.7]; Kelch motif [PF13854.8, score=44.1]} {Human: ENSG00000079999, KEAP1, kelch like ECH associated protein 1, [RH, Score=466, Expect=3e-157]} {Mouse: ENSMUSG00000003308, Keap1, kelch-like ECH-associated protein 1, [RH, Score=464, Expect=1e-156]} {Dmel: FBgn0038475, Keap1, [RH, Score=500, Expect=1e-168]} {Celegans: WBGene00020030, R12E2.1, [Score=310, Expect=1e-97]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [RH, Score=591, Expect=0.0]} {RNA1509_23206, RNA1509_56388} {RNA1310_11416, RNA1509_23206, RNA1509_56388} {RNA1509_23206, RNA1509_56388, RNA815_19307}
4.	MligTC455_24321	285	5.94	Mlig455_018579	Neo: Int S/G2/M Age: -	ANKMY2	0.956	-	-	0.956	-	-	-	Mlig455_018579 {REF} {Length: 2256} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.2]; MYND finger [PF01753.20, score=32.0]; Ankyrin repeat [PF13606.8, score=31.2]; Ankyrin repeat [PF00023.32, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [RH, Score=254, Expect=2e-78]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [RH, Score=251, Expect=4e-77]} {Dmel: FBgn0036096, CG8003, [RH, Score=191, Expect=4e-55]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [RH, Score=137, Expect=2e-35]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [RH, Score=232, Expect=8e-71]} {RNA1509_31086} {RNA1310_13185} {RNA815_18603}
5.	MligTC455_53130	144	3.01	Mlig455_060165	Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.182	REG1A	0.95	-	-	-	-	0.950	-	Mlig455_060165 {REF} {Length: 1715} {Pfam: Lectin C-type domain [PF00059.23, score=65.7]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=27.6]} {Human: ENSG00000115386, REG1A, regenerating family member 1 alpha, [Score=56.2, Expect=5e-09]} {Mouse: ENSMUSG00000023140, Reg2, regenerating islet-derived 2, [Score=49.7, Expect=7e-07]} {RNA1509_7169} {RNA1310_18329, RNA1509_7169} {RNA1509_7169, RNA815_9235}

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