TomoSeq data search

Data search

Results for MligTC455_49539

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49539

278

5.80

Mlig455_026370

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.744/0.03897

KLHL12

Mlig455_026370 {REF} {Length: 3841} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=210.4]; Kelch motif [PF13964.8, score=134.7]; BTB/POZ domain [PF00651.33, score=108.4]; BTB And C-terminal Kelch [PF07707.17, score=101.4]; Galactose oxidase, central domain [PF13418.8, score=74.8]; Kelch motif [PF07646.17, score=71.6]; Galactose oxidase, central domain [PF13415.8, score=70.3]; Kelch motif [PF13854.8, score=36.4]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [Score=374, Expect=5e-122]} {Celegans: WBGene00020030, R12E2.1, [Score=352, Expect=8e-114]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_17800} {RNA1310_5820} {RNA815_4439}

Cumulative graph for MligTC455_49539

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.413	2.99	0.08782	0.63979
RegionR2	0.279	2.99	0.73091	1.00000
RegionR3	0.018	2.99	0.84505	1.00000
RegionR4	1.315	2.99	0.12127	0.34907
RegionR5	1.744	2.99	0.00583	0.03897
RegionR6	0.672	2.99	0.46047	1.00000
RegionR7	1.551	2.99	0.06656	0.49586
RegionR8	0.834	2.99	0.45581	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.221	2.99	1.00000	1.00000
RegenerationR2	0.694	2.99	0.16042	0.59763
RegenerationR3	0.274	2.99	0.65150	0.92964
RegenerationR4	-0.433	2.99	0.43824	0.83579
RegenerationR5	-0.852	2.99	0.08480	0.44908
RegenerationR6	-0.295	2.99	0.62881	0.88589
RegenerationBL	-0.235	2.99	0.72386	1.00000
RegenerationTP	0.136	2.99	0.83969	1.00000

Genes with expression patterns similar to MligTC455_49539

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49539	278	5.8	Mlig455_026370	Neo: - Age: Down-Up-Down Region-enriched R5: 1.744/0.03897	KLHL12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026370 {REF} {Length: 3841} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=210.4]; Kelch motif [PF13964.8, score=134.7]; BTB/POZ domain [PF00651.33, score=108.4]; BTB And C-terminal Kelch [PF07707.17, score=101.4]; Galactose oxidase, central domain [PF13418.8, score=74.8]; Kelch motif [PF07646.17, score=71.6]; Galactose oxidase, central domain [PF13415.8, score=70.3]; Kelch motif [PF13854.8, score=36.4]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [Score=374, Expect=5e-122]} {Celegans: WBGene00020030, R12E2.1, [Score=352, Expect=8e-114]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_17800} {RNA1310_5820} {RNA815_4439}
2.	MligTC455_19879	256	5.34	Mlig455_019841	Neo: - Age: -	RAB6A	0.964	-	-	0.964	-	-	-	Mlig455_019841 {REF} {Length: 2534} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=200.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=125.1]; ADP-ribosylation factor family [PF00025.23, score=57.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=26.8]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; RsgA GTPase [PF03193.18, score=22.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.4]; Ferrous iron transport protein B [PF02421.20, score=18.4]} {Human: ENSG00000175582, RAB6A, RAB6A, member RAS oncogene family, [RH, Score=342, Expect=5e-121]; ENSG00000154917, RAB6B, RAB6B, member RAS oncogene family, [RH, Score=330, Expect=2e-116]} {Mouse: ENSMUSG00000030704, Rab6a, RAB6A, member RAS oncogene family, [RH, Score=340, Expect=4e-120]; ENSMUSG00000032549, Rab6b, RAB6B, member RAS oncogene family, [RH, Score=330, Expect=1e-116]} {Dmel: FBgn0015797, Rab6, [RH, Score=338, Expect=8e-120]} {Celegans: WBGene00004270, rab-6.2, Ras-related protein Rab-6.2, [RH, Score=332, Expect=1e-117]} {Smed: dd_Smed_v6_4465_0_1, dd_Smed_v6_4465_0_1, [Score=340, Expect=1e-120]} {RNA1509_15255, RNA1509_31786, RNA1509_45075, RNA1509_48019} {RNA1310_32138, RNA1509_15255, RNA1509_45075, RNA1509_48019} {RNA1509_15255, RNA1509_45075, RNA1509_48019, RNA815_15502.1}
3.	MligTC455_12247	72	1.5	Mlig455_038662	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_038662 {REF} {Length: 1178} {TRANSSPLICED} {RNA1509_7400} {RNA1310_41307} {RNA815_19043.1}
4.	MligTC455_50533	66	1.38	Mlig455_064328	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_064328 {REF} {Length: 838} {RNA1310_88153} {RNA815_57541}
5.	MligTC455_48151	580	12.08	Mlig455_041803	Neo: - Age: -	RPIA	0.956	-	-	-	-	-	0.956	Mlig455_041803 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: Ribose 5-phosphate isomerase A (phosphoriboisomerase A) [PF06026.16, score=197.8]} {Human: ENSG00000153574, RPIA, ribose 5-phosphate isomerase A, [RH, Score=252, Expect=2e-83]} {Mouse: ENSMUSG00000053604, Rpia, ribose 5-phosphate isomerase A, [RH, Score=253, Expect=4e-84]} {Dmel: FBgn0050410, Rpi, Ribose-5-phosphate isomerase, [RH, Score=202, Expect=4e-65]} {Celegans: WBGene00015101, rpia-1, Probable-ribose 5-phosphate isomerase, [RH, Score=175, Expect=3e-54]} {Smed: dd_Smed_v6_12956_0_2, dd_Smed_v6_12956_0_2, [Score=246, Expect=1e-82]} {RNA1509_26023} {RNA1310_18063.1} {RNA815_6995.1}
6.	MligTC455_23718	156	3.25	Mlig455_069946	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.465		0.951	-	-	-	-	0.951	-	Mlig455_069946 {REF} {Length: 894} {RNA1509_35160} {RNA1310_48019} {RNA815_16808}

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