TomoSeq data search

Data search

Results for MligTC455_49624

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49624

487

10.14

Mlig455_005266

Neo: -

Age: -

MAPRE1

Mlig455_005266 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: EB1-like C-terminal motif [PF03271.19, score=48.5]; Calponin homology (CH) domain [PF00307.33, score=45.1]} {Human: ENSG00000101367, MAPRE1, microtubule associated protein RP/EB family member 1, [Score=236, Expect=3e-77]; ENSG00000084764, MAPRE3, microtubule associated protein RP/EB family member 3, [Score=229, Expect=4e-74]} {Mouse: ENSMUSG00000027479, Mapre1, microtubule-associated protein, RP/EB family, member 1, [Score=235, Expect=5e-77]; ENSMUSG00000029166, Mapre3, microtubule-associated protein, RP/EB family, member 3, [Score=226, Expect=4e-73]} {Dmel: FBgn0027066, Eb1, [Score=243, Expect=1e-79]} {Celegans: WBGene00013344, ebp-1, Microtubule End Binding Protein, [Score=199, Expect=2e-62]} {Smed: dd_Smed_v6_1322_0_2, dd_Smed_v6_1322_0_2, [Score=286, Expect=2e-96]} {RNA1509_15908} {RNA1310_22066, RNA1509_15908} {RNA1509_15908, RNA815_24384}

Cumulative graph for MligTC455_49624

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.784	3.749	0.18810	0.82066
RegionR2	0.61	3.749	0.36047	0.75530
RegionR3	0.259	3.749	0.65519	1.00000
RegionR4	0.973	3.749	0.17820	0.44680
RegionR5	-0.194	3.749	0.77906	1.00000
RegionR6	0.195	3.749	0.74189	1.00000
RegionR7	0.922	3.749	0.14891	0.71776
RegionR8	0.02	3.749	0.97088	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.247	3.749	0.54006	1.00000
RegenerationR2	-0.442	3.749	0.40973	0.82022
RegenerationR3	-0.219	3.749	0.71662	0.95404
RegenerationR4	-0.649	3.749	0.31554	0.75488
RegenerationR5	-0.478	3.749	0.43039	0.81835
RegenerationR6	-0.435	3.749	0.47867	0.79100
RegenerationBL	-0.536	3.749	0.40697	0.77624
RegenerationTP	-0.805	3.749	0.26177	0.70945

Genes with expression patterns similar to MligTC455_49624

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49624	487	10.14	Mlig455_005266	Neo: - Age: -	MAPRE1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005266 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: EB1-like C-terminal motif [PF03271.19, score=48.5]; Calponin homology (CH) domain [PF00307.33, score=45.1]} {Human: ENSG00000101367, MAPRE1, microtubule associated protein RP/EB family member 1, [Score=236, Expect=3e-77]; ENSG00000084764, MAPRE3, microtubule associated protein RP/EB family member 3, [Score=229, Expect=4e-74]} {Mouse: ENSMUSG00000027479, Mapre1, microtubule-associated protein, RP/EB family, member 1, [Score=235, Expect=5e-77]; ENSMUSG00000029166, Mapre3, microtubule-associated protein, RP/EB family, member 3, [Score=226, Expect=4e-73]} {Dmel: FBgn0027066, Eb1, [Score=243, Expect=1e-79]} {Celegans: WBGene00013344, ebp-1, Microtubule End Binding Protein, [Score=199, Expect=2e-62]} {Smed: dd_Smed_v6_1322_0_2, dd_Smed_v6_1322_0_2, [Score=286, Expect=2e-96]} {RNA1509_15908} {RNA1310_22066, RNA1509_15908} {RNA1509_15908, RNA815_24384}
2.	MligTC455_39794	787	16.39	Mlig455_051184	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.481		2.438	-	-	0.737	0.956	-	0.745	Mlig455_051184 {REF} {Length: 1501} {TRANSSPLICED} {Smed: dd_Smed_v6_2398_0_1, dd_Smed_v6_2398_0_1, [RH, Score=167, Expect=1e-50]} {RNA1509_25151} {RNA1310_14303.1} {RNA815_5283}
3.	MligTC455_49023	593	12.35	Mlig455_008741	Neo: - Age: -		1.859	0.955	-	-	-	-	0.904	Mlig455_008741 {REF} {Length: 1695} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=24.8]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=18.8]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=129, Expect=3e-35]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1}
4.	MligTC455_38958	335	6.98	Mlig455_068315	Neo: - Age: -		1.747	0.953	-	-	-	-	0.794	Mlig455_068315 {REF} {Length: 2665} {Pfam: EF-hand domain [PF13405.8, score=31.1]; EF-hand domain pair [PF13499.8, score=27.3]; EF hand [PF00036.34, score=22.7]} {Mouse: ENSMUSG00000030321, Efcab12, EF-hand calcium binding domain 12, [RH, Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_10608_0_1, dd_Smed_v6_10608_0_1, [RH, Score=57.8, Expect=7e-10]} {RNA1509_20232} {RNA1310_17116} {RNA815_14272}
5.	MligTC455_53545	764	15.92	Mlig455_025899	Neo: - Age: logFC(26M/2M)=0.796	HELT	1.718	-	-	0.758	-	-	0.960	Mlig455_025899 {REF} {Length: 2919} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=43.8]} {Human: ENSG00000187821, HELT, helt bHLH transcription factor, [Score=68.2, Expect=1e-12]} {Mouse: ENSMUSG00000047171, Helt, helt bHLH transcription factor, [Score=68.6, Expect=6e-13]} {Dmel: FBgn0027788, Hey, Hairy/E(spl)-related with YRPW motif, [Score=66.2, Expect=1e-11]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=60.5, Expect=3e-10]} {RNA1509_12426, RNA1509_49122} {RNA1310_18992.1, RNA1509_49122} {RNA1509_49122, RNA815_16883}
6.	MligTC455_47243	2524	52.57	Mlig455_031222	Neo: - Age: logFC(26M/2M)=-0.686 Region-specific R2: 1.604		1.707	-	0.756	-	0.951	-	-	Mlig455_031222 {REF} {Length: 1070} {RNA1509_32794, RNA1509_7851} {RNA1310_32192.2, RNA1509_32794, RNA1509_7851} {RNA1509_32794, RNA1509_7851, RNA815_17164}
7.	MligTC455_20617	496	10.34	Mlig455_042815	Neo: - Age: - Region-enriched R4: 2.359/0.00937		1.667	0.715	-	-	-	-	0.952	Mlig455_042815 {REF} {Length: 2561} {Smed: dd_Smed_v6_17729_0_1, dd_Smed_v6_17729_0_1, [RH, Score=58.9, Expect=2e-09]} {RNA1509_51521} {RNA1310_20020} {RNA815_8964}
8.	MligTC455_09823	198	4.12	Mlig455_060176, Mlig455_067096	Neo: - Age: logFC(26M/2M)=-0.746		0.974	-	-	-	0.974	-	-	Mlig455_060176 {REF} {Length: 1969} {RNA1509_16354} {RNA1310_14269} {RNA815_19496} Mlig455_067096 {REF} {Length: 1963} {RNA1509_16354} {RNA1310_14269} {RNA815_19496}
9.	MligTC455_20055	276	5.74	Mlig455_044020	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_044020 {REF} {Length: 1350} {RNA1509_21519} {RNA1310_17650} {RNA815_8611}
10.	MligTC455_49746	536	11.16	Mlig455_050310	Neo: - Age: -	PRDM9	0.965	0.965	-	-	-	-	-	Mlig455_050310 {REF} {Length: 2655} {Pfam: SET domain [PF00856.30, score=28.5]} {Human: ENSG00000164256, PRDM9, PR/SET domain 9, [RH, Score=120, Expect=2e-28]; ENSG00000126856, PRDM7, PR/SET domain 7, [RH, Score=115, Expect=2e-26]} {Mouse: ENSMUSG00000051977, Prdm9, PR domain containing 9, [RH, Score=118, Expect=4e-29]} {Dmel: FBgn0035625, Blimp-1, [Score=86.7, Expect=5e-17]} {Celegans: WBGene00011887, set-17, SET (Trithorax/polycomb) domain containing, [RH, Score=98.6, Expect=1e-22]} {Smed: dd_Smed_v6_11514_0_1, dd_Smed_v6_11514_0_1, [RH, Score=65.5, Expect=9e-11]} {RNA1509_57038} {RNA1310_16603.2} {RNA815_10532}
11.	MligTC455_51518	162	3.36	Mlig455_037043	Neo: - Age: - Region-enriched R7: 3.715/0.00000		0.958	-	-	-	0.958	-	-	Mlig455_037043 {REF} {Length: 4631} {RNA1509_45796} {RNA1310_11885, RNA1509_45796} {RNA1509_45796, RNA815_30863}
12.	MligTC455_46573	286	5.95	Mlig455_016766	Neo: - Age: -	NEK11	0.957	-	-	-	-	-	0.957	Mlig455_016766 {REF} {Length: 3686} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=200.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.7]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [RH, Score=338, Expect=1e-108]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [RH, Score=328, Expect=6e-103]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=167, Expect=6e-43]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=184, Expect=8e-49]} {Smed: dd_Smed_v6_9098_0_1, dd_Smed_v6_9098_0_1, [RH, Score=336, Expect=1e-106]} {RNA1509_18086} {RNA1310_9923.1} {RNA815_8184}
13.	MligTC455_08856	1473	30.7	Mlig455_041432, Mlig455_061381	Neo: - Age: Down-Up-Down Region-enriched R2: 1.073/0.04245		0.956	-	-	-	-	-	0.956	Mlig455_041432 {REF} {Length: 1824} {RNA1509_30871, RNA1509_7020} {RNA1310_16329.1, RNA1509_30871, RNA1509_7020} {RNA1509_30871, RNA1509_7020, RNA815_9026} Mlig455_061381 {REF} {Length: 1431} {RNA1509_30871} {RNA1310_16329.2} {RNA815_9026}
14.	MligTC455_43702	231	4.82	Mlig455_023865	Neo: Irradiation Age: -	SLIT1	0.954	-	-	-	0.954	-	-	Mlig455_023865 {REF} {Length: 4963} {Pfam: Leucine rich repeat [PF13855.8, score=60.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.2]; Leucine Rich Repeat [PF00560.35, score=25.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=84.7, Expect=6e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=78.6, Expect=1e-14]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=134, Expect=1e-33]} {RNA1509_13979, RNA1509_41843, RNA1509_57264} {RNA1310_10154.1, RNA1509_41843, RNA1509_57264} {RNA1509_41843, RNA1509_57264, RNA815_4611}
15.	MligTC455_40833	1043	21.73	Mlig455_000178	Neo: - Age: logFC(26M/2M)=-0.724		0.952	-	-	-	0.952	-	-	Mlig455_000178 {REF} {Length: 1419} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=51.2, Expect=1e-07]} {RNA1509_23138} {RNA1310_23456.1} {RNA815_37333}
16.	MligTC455_40834	509	10.61	Mlig455_067713	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.796		0.95	-	-	-	0.950	-	-	Mlig455_067713 {REF} {Length: 1423} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_23138} {RNA1310_23456.1} {RNA815_37333}

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