Data search
Results for MligTC455_49805
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49805 | 674 | 14.04 | Mlig455_008078 | Neo: Irradiation Age: - |
DDX31 | Mlig455_008078 {REF} {Length: 2517} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.5]; Helicase conserved C-terminal domain [PF00271.33, score=56.4]; Type III restriction enzyme, res subunit [PF04851.17, score=32.0]; Domain of unknown function (DUF4217) [PF13959.8, score=26.5]; AAA domain [PF13401.8, score=21.8]} {Human: ENSG00000125485, DDX31, DEAD-box helicase 31, [RH, Score=296, Expect=2e-89]} {Mouse: ENSMUSG00000026806, Ddx31, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31, [RH, Score=303, Expect=1e-92]} {Dmel: FBgn0027602, CG8611, [RH, Score=278, Expect=2e-81]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [Score=204, Expect=2e-57]} {Smed: dd_Smed_v6_10378_0_1, dd_Smed_v6_10378_0_1, [RH, Score=334, Expect=3e-104]} {RNA1509_5928} {RNA1310_9264} {RNA815_9440.1} |
Cumulative graph for MligTC455_49805
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.116 | 4.271 | 0.91270 | 1.00000 | |
| RegionR2 | 0.229 | 4.271 | 0.63827 | 0.97672 | |
| RegionR3 | -0.616 | 4.271 | 0.12895 | 0.61694 | |
| RegionR4 | 0.979 | 4.271 | 0.02492 | 0.11901 | |
| RegionR5 | 0.299 | 4.271 | 0.36448 | 0.71685 | |
| RegionR6 | -0.921 | 4.271 | 0.02552 | 0.29151 | |
| RegionR7 | -0.139 | 4.271 | 0.79859 | 1.00000 | |
| RegionR8 | 0.053 | 4.271 | 0.93908 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.945 | 4.271 | 0.56143 | 1.00000 | |
| RegenerationR2 | -0.043 | 4.271 | 0.91241 | 1.00000 | |
| RegenerationR3 | 0.086 | 4.271 | 0.85532 | 0.99967 | |
| RegenerationR4 | -0.778 | 4.271 | 0.07291 | 0.42933 | |
| RegenerationR5 | 0.09 | 4.271 | 0.81958 | 0.99417 | |
| RegenerationR6 | 0.922 | 4.271 | 0.04412 | 0.26257 | |
| RegenerationBL | -0.26 | 4.271 | 0.66595 | 0.99965 | |
| RegenerationTP | -0.585 | 4.271 | 0.36179 | 0.80178 |
Genes with expression patterns similar to MligTC455_49805
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49805 | 674 | 14.04 | Mlig455_008078 | Neo: Irradiation Age: - |
DDX31 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008078 {REF} {Length: 2517} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.5]; Helicase conserved C-terminal domain [PF00271.33, score=56.4]; Type III restriction enzyme, res subunit [PF04851.17, score=32.0]; Domain of unknown function (DUF4217) [PF13959.8, score=26.5]; AAA domain [PF13401.8, score=21.8]} {Human: ENSG00000125485, DDX31, DEAD-box helicase 31, [RH, Score=296, Expect=2e-89]} {Mouse: ENSMUSG00000026806, Ddx31, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31, [RH, Score=303, Expect=1e-92]} {Dmel: FBgn0027602, CG8611, [RH, Score=278, Expect=2e-81]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [Score=204, Expect=2e-57]} {Smed: dd_Smed_v6_10378_0_1, dd_Smed_v6_10378_0_1, [RH, Score=334, Expect=3e-104]} {RNA1509_5928} {RNA1310_9264} {RNA815_9440.1} |
| 2. | MligTC455_49804 | 1355 | 28.23 | Mlig455_007934, Mlig455_008037 | Neo: Irradiation Age: logFC(26M/2M)=0.227 |
DDX31 | 5.932 | 0.951 | 0.995 | 0.990 | 0.997 | 1.000 | 0.999 | Mlig455_007934 {REF} {Length: 2468} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=142.1]; Helicase conserved C-terminal domain [PF00271.33, score=56.6]; Type III restriction enzyme, res subunit [PF04851.17, score=31.9]; Domain of unknown function (DUF4217) [PF13959.8, score=26.5]; AAA domain [PF13401.8, score=21.7]} {Human: ENSG00000125485, DDX31, DEAD-box helicase 31, [RH, Score=301, Expect=4e-91]} {Mouse: ENSMUSG00000026806, Ddx31, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31, [RH, Score=307, Expect=4e-94]} {Dmel: FBgn0027602, CG8611, [RH, Score=279, Expect=1e-81]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [Score=204, Expect=2e-57]} {Smed: dd_Smed_v6_10378_0_1, dd_Smed_v6_10378_0_1, [RH, Score=336, Expect=7e-105]} {RNA1509_27957, RNA1509_5928} {RNA1310_9264, RNA1509_27957, RNA1509_5928} {RNA1509_27957, RNA1509_5928, RNA815_9440.1} Mlig455_008037 {REF} {Length: 2468} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=142.1]; Helicase conserved C-terminal domain [PF00271.33, score=56.6]; Type III restriction enzyme, res subunit [PF04851.17, score=32.0]; Domain of unknown function (DUF4217) [PF13959.8, score=26.5]; AAA domain [PF13401.8, score=21.8]} {Human: ENSG00000125485, DDX31, DEAD-box helicase 31, [RH, Score=300, Expect=1e-90]} {Mouse: ENSMUSG00000026806, Ddx31, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31, [RH, Score=306, Expect=5e-94]} {Dmel: FBgn0027602, CG8611, [RH, Score=278, Expect=3e-81]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [Score=203, Expect=3e-57]} {Smed: dd_Smed_v6_10378_0_1, dd_Smed_v6_10378_0_1, [RH, Score=338, Expect=6e-106]} {RNA1509_5928} {RNA1310_9264} {RNA815_9440.1} |
| 3. | MligTC455_43606 | 1674 | 34.88 | Mlig455_007946, Mlig455_008046, Mlig455_008088 | Neo: - Age: - Region-enriched R5: 1.300/0.00098 |
HNRNPR, SYNCRIP | 1.865 | - | - | - | 0.912 | 0.953 | - | Mlig455_007946 {REF} {Length: 2555} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008046 {REF} {Length: 2528} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008088 {REF} {Length: 2551} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=88.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.5]; LisH [PF08513.13, score=29.5]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=223, Expect=2e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=224, Expect=2e-63]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=2e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=237, Expect=2e-69]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=1e-57]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=132, Expect=7e-32]} {RNA1509_26124, RNA1509_26907} {RNA1310_13847.3, RNA1509_26124, RNA1509_26907} {RNA1509_26124, RNA1509_26907, RNA815_19802} |
| 4. | MligTC455_33055 | 1249 | 26.02 | Mlig455_051118 | Neo: Irradiation Age: Up-Down-Down |
ZFR2 | 1.8 | - | - | - | 0.837 | 0.963 | - | Mlig455_051118 {REF} {Length: 3998} {Pfam: DZF domain [PF07528.16, score=182.4]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=342, Expect=3e-103]} {Mouse: ENSMUSG00000034949, Zfr2, zinc finger RNA binding protein 2, [RH, Score=346, Expect=2e-105]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [Score=351, Expect=3e-107]} {Celegans: WBGene00022388, Y95B8A.8, [Score=188, Expect=8e-50]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [Score=386, Expect=6e-121]} {RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764} {RNA1310_7733.1, RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764} {RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764, RNA815_8736} |
| 5. | MligTC455_36358 | 787 | 16.41 | Mlig455_024262 | Neo: Int S/G2/M Age: - |
PEX6 | 1.778 | - | - | - | 0.814 | 0.964 | - | Mlig455_024262 {REF} {Length: 2032} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=176.5]; AAA ATPase domain [PF13191.8, score=40.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=38.8]; AAA domain [PF13401.8, score=34.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.7]; TIP49 P-loop domain [PF06068.15, score=25.7]; AAA+ lid domain [PF17862.3, score=24.0]; AAA domain [PF13671.8, score=23.5]; RNA helicase [PF00910.24, score=23.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.8]; Rad17 P-loop domain [PF03215.17, score=21.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=19.5]; AAA domain [PF13238.8, score=19.3]; IstB-like ATP binding protein [PF01695.19, score=18.3]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.0]} {Human: ENSG00000124587, PEX6, peroxisomal biogenesis factor 6, [Score=278, Expect=8e-82]} {Mouse: ENSMUSG00000002763, Pex6, peroxisomal biogenesis factor 6, [Score=273, Expect=4e-80]} {Dmel: FBgn0033564, Pex6, Peroxin 6, [Score=256, Expect=2e-74]} {Celegans: WBGene00004195, prx-6, PEX6; PeRoXisome assembly factor; Pex6p homolog, [Score=233, Expect=2e-67]} {Smed: dd_Smed_v6_6906_0_1, dd_Smed_v6_6906_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_16683} {RNA1310_5166.1} {RNA815_11050} |
| 6. | MligTC455_30306 | 147 | 3.06 | Mlig455_029651 | Neo: - Age: logFC(26M/2M)=-0.342 Region-enriched R5: 1.839/0.00256 |
CASP7 | 1.707 | - | - | - | - | 0.964 | 0.743 | Mlig455_029651 {REF} {Length: 4026} {Pfam: Caspase domain [PF00656.24, score=60.8]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=83.6, Expect=1e-18]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=84.0, Expect=3e-19]; ENSMUSG00000027997, Casp6, caspase 6, [Score=80.1, Expect=6e-18]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=64.3, Expect=2e-12]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=2e-09]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=80.9, Expect=1e-18]} {RNA1509_33490, RNA1509_44077} {RNA1310_23085, RNA1509_33490, RNA1509_44077} {RNA1509_33490, RNA1509_44077, RNA815_9619} |
| 7. | MligTC455_07571 | 7 | 0.15 | Mlig455_014556 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_014556 {REF} {Length: 357} {NoTransDecoderORF} | |
| 8. | MligTC455_49561 | 913 | 19.03 | Mlig455_024913 | Neo: Int S/G2/M Age: Down-Up-Up |
DMAC2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_024913 {REF} {Length: 1199} {TRANSSPLICED} {Human: ENSG00000105341, DMAC2, distal membrane arm assembly complex 2, [RH, Score=70.9, Expect=1e-13]} {Celegans: WBGene00021815, Y53G8AR.8, [RH, Score=82.8, Expect=1e-17]} {Smed: dd_Smed_v6_4736_0_1, dd_Smed_v6_4736_0_1, [RH, Score=109, Expect=8e-28]} {RNA1509_11705, RNA1509_16933} {RNA1310_26987.1, RNA1509_16933} {RNA1509_16933, RNA815_12711} |
| 9. | MligTC455_44351 | 1127 | 23.48 | Mlig455_021822 | Neo: Int S/G2/M Age: - |
KCMF1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_021822 {REF} {Length: 2363} {TRANSSPLICED} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=48.2]; Zinc finger, ZZ type [PF00569.19, score=41.5]} {Human: ENSG00000176407, KCMF1, potassium channel modulatory factor 1, [RH, Score=172, Expect=6e-49]} {Mouse: ENSMUSG00000055239, Kcmf1, potassium channel modulatory factor 1, [RH, Score=172, Expect=6e-49]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [RH, Score=160, Expect=6e-43]} {Celegans: WBGene00022785, ZK652.6, [RH, Score=110, Expect=8e-26]} {Smed: dd_Smed_v6_9359_0_1, dd_Smed_v6_9359_0_1, [RH, Score=139, Expect=4e-36]} {RNA1509_8498} {RNA1310_776, RNA1509_8498} {RNA1509_8498, RNA815_10082} |