TomoSeq data search

Data search

Results for MligTC455_49859

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49859

608

12.67

Mlig455_037451, Mlig455_037499

Neo: -

Age: -

AL031281.2, CDC42

Mlig455_037451 {REF} {Length: 2465} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=123.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=34.5]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=246, Expect=3e-84]; ENSG00000070831, CDC42, cell division cycle 42, [Score=246, Expect=3e-84]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=246, Expect=2e-84]} {Dmel: FBgn0010341, Cdc42, [Score=247, Expect=6e-85]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=242, Expect=8e-83]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=243, Expect=2e-83]} {RNA1509_44188} {RNA1310_62417} {RNA815_18622}

Mlig455_037499 {REF} {Length: 2174} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=183.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=67.9]; ADP-ribosylation factor family [PF00025.23, score=27.0]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=337, Expect=2e-119]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=337, Expect=2e-119]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=337, Expect=1e-119]} {Dmel: FBgn0010341, Cdc42, [RH, Score=335, Expect=4e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=328, Expect=2e-116]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=330, Expect=5e-117]} {RNA1509_55232} {RNA1310_42394, RNA1509_55232} {RNA1509_55232, RNA815_18622}

Cumulative graph for MligTC455_49859

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.678	3.941	0.21839	0.86058
RegionR2	1.447	3.941	0.00439	0.05904
RegionR3	-0.06	3.941	0.89383	1.00000
RegionR4	-1.249	3.941	0.02065	0.10442
RegionR5	-0.6	3.941	0.15684	0.41553
RegionR6	0.034	3.941	0.93501	1.00000
RegionR7	0.931	3.941	0.05886	0.46575
RegionR8	1.175	3.941	0.04962	0.43720

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.089	3.941	0.36129	1.00000
RegenerationR2	0.248	3.941	0.52991	0.88429
RegenerationR3	0.636	3.941	0.19141	0.62659
RegenerationR4	0.38	3.941	0.46101	0.84791
RegenerationR5	0.477	3.941	0.29798	0.72559
RegenerationR6	0.268	3.941	0.58603	0.86142
RegenerationBL	-0.207	3.941	0.70204	1.00000
RegenerationTP	0.228	3.941	0.67447	1.00000

Genes with expression patterns similar to MligTC455_49859

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49859	608	12.67	Mlig455_037451, Mlig455_037499	Neo: - Age: -	AL031281.2, CDC42	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037451 {REF} {Length: 2465} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=123.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=34.5]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=246, Expect=3e-84]; ENSG00000070831, CDC42, cell division cycle 42, [Score=246, Expect=3e-84]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=246, Expect=2e-84]} {Dmel: FBgn0010341, Cdc42, [Score=247, Expect=6e-85]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=242, Expect=8e-83]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=243, Expect=2e-83]} {RNA1509_44188} {RNA1310_62417} {RNA815_18622} Mlig455_037499 {REF} {Length: 2174} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=183.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=67.9]; ADP-ribosylation factor family [PF00025.23, score=27.0]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=337, Expect=2e-119]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=337, Expect=2e-119]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=337, Expect=1e-119]} {Dmel: FBgn0010341, Cdc42, [RH, Score=335, Expect=4e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=328, Expect=2e-116]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=330, Expect=5e-117]} {RNA1509_55232} {RNA1310_42394, RNA1509_55232} {RNA1509_55232, RNA815_18622}
2.	MligTC455_48706	477	9.94	Mlig455_000191	Neo: - Age: Down-Up-Down	SLC16A12	1.828	0.863	-	-	-	0.965	-	Mlig455_000191 {REF} {Length: 2035} {Pfam: Major Facilitator Superfamily [PF07690.18, score=96.1]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=108, Expect=1e-24]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=108, Expect=6e-25]; ENSMUSG00000041920, Slc16a6, solute carrier family 16 (monocarboxylic acid transporters), member 6, [Score=107, Expect=2e-24]} {Dmel: FBgn0033657, Sln, Silnoon, [Score=105, Expect=2e-23]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=82.8, Expect=2e-16]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [Score=55.5, Expect=6e-08]} {RNA1509_47586} {RNA1310_16175} {RNA815_10056}
3.	MligTC455_48681	294	6.12	Mlig455_051288	Neo: - Age: - Region-enriched R7: 3.136/0.00031		0.974	-	-	-	0.974	-	-	Mlig455_051288 {REF} {Length: 1014} {TRANSSPLICED} {Pfam: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=18.7]; Intermediate filament protein [PF00038.23, score=18.6]} {RNA1509_35605} {RNA1310_32127, RNA1509_35605} {RNA1509_35605, RNA815_14536}
4.	MligTC455_15595	114	2.37	Mlig455_009340	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_009340 {REF} {Length: 1538} {TRANSSPLICED} {RNA1310_41965} {RNA815_27810}
5.	MligTC455_46162	320	6.67	Mlig455_008014	Neo: - Age: Down-Up-Down		0.965	-	-	0.965	-	-	-	Mlig455_008014 {REF} {Length: 1913} {RNA1509_43120} {RNA1310_22234, RNA1509_43120} {RNA1509_43120, RNA815_35898}
6.	MligTC455_37054	19	0.39	Mlig455_048861	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_048861 {REF} {Length: 729} {NoTransDecoderORF} {RNA1509_38267} {RNA1310_97394}
7.	MligTC455_38359	429	8.94	Mlig455_043377, Mlig455_066317	Neo: - Age: Down-Up-Down		0.96	-	-	-	0.960	-	-	Mlig455_043377 {REF} {Length: 4662} {Pfam: Sleepless protein [PF17064.7, score=26.3]} {Dmel: FBgn0051323, CG31323, [Score=89.4, Expect=7e-23]} {Celegans: WBGene00044176, C30G7.2, [RH, Score=96.3, Expect=2e-25]} {RNA1310_47819} {RNA815_18638} Mlig455_066317 {REF} {Length: 3561} {Pfam: Sleepless protein [PF17064.7, score=26.3]} {Dmel: FBgn0051323, CG31323, [Score=89.4, Expect=7e-23]} {Celegans: WBGene00044176, C30G7.2, [RH, Score=96.3, Expect=2e-25]} {RNA1310_26292.1} {RNA815_18638}
8.	MligTC455_14738	140	2.92	Mlig455_044382	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.555 Region-enriched R8: 3.007/0.01820	BMP2	0.956	-	-	0.956	-	-	-	Mlig455_044382 {REF} {Length: 3994} {Pfam: Transforming growth factor beta like domain [PF00019.22, score=102.6]; TGF-beta propeptide [PF00688.20, score=57.9]} {Human: ENSG00000125845, BMP2, bone morphogenetic protein 2, [RH, Score=156, Expect=5e-43]; ENSG00000125378, BMP4, bone morphogenetic protein 4, [RH, Score=149, Expect=4e-40]} {Mouse: ENSMUSG00000027358, Bmp2, bone morphogenetic protein 2, [RH, Score=159, Expect=3e-44]} {Dmel: FBgn0000490, dpp, decapentaplegic, [RH, Score=142, Expect=5e-37]} {Celegans: WBGene00000936, dbl-1, DPP/BMP-Like; Decapentaplegic protein homolog, [Score=114, Expect=4e-28]} {Smed: dd_Smed_v6_12939_2_1, dd_Smed_v6_12939_2_1, [RH, Score=228, Expect=7e-70]} {RNA1310_15976.1} {RNA815_13484}
9.	MligTC455_52886	457	9.52	Mlig455_060949	Neo: - Age: logFC(26M/2M)=0.945		0.953	-	-	-	0.953	-	-	Mlig455_060949 {REF} {Length: 1307} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=70.7]; Kazal-type serine protease inhibitor domain [PF07648.17, score=62.7]} {Dmel: FBgn0052354, CG32354, [Score=48.1, Expect=3e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_43736} {RNA1310_25866.2} {RNA815_10610.1}
10.	MligTC455_14510	383	7.98	Mlig455_010528	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.540		0.95	-	-	-	-	0.950	-	Mlig455_010528 {REF} {Length: 1078} {Pfam: Ferritin-like domain [PF13668.8, score=24.7]; UvsW.1 domain [PF11637.10, score=21.3]; Dermatopontin [PF14704.8, score=21.3]} {RNA1509_48925} {RNA1310_62268.1} {RNA815_29865.1}
11.	MligTC455_17500	206	4.3	Mlig455_058448	Neo: - Age: logFC(26M/2M)=-0.551	ANKRD44	0.95	-	-	0.950	-	-	-	Mlig455_058448 {REF} {Length: 1455} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=88.8]; Ankyrin repeats (many copies) [PF13637.8, score=74.5]; Ankyrin repeat [PF00023.32, score=52.2]; Ankyrin repeats (many copies) [PF13857.8, score=51.5]; Ankyrin repeat [PF13606.8, score=47.2]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=77.0, Expect=2e-14]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_51450} {RNA1310_16797, RNA1509_51450} {RNA1509_51450, RNA815_9033}
12.	MligTC455_43680	71	1.48	Mlig455_013499	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.886		0.95	-	-	-	-	0.950	-	Mlig455_013499 {REF} {Length: 4643} {Mouse: ENSMUSG00000089753, Cd300ld2, CD300 molecule like family member D2, [RH, Score=65.9, Expect=7e-11]} {Dmel: FBgn0052602, Muc12Ea, Mucin 12Ea, [Score=73.9, Expect=1e-12]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=51.2, Expect=7e-06]} {RNA1509_37423} {RNA1310_12865, RNA1509_37423} {RNA1509_37423, RNA815_7819}

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