Data search
Results for MligTC455_49896
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49896 | 251 | 5.23 | Mlig455_011138 | Neo: - Age: - |
GCA | Mlig455_011138 {REF} {Length: 2375} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=36.3]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=35.6]; EF hand [PF13202.8, score=25.8]} {Human: ENSG00000115271, GCA, grancalcin, [Score=52.8, Expect=4e-08]} {Mouse: ENSMUSG00000001794, Capns1, calpain, small subunit 1, [Score=48.1, Expect=1e-06]; ENSMUSG00000078144, Capns2, calpain, small subunit 2, [Score=47.4, Expect=3e-06]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=47.8, Expect=8e-07]} {Smed: dd_Smed_v6_4020_0_1, dd_Smed_v6_4020_0_1, [Score=54.3, Expect=1e-08]} {RNA1310_7291.3} {RNA815_21118} |
Cumulative graph for MligTC455_49896
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.671 | 2.93 | 0.63437 | 1.00000 | |
| RegionR2 | 1.239 | 2.93 | 0.07927 | 0.34459 | |
| RegionR3 | 0.066 | 2.93 | 0.90807 | 1.00000 | |
| RegionR4 | -0.619 | 2.93 | 0.38614 | 0.71118 | |
| RegionR5 | -0.495 | 2.93 | 0.33405 | 0.67981 | |
| RegionR6 | 0.335 | 2.93 | 0.54895 | 1.00000 | |
| RegionR7 | -0.26 | 2.93 | 0.73496 | 1.00000 | |
| RegionR8 | -0.937 | 2.93 | 0.36933 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.729 | 2.93 | 0.25725 | 0.96756 | |
| RegenerationR2 | 0.075 | 2.93 | 0.88341 | 1.00000 | |
| RegenerationR3 | 0.067 | 2.93 | 0.92160 | 1.00000 | |
| RegenerationR4 | 0.035 | 2.93 | 0.96560 | 1.00000 | |
| RegenerationR5 | 0.622 | 2.93 | 0.31658 | 0.74060 | |
| RegenerationR6 | -1.155 | 2.93 | 0.11622 | 0.41952 | |
| RegenerationBL | 0.798 | 2.93 | 0.33026 | 0.69659 | |
| RegenerationTP | 0.176 | 2.93 | 0.86422 | 1.00000 |
Genes with expression patterns similar to MligTC455_49896
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49896 | 251 | 5.23 | Mlig455_011138 | Neo: - Age: - |
GCA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011138 {REF} {Length: 2375} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=36.3]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=35.6]; EF hand [PF13202.8, score=25.8]} {Human: ENSG00000115271, GCA, grancalcin, [Score=52.8, Expect=4e-08]} {Mouse: ENSMUSG00000001794, Capns1, calpain, small subunit 1, [Score=48.1, Expect=1e-06]; ENSMUSG00000078144, Capns2, calpain, small subunit 2, [Score=47.4, Expect=3e-06]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=47.8, Expect=8e-07]} {Smed: dd_Smed_v6_4020_0_1, dd_Smed_v6_4020_0_1, [Score=54.3, Expect=1e-08]} {RNA1310_7291.3} {RNA815_21118} |
| 2. | MligTC455_28476 | 731 | 15.23 | Mlig455_060387 | Neo: - Age: logFC(26M/2M)=-0.326 Region-enriched R2: 1.963/0.00119 |
1.751 | - | - | - | 0.799 | - | 0.952 | Mlig455_060387 {REF} {Length: 5044} {Smed: dd_Smed_v6_5297_0_1, dd_Smed_v6_5297_0_1, [RH, Score=241, Expect=2e-65]} {RNA1509_3272} {RNA1310_3570} {RNA815_1056} | |
| 3. | MligTC455_34586 | 184 | 3.84 | Mlig455_055029 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.460 Region-enriched R2: 3.711/0.00138 |
SMTN | 1.735 | - | - | - | 0.952 | - | 0.783 | Mlig455_055029 {REF} {Length: 5364} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=101.5]; Immunoglobulin domain [PF13927.8, score=72.4]; Calponin homology (CH) domain [PF00307.33, score=70.5]; Immunoglobulin V-set domain [PF07686.19, score=39.8]; Immunoglobulin domain [PF00047.27, score=33.5]; Smoothelin cytoskeleton protein [PF12510.10, score=31.4]; CAMSAP CH domain [PF11971.10, score=30.9]; Immunoglobulin domain [PF13895.8, score=30.1]; Natural killer cell receptor 2B4 [PF11465.10, score=22.5]} {Human: ENSG00000183963, SMTN, smoothelin, [Score=159, Expect=6e-40]} {Mouse: ENSMUSG00000020439, Smtn, smoothelin, [Score=150, Expect=9e-39]} {Dmel: FBgn0085446, CG34417, [RH, Score=163, Expect=3e-41]} {Celegans: WBGene00020530, T15B12.1, [Score=134, Expect=8e-34]} {Smed: dd_Smed_v6_6934_0_1, dd_Smed_v6_6934_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_3882, RNA1509_55382} {RNA1310_786, RNA1509_55382} {RNA1509_55382, RNA815_238.1} |
| 4. | MligTC455_28474 | 734 | 15.29 | Mlig455_034006 | Neo: - Age: logFC(26M/2M)=-0.457 Region-enriched R2: 1.949/0.00020 |
1.682 | - | - | - | 0.731 | - | 0.951 | Mlig455_034006 {REF} {Length: 5235} {Smed: dd_Smed_v6_5297_0_1, dd_Smed_v6_5297_0_1, [Score=226, Expect=2e-60]} {RNA1509_3272} {RNA1310_3570} {RNA815_1056} | |
| 5. | MligTC455_10023 | 48 | 0.99 | Mlig455_051817 | Neo: - Age: Down-Up-Down |
0.955 | - | - | - | 0.955 | - | - | Mlig455_051817 {REF} {Length: 3330} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=46.4]} {RNA1310_7348} {RNA815_14995} |
Berezikov Lab - 2020-2021 © ERIBA