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Data search

Results for MligTC455_49985

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49985	1939	40.40	Mlig455_020391, Mlig455_028390, Mlig455_028424, Mlig455_058435	Neo: - Age: -	FGD4	Mlig455_020391 {REF} {Length: 3097} {Pfam: RhoGEF domain [PF00621.22, score=99.3]; FYVE zinc finger [PF01363.23, score=54.0]; PH domain [PF00169.31, score=32.6]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=8e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=139, Expect=1e-33]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=5e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0039492, CG6051, [Score=65.1, Expect=2e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=63.5, Expect=4e-10]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=73.6, Expect=3e-13]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953} Mlig455_028390 {REF} {Length: 3074} {Pfam: RhoGEF domain [PF00621.22, score=98.3]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726, RNA1509_8190} {RNA1509_8190, RNA815_3953} Mlig455_028424 {REF} {Length: 3066} {Pfam: RhoGEF domain [PF00621.22, score=99.6]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=4e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953} Mlig455_058435 {REF} {Length: 3002} {Pfam: RhoGEF domain [PF00621.22, score=99.5]; FYVE zinc finger [PF01363.23, score=53.7]; PH domain [PF00169.31, score=32.4]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=141, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49985

1939

40.40

Mlig455_020391, Mlig455_028390, Mlig455_028424, Mlig455_058435

Neo: -

Age: -

FGD4

Mlig455_020391 {REF} {Length: 3097} {Pfam: RhoGEF domain [PF00621.22, score=99.3]; FYVE zinc finger [PF01363.23, score=54.0]; PH domain [PF00169.31, score=32.6]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=8e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=139, Expect=1e-33]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=5e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0039492, CG6051, [Score=65.1, Expect=2e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=63.5, Expect=4e-10]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=73.6, Expect=3e-13]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953}

Mlig455_028390 {REF} {Length: 3074} {Pfam: RhoGEF domain [PF00621.22, score=98.3]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726, RNA1509_8190} {RNA1509_8190, RNA815_3953}

Mlig455_028424 {REF} {Length: 3066} {Pfam: RhoGEF domain [PF00621.22, score=99.6]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=4e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953}

Mlig455_058435 {REF} {Length: 3002} {Pfam: RhoGEF domain [PF00621.22, score=99.5]; FYVE zinc finger [PF01363.23, score=53.7]; PH domain [PF00169.31, score=32.4]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=141, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953}

Cumulative graph for MligTC455_49985

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.485	5.539	0.01242	0.31858
RegionR2	0.463	5.539	0.59194	0.94478
RegionR3	0.779	5.539	0.31007	0.84933
RegionR4	1.355	5.539	0.05500	0.20572
RegionR5	0.869	5.539	0.22995	0.53633
RegionR6	1.193	5.539	0.06582	0.48050
RegionR7	0.979	5.539	0.21380	0.83017
RegionR8	1.847	5.539	0.00984	0.18671

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	8.142	5.539	0.00545	0.36142
RegenerationR2	0.458	5.539	0.23064	0.67791
RegenerationR3	0.147	5.539	0.71970	0.95406
RegenerationR4	0.866	5.539	0.04421	0.33937
RegenerationR5	0.637	5.539	0.10223	0.48627
RegenerationR6	0.646	5.539	0.10755	0.40566
RegenerationBL	0.19	5.539	0.64891	0.98571
RegenerationTP	-0.002	5.539	0.99625	1.00000

Genes with expression patterns similar to MligTC455_49985

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49985	1939	40.4	Mlig455_020391, Mlig455_028390, Mlig455_028424, Mlig455_058435	Neo: - Age: -	FGD4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020391 {REF} {Length: 3097} {Pfam: RhoGEF domain [PF00621.22, score=99.3]; FYVE zinc finger [PF01363.23, score=54.0]; PH domain [PF00169.31, score=32.6]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=8e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=139, Expect=1e-33]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=5e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0039492, CG6051, [Score=65.1, Expect=2e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=63.5, Expect=4e-10]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=73.6, Expect=3e-13]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953} Mlig455_028390 {REF} {Length: 3074} {Pfam: RhoGEF domain [PF00621.22, score=98.3]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]; ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726, RNA1509_8190} {RNA1509_8190, RNA815_3953} Mlig455_028424 {REF} {Length: 3066} {Pfam: RhoGEF domain [PF00621.22, score=99.6]; FYVE zinc finger [PF01363.23, score=53.6]; PH domain [PF00169.31, score=32.3]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=145, Expect=4e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953} Mlig455_058435 {REF} {Length: 3002} {Pfam: RhoGEF domain [PF00621.22, score=99.5]; FYVE zinc finger [PF01363.23, score=53.7]; PH domain [PF00169.31, score=32.4]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=144, Expect=5e-35]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=141, Expect=2e-34]} {Mouse: ENSMUSG00000024013, Fgd2, FYVE, RhoGEF and PH domain containing 2, [RH, Score=147, Expect=2e-36]; ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0051064, CG31064, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_8190} {RNA1310_5726} {RNA815_3953}
2.	MligTC455_41113	631	13.14	Mlig455_053556	Neo: - Age: - Region-enriched R5: 1.520/0.04923	OPA1	0.963	-	-	-	-	-	0.963	Mlig455_053556 {REF} {Length: 3245} {TRANSSPLICED} {Pfam: Dynamin-like GTPase OPA1 C-terminal [PF19434.1, score=602.1]; Dynamin family [PF00350.25, score=122.8]; 50S ribosome-binding GTPase [PF01926.25, score=23.5]} {Human: ENSG00000198836, OPA1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=730, Expect=0.0]} {Mouse: ENSMUSG00000038084, Opa1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0261276, Opa1, Optic atrophy 1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001134, eat-3, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_7981_0_2, dd_Smed_v6_7981_0_2, [RH, Score=644, Expect=0.0]} {RNA1509_34607, RNA1509_45369} {RNA1310_4411, RNA1509_45369} {RNA1509_45369, RNA815_1436}
3.	MligTC455_47887	550	11.45	Mlig455_014875, Mlig455_014999	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 4.130 Region-enriched R4: 2.978/0.00024	FAM78A	0.957	-	-	-	-	-	0.957	Mlig455_014875 {REF} {Length: 2530} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=139, Expect=8e-38]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=113, Expect=3e-30]} {RNA1509_15013, RNA1509_50919} {RNA1310_22988, RNA1509_50919} {RNA1509_50919, RNA815_10123} Mlig455_014999 {REF} {Length: 3935} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=139, Expect=7e-38]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=138, Expect=1e-37]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=113, Expect=3e-30]} {RNA1509_15013, RNA1509_38605} {RNA1310_22988, RNA1509_15013, RNA1509_38605} {RNA1509_15013, RNA1509_38605, RNA815_10123}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49985

1939

40.4

Mlig455_020391, Mlig455_028390, Mlig455_028424, Mlig455_058435

Neo: -

Age: -

FGD4

1.000

MligTC455_41113

631

13.14

Mlig455_053556

Neo: -

Age: -

Region-enriched R5: 1.520/0.04923

OPA1

0.963

Mlig455_053556 {REF} {Length: 3245} {TRANSSPLICED} {Pfam: Dynamin-like GTPase OPA1 C-terminal [PF19434.1, score=602.1]; Dynamin family [PF00350.25, score=122.8]; 50S ribosome-binding GTPase [PF01926.25, score=23.5]} {Human: ENSG00000198836, OPA1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=730, Expect=0.0]} {Mouse: ENSMUSG00000038084, Opa1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0261276, Opa1, Optic atrophy 1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001134, eat-3, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_7981_0_2, dd_Smed_v6_7981_0_2, [RH, Score=644, Expect=0.0]} {RNA1509_34607, RNA1509_45369} {RNA1310_4411, RNA1509_45369} {RNA1509_45369, RNA815_1436}

MligTC455_47887

550

11.45

Mlig455_014875, Mlig455_014999

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.130

Region-enriched R4: 2.978/0.00024

FAM78A

0.957

Mlig455_014875 {REF} {Length: 2530} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=139, Expect=8e-38]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=113, Expect=3e-30]} {RNA1509_15013, RNA1509_50919} {RNA1310_22988, RNA1509_50919} {RNA1509_50919, RNA815_10123}

Mlig455_014999 {REF} {Length: 3935} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=139, Expect=7e-38]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=138, Expect=1e-37]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=113, Expect=3e-30]} {RNA1509_15013, RNA1509_38605} {RNA1310_22988, RNA1509_15013, RNA1509_38605} {RNA1509_15013, RNA1509_38605, RNA815_10123}