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Results for MligTC455_50071

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50071 258 5.38 Mlig455_061007

Neo: -

Age: Down-Down-Up

 Mlig455_061007 {REF} {Length: 2748} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}

Cumulative graph for MligTC455_50071

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.369 3.015 0.11375 0.69887
RegionR2 0.765 3.015 0.47967 0.86388
RegionR3 0.744 3.015 0.43361 0.95194
RegionR4 0.425 3.015 0.66763 0.96530
RegionR5 0.334 3.015 0.69508 1.00000
RegionR6 1.297 3.015 0.12713 0.64666
RegionR7 1.181 3.015 0.25376 0.88018
RegionR8 1.624 3.015 0.14561 0.69534

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.332 3.015 1.00000 1.00000
RegenerationR2 0.021 3.015 0.97412 1.00000
RegenerationR3 -0.395 3.015 0.59051 0.90383
RegenerationR4 -1.202 3.015 0.12942 0.54445
RegenerationR5 0.052 3.015 0.94148 1.00000
RegenerationR6 -0.155 3.015 0.83191 0.99206
RegenerationBL -0.644 3.015 0.43732 0.80507
RegenerationTP -0.031 3.015 0.96938 1.00000


Genes with expression patterns similar to MligTC455_50071

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50071 258 5.38 Mlig455_061007

Neo: -

Age: Down-Down-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061007 {REF} {Length: 2748} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}
2. MligTC455_48877 414 8.63 Mlig455_064220

Neo: -

Age: -

 CACNB4 1.684 - - - 0.724 - 0.960 Mlig455_064220 {REF} {Length: 3341} {Pfam: Guanylate kinase [PF00625.23, score=139.2]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=24.3]} {Human: ENSG00000182389, CACNB4, calcium voltage-gated channel auxiliary subunit beta 4, [RH, Score=318, Expect=1e-103]} {Mouse: ENSMUSG00000020882, Cacnb1, calcium channel, voltage-dependent, beta 1 subunit, [Score=325, Expect=2e-104]; ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [Score=322, Expect=1e-101]; ENSMUSG00000017412, Cacnb4, calcium channel, voltage-dependent, beta 4 subunit, [Score=318, Expect=2e-101]; ENSMUSG00000003352, Cacnb3, calcium channel, voltage-dependent, beta 3 subunit, [Score=315, Expect=2e-100]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [Score=332, Expect=7e-108]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [Score=328, Expect=4e-105]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [Score=342, Expect=3e-110]} {RNA1509_13952} {RNA1310_9640} {RNA815_20879}
3. MligTC455_37499 114 2.38 Mlig455_020237, Mlig455_039276

Neo: -

Age: logFC(26M/2M)=0.414

 TCP11L1 0.961 - - - - - 0.961

Mlig455_020237 {REF} {Length: 406}

Mlig455_039276 {REF} {Length: 3240} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.3} {Pfam: T-complex protein 11 [PF05794.15, score=302.2]} {Human: ENSG00000176148, TCP11L1, t-complex 11 like 1, [RH, Score=246, Expect=2e-74]} {Mouse: ENSMUSG00000027175, Tcp11l1, t-complex 11 like 1, [RH, Score=230, Expect=2e-68]} {Dmel: FBgn0029820, CG16721, [RH, Score=188, Expect=4e-53]} {Celegans: WBGene00010875, M05D6.2, [RH, Score=157, Expect=7e-42]} {Smed: dd_Smed_v6_5716_0_1, dd_Smed_v6_5716_0_1, [RH, Score=290, Expect=3e-92]} {RNA1509_29002, RNA1509_53348, RNA1509_8188} {RNA1310_5531, RNA1509_29002, RNA1509_53348} {RNA1509_29002, RNA1509_53348, RNA815_11726}
4. MligTC455_51109 497 10.36 Mlig455_025680

Neo: -

Age: Up-Down-Down

 CACNA2D1 0.956 - - - - - 0.956 Mlig455_025680 {REF} {Length: 4146} {TRANSSPLICED} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=80.6]; VWA N-terminal [PF08399.13, score=59.2]; von Willebrand factor type A domain [PF00092.30, score=41.4]; von Willebrand factor type A domain [PF13519.8, score=34.4]} {Human: ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=302, Expect=1e-85]} {Mouse: ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=300, Expect=5e-85]} {Dmel: FBgn0261999, CG42817, [Score=166, Expect=4e-41]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=146, Expect=3e-35]} {Smed: dd_Smed_v6_8926_0_1, dd_Smed_v6_8926_0_1, [Score=104, Expect=2e-22]} {RNA1509_10135} {RNA1310_2055.1, RNA1509_10135} {RNA1509_10135, RNA815_2646}
5. MligTC455_25791 6624 137.99 Mlig455_026535, Mlig455_036977, Mlig455_037651, Mlig455_044767, Mlig455_048877, Mlig455_048885, Mlig455_049562, Mlig455_053664, Mlig455_071136

Neo: -

Age: -

 NYNRIN 0.954 - - - - - 0.954

Mlig455_026535 {REF} {Length: 632} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_036977 {REF} {Length: 962} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_61401.1} {RNA815_24119.1}

Mlig455_037651 {REF} {Length: 4197} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.7]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=54.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.5]; H2C2 zinc finger [PF09337.12, score=23.0]; Retroviral aspartyl protease [PF00077.22, score=21.5]; Aspartyl protease [PF13650.8, score=20.9]; Integrase core domain [PF13683.8, score=20.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.9, Expect=5e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=84.3, Expect=7e-16]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=327, Expect=9e-95]} {RNA1509_41126} {RNA1310_3178} {RNA815_4850.1}

Mlig455_044767 {REF} {Length: 995} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_048877 {REF} {Length: 847} {NoTransDecoderORF} {RNA1509_56606} {RNA1310_61500} {RNA815_24119.2}

Mlig455_048885 {REF} {Length: 1005} {RNA1509_56606} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_049562 {REF} {Length: 1289} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_61500} {RNA815_24119.1}

Mlig455_053664 {REF} {Length: 994} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_071136 {REF} {Length: 1286} {RNA1509_22707} {RNA1310_61500} {RNA815_24119.1}
6. MligTC455_36023 124 2.58 Mlig455_051287

Neo: -

Age: -

 TRPM3 0.954 - - - - - 0.954 Mlig455_051287 {REF} {Length: 4788} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.0]; Ion transport protein [PF00520.33, score=63.8]; Ankyrin repeats (many copies) [PF13637.8, score=55.2]; Ankyrin repeat [PF00023.32, score=44.1]; Ankyrin repeats (many copies) [PF13857.8, score=42.4]; Ankyrin repeat [PF13606.8, score=30.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=152, Expect=2e-36]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=148, Expect=4e-35]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=148, Expect=4e-35]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=153, Expect=7e-37]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=146, Expect=9e-35]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=129, Expect=1e-29]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_17981_0_2, dd_Smed_v6_17981_0_2, [Score=195, Expect=3e-50]} {RNA1509_36155} {RNA1310_16055, RNA1509_36155} {RNA1509_36155, RNA815_25933}

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