TomoSeq data search

Data search

Results for MligTC455_50113

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50113

1813

37.77

Mlig455_030782, Mlig455_047792

Neo: -

Age: -

PCBD1

Mlig455_030782 {REF} {Length: 600} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=73.6]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [Score=101, Expect=1e-28]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [Score=103, Expect=2e-29]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [Score=105, Expect=2e-29]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [Score=107, Expect=7e-31]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [Score=94.4, Expect=5e-26]} {RNA1509_56343} {RNA1310_47859.1} {RNA815_17315.2}

Mlig455_047792 {REF} {Length: 636} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=104.1]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [RH, Score=125, Expect=5e-38]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [RH, Score=127, Expect=1e-38]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [RH, Score=130, Expect=4e-39]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [RH, Score=129, Expect=3e-39]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [RH, Score=115, Expect=4e-34]} {RNA1509_11908, RNA1509_31785, RNA1509_56343} {RNA1310_47859.1, RNA1509_11908, RNA1509_31785, RNA1509_56343} {RNA1509_11908, RNA1509_31785, RNA1509_56343, RNA815_17315.2}

Cumulative graph for MligTC455_50113

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.788	5.357	0.27077	0.92132
RegionR2	-0.044	5.357	0.91336	1.00000
RegionR3	0.155	5.357	0.63242	1.00000
RegionR4	0.478	5.357	0.19853	0.47757
RegionR5	0.809	5.357	0.00554	0.03751
RegionR6	0.176	5.357	0.59296	1.00000
RegionR7	0.164	5.357	0.64601	1.00000
RegionR8	-0.951	5.357	0.04503	0.41580

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.025	5.357	0.25383	0.96756
RegenerationR2	-0.314	5.357	0.42902	0.83317
RegenerationR3	0.198	5.357	0.63691	0.92360
RegenerationR4	-0.082	5.357	0.84390	1.00000
RegenerationR5	-0.222	5.357	0.57251	0.89690
RegenerationR6	-0.474	5.357	0.26714	0.61702
RegenerationBL	-0.984	5.357	0.05108	0.26033
RegenerationTP	0.775	5.357	0.08857	0.46910

Genes with expression patterns similar to MligTC455_50113

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50113	1813	37.77	Mlig455_030782, Mlig455_047792	Neo: - Age: -	PCBD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030782 {REF} {Length: 600} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=73.6]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [Score=101, Expect=1e-28]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [Score=103, Expect=2e-29]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [Score=105, Expect=2e-29]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [Score=107, Expect=7e-31]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [Score=94.4, Expect=5e-26]} {RNA1509_56343} {RNA1310_47859.1} {RNA815_17315.2} Mlig455_047792 {REF} {Length: 636} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=104.1]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [RH, Score=125, Expect=5e-38]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [RH, Score=127, Expect=1e-38]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [RH, Score=130, Expect=4e-39]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [RH, Score=129, Expect=3e-39]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [RH, Score=115, Expect=4e-34]} {RNA1509_11908, RNA1509_31785, RNA1509_56343} {RNA1310_47859.1, RNA1509_11908, RNA1509_31785, RNA1509_56343} {RNA1509_11908, RNA1509_31785, RNA1509_56343, RNA815_17315.2}
2.	MligTC455_09814	575	11.98	Mlig455_037640	Neo: - Age: - Region-enriched R5: 1.307/0.00616		1.709	-	-	-	0.962	-	0.747	Mlig455_037640 {REF} {Length: 4250} {RNA1509_16137} {RNA1310_16604, RNA1509_16137} {RNA1509_16137, RNA815_16640}
3.	MligTC455_29524	363	7.57	Mlig455_051259	Neo: - Age: logFC(26M/2M)=-0.309	R3HCC1	0.975	-	-	0.975	-	-	-	Mlig455_051259 {REF} {Length: 3258} {Human: ENSG00000104679, R3HCC1, R3H domain and coiled-coil containing 1, [RH, Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000034194, R3hcc1, R3H domain and coiled-coil containing 1, [RH, Score=57.4, Expect=4e-08]} {RNA1509_28279, RNA1509_51631} {RNA1310_928.1, RNA1509_28279} {RNA1509_28279, RNA815_529.1}
4.	MligTC455_33191	4370	91.03	Mlig455_031767	Neo: - Age: -	ATP6V0C	0.962	-	-	-	0.962	-	-	Mlig455_031767 {REF} {Length: 1801} {Pfam: ATP synthase subunit C [PF00137.23, score=130.0]} {Human: ENSG00000185883, ATP6V0C, ATPase H+ transporting V0 subunit c, [RH, Score=226, Expect=6e-77]} {Mouse: ENSMUSG00000024121, Atp6v0c, ATPase, H+ transporting, lysosomal V0 subunit C, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0262736, Vha16-1, Vacuolar H[+] ATPase 16kD subunit 1, [RH, Score=216, Expect=3e-73]} {Celegans: WBGene00006911, vha-2, V-type proton ATPase 16 kDa proteolipid subunit 2/3, [RH, Score=196, Expect=2e-65]} {Smed: dd_Smed_v6_253_0_1, dd_Smed_v6_253_0_1, [RH, Score=245, Expect=5e-85]} {RNA1509_7541} {RNA1310_23708} {RNA815_12911.1}
5.	MligTC455_36509	1001	20.86	Mlig455_049479	Neo: Int S/G2/M Age: -	SNRPC	0.96	-	-	0.960	-	-	-	Mlig455_049479 {REF} {Length: 827} {TRANSSPLICED} {Pfam: U1 zinc finger [PF06220.14, score=67.7]} {Human: ENSG00000124562, SNRPC, small nuclear ribonucleoprotein polypeptide C, [RH, Score=109, Expect=4e-30]} {Mouse: ENSMUSG00000024217, Snrpc, U1 small nuclear ribonucleoprotein C, [RH, Score=108, Expect=4e-30]} {Dmel: FBgn0261792, snRNP-U1-C, small ribonucleoprotein particle U1 subunit C, [RH, Score=112, Expect=1e-31]} {Celegans: WBGene00017238, F08B4.7, U1 small nuclear ribonucleoprotein C, [RH, Score=102, Expect=4e-28]} {Smed: dd_Smed_v6_3772_0_2, dd_Smed_v6_3772_0_2, [RH, Score=113, Expect=2e-32]} {RNA1509_20825, RNA1509_39188} {RNA1310_43912, RNA1509_20825, RNA1509_39188} {RNA1509_20825, RNA1509_39188, RNA815_57716}
6.	MligTC455_41725	639	13.32	Mlig455_033855	Neo: - Age: Down-Up-Up		0.96	-	-	-	0.960	-	-	Mlig455_033855 {REF} {Length: 878} {RNA1509_20205} {RNA1310_47920, RNA1509_20205} {RNA1509_20205, RNA815_23723.1}
7.	MligTC455_21565	688	14.33	Mlig455_059033, Mlig455_070845	Neo: - Age: Down-Down-Up Region-enriched R2: 4.576/0.00020 Region-enriched R3: 3.487/0.00049	GIMAP7	0.956	-	-	-	0.956	-	-	Mlig455_059033 {REF} {Length: 1784} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.7} {Pfam: AIG1 family [PF04548.18, score=136.3]; 50S ribosome-binding GTPase [PF01926.25, score=33.9]; Dynamin family [PF00350.25, score=23.0]; ABC transporter [PF00005.29, score=19.5]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=92.4, Expect=5e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=2e-24]} {RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1310_27258, RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1509_29015, RNA1509_50298, RNA1509_58568, RNA815_8194.1} Mlig455_070845 {REF} {Length: 2397} {Pfam: AIG1 family [PF04548.18, score=133.1]; 50S ribosome-binding GTPase [PF01926.25, score=35.7]; ABC transporter [PF00005.29, score=20.3]; Dynamin family [PF00350.25, score=19.4]; Septin [PF00735.20, score=19.4]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=91.7, Expect=8e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=4e-24]} {RNA1509_50298} {RNA1310_27258} {RNA815_8194.1}
8.	MligTC455_48201	494	10.28	Mlig455_048050	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_048050 {REF} {Length: 1863} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=38.8]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=29.0]} {RNA1509_18183, RNA1509_40357} {RNA1310_15828, RNA1509_18183, RNA1509_40357} {RNA1509_18183, RNA1509_40357, RNA815_16683}
9.	MligTC455_29349	929	19.36	Mlig455_056494	Neo: - Age: logFC(26M/2M)=0.405 Region-enriched R5: 2.004/0.00000	TMEM167B	0.954	-	-	-	0.954	-	-	Mlig455_056494 {REF} {Length: 925} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=38.5]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [Score=105, Expect=2e-31]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [Score=106, Expect=9e-32]} {Dmel: FBgn0040890, ksh, kish, [Score=42.4, Expect=1e-06]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=101, Expect=4e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=97.1, Expect=2e-28]} {RNA1509_19089, RNA1509_49010} {RNA1310_36992, RNA1509_19089, RNA1509_49010} {RNA1509_19089, RNA1509_49010, RNA815_17405}
10.	MligTC455_25594	546	11.38	Mlig455_010729	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_010729 {REF} {Length: 6514} {TRANSSPLICED} {RNA1509_4078} {RNA1310_3072, RNA1509_4078} {RNA1509_4078, RNA815_5186}
11.	MligTC455_32517	153	3.19	Mlig455_064987	Neo: - Age: Up-Down-Up	OTUD7B	0.951	-	-	-	-	0.951	-	Mlig455_064987 {REF} {Length: 3738} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=67.6]; A20-like zinc finger [PF01754.18, score=22.3]} {Human: ENSG00000264522, OTUD7B, OTU deubiquitinase 7B, [RH, Score=251, Expect=6e-72]} {Mouse: ENSMUSG00000038495, Otud7b, OTU domain containing 7B, [RH, Score=251, Expect=5e-72]; ENSMUSG00000033510, Otud7a, OTU domain containing 7A, [RH, Score=247, Expect=1e-71]} {Dmel: FBgn0037734, trbd, trabid, [Score=125, Expect=3e-29]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [RH, Score=238, Expect=4e-69]} {Smed: dd_Smed_v6_10637_0_1, dd_Smed_v6_10637_0_1, [Score=246, Expect=3e-73]} {RNA1509_13944} {RNA1310_14040.1} {RNA815_8064}

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