Data search
Results for MligTC455_50116
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50116 | 1099 | 22.90 | Mlig455_032096 | Neo: - Age: - Region-enriched R4: 1.157/0.04188 |
Mlig455_032096 {REF} {Length: 1348} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=59.1]} {RNA1509_23326} {RNA1310_24665.2, RNA1509_23326} {RNA1509_23326, RNA815_9894.1} |
Cumulative graph for MligTC455_50116
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.201 | 4.851 | 0.85273 | 1.00000 | |
| RegionR2 | -0.548 | 4.851 | 0.21368 | 0.57916 | |
| RegionR3 | -0.416 | 4.851 | 0.25945 | 0.80325 | |
| RegionR4 | 1.157 | 4.851 | 0.00600 | 0.04188 | |
| RegionR5 | 0.301 | 4.851 | 0.35534 | 0.70601 | |
| RegionR6 | -0.046 | 4.851 | 0.90047 | 1.00000 | |
| RegionR7 | 0.559 | 4.851 | 0.19252 | 0.79766 | |
| RegionR8 | -0.805 | 4.851 | 0.23410 | 0.84897 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.235 | 4.851 | 0.86876 | 1.00000 | |
| RegenerationR2 | 0.412 | 4.851 | 0.25085 | 0.69740 | |
| RegenerationR3 | 0.436 | 4.851 | 0.27254 | 0.70691 | |
| RegenerationR4 | -0.208 | 4.851 | 0.60166 | 0.91392 | |
| RegenerationR5 | 0.232 | 4.851 | 0.51779 | 0.86836 | |
| RegenerationR6 | 0.294 | 4.851 | 0.45316 | 0.77275 | |
| RegenerationBL | -0.1 | 4.851 | 0.83515 | 1.00000 | |
| RegenerationTP | -0.122 | 4.851 | 0.82378 | 1.00000 |
Genes with expression patterns similar to MligTC455_50116
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50116 | 1099 | 22.9 | Mlig455_032096 | Neo: - Age: - Region-enriched R4: 1.157/0.04188 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032096 {REF} {Length: 1348} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=59.1]} {RNA1509_23326} {RNA1310_24665.2, RNA1509_23326} {RNA1509_23326, RNA815_9894.1} | |
| 2. | MligTC455_50048 | 946 | 19.71 | Mlig455_056892 | Neo: - Age: Down-Up-Up |
CLYBL | 1.788 | - | - | - | 0.957 | - | 0.831 | Mlig455_056892 {REF} {Length: 1244} {TRANSSPLICED} {Pfam: HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=137.9]; C-C_Bond_Lyase of the TIM-Barrel fold [PF15617.8, score=41.0]} {Human: ENSG00000125246, CLYBL, citrate lyase beta like, [RH, Score=192, Expect=5e-58]} {Mouse: ENSMUSG00000025545, Clybl, citrate lyase beta like, [RH, Score=185, Expect=2e-55]} {Celegans: WBGene00007234, C01G10.7, [RH, Score=201, Expect=3e-62]} {Smed: dd_Smed_v6_4186_0_1, dd_Smed_v6_4186_0_1, [RH, Score=190, Expect=8e-58]} {RNA1509_21343} {RNA1310_26559, RNA1509_21343} {RNA1509_21343, RNA815_12048} |
| 3. | MligTC455_30971 | 714 | 14.87 | Mlig455_008820, Mlig455_008918 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.746/0.00005 |
MSH6 | 1.777 | - | - | - | 0.971 | 0.806 | - | Mlig455_008820 {REF} {Length: 4904} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=245.5]; MutS domain I [PF01624.22, score=121.2]; MutS domain III [PF05192.20, score=110.7]; PWWP domain [PF00855.19, score=49.6]; MutS family domain IV [PF05190.20, score=32.2]; MutS domain II [PF05188.19, score=26.6]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [RH, Score=997, Expect=0.0]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [RH, Score=1016, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [RH, Score=826, Expect=0.0]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_15463_0_1, dd_Smed_v6_15463_0_1, [RH, Score=862, Expect=0.0]} {RNA1509_49698, RNA1509_8873} {RNA1310_1357.1, RNA1509_49698, RNA1509_8873} {RNA1509_49698, RNA1509_8873, RNA815_8019} Mlig455_008918 {REF} {Length: 5066} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=111.5]; MutS family domain IV [PF05190.20, score=33.0]; MutS domain II [PF05188.19, score=27.8]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=764, Expect=0.0]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=775, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [Score=620, Expect=0.0]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=556, Expect=0.0]} {Smed: dd_Smed_v6_15463_0_1, dd_Smed_v6_15463_0_1, [Score=666, Expect=0.0]} {RNA1509_8873} {RNA1310_1357.1} {RNA815_8507} |
| 4. | MligTC455_41638 | 836 | 17.41 | Mlig455_048407 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.265 Region-enriched R5: 1.975/0.00281 |
1.696 | - | - | - | 0.975 | - | 0.721 | Mlig455_048407 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=27.7]; Ankyrin repeats (3 copies) [PF12796.9, score=21.2]; Ankyrin repeat [PF00023.32, score=20.4]; Ankyrin repeat [PF13606.8, score=18.9]} {RNA1509_12522} {RNA1310_20494, RNA1509_12522} {RNA1509_12522, RNA815_11245} | |
| 5. | MligTC455_33504 | 1496 | 31.16 | Mlig455_021195 | Neo: - Age: logFC(26M/2M)=0.203 |
XAB2 | 1.684 | - | 0.732 | - | 0.952 | - | - | Mlig455_021195 {REF} {Length: 3351} {TRANSSPLICED} {Pfam: Ribosomal protein S19e [PF01090.21, score=160.6]; Tetratricopeptide repeat [PF13428.8, score=57.8]; Suppressor of forked protein (Suf) [PF05843.16, score=39.3]; Tetratricopeptide repeat [PF14559.8, score=38.4]; Tetratricopeptide repeat [PF13429.8, score=36.8]; Tetratricopeptide repeat [PF07719.19, score=31.9]; Tetratricopeptide repeat [PF13424.8, score=28.2]; NRDE-2, necessary for RNA interference [PF08424.12, score=24.4]; Mad3/BUB1 homology region 1 [PF08311.14, score=20.5]} {Human: ENSG00000076924, XAB2, XPA binding protein 2, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000019470, Xab2, XPA binding protein 2, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0033859, fand, fandango, [RH, Score=862, Expect=0.0]} {Celegans: WBGene00016837, syf-1, [RH, Score=755, Expect=0.0]} {Smed: dd_Smed_v6_6473_0_1, dd_Smed_v6_6473_0_1, [RH, Score=717, Expect=0.0]} {RNA1509_19732, RNA1509_5006} {RNA1310_2111.1, RNA1509_19732} {RNA1509_19732, RNA815_1651.1} |
| 6. | MligTC455_41955 | 474 | 9.88 | Mlig455_002789 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_002789 {REF} {Length: 1023} {TRANSSPLICED} {RNA1509_59252} {RNA1310_34863, RNA1509_59252} {RNA1509_59252, RNA815_16810} | |
| 7. | MligTC455_44829 | 435 | 9.07 | Mlig455_065380 | Neo: - Age: Down-Up-Up |
MED7 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_065380 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: MED7 protein [PF05983.13, score=117.3]} {Human: ENSG00000155868, MED7, mediator complex subunit 7, [RH, Score=129, Expect=4e-36]} {Mouse: ENSMUSG00000020397, Med7, mediator complex subunit 7, [RH, Score=129, Expect=5e-36]} {Dmel: FBgn0051390, MED7, Mediator complex subunit 7, [RH, Score=120, Expect=1e-32]} {Celegans: WBGene00002324, let-49, Mediator of RNA polymerase II transcription subunit 7, [RH, Score=82.8, Expect=2e-18]} {Smed: dd_Smed_v6_5572_0_1, dd_Smed_v6_5572_0_1, [RH, Score=146, Expect=3e-42]} {RNA1509_24534} {RNA1310_18518.1, RNA1509_24534} {RNA1509_24534, RNA815_16326} |
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