TomoSeq data search

Data search

Results for MligTC455_50124

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50124	3076	64.07	Mlig455_060177, Mlig455_067095	Neo: - Age: - Region-enriched R8: 1.168/0.01387 Regeneration-downregulated BL: -2.273 Regeneration-depleted BL: -2.273	CALM3	Mlig455_060177 {REF} {Length: 1071} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_35769} {RNA1310_33050, RNA1509_23148, RNA1509_35769} {RNA1509_23148, RNA1509_35769, RNA815_15287} Mlig455_067095 {REF} {Length: 1046} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_26519} {RNA1310_33050, RNA1509_26519} {RNA1509_26519, RNA815_15287}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50124

3076

64.07

Mlig455_060177, Mlig455_067095

Neo: -

Age: -

Region-enriched R8: 1.168/0.01387

Regeneration-downregulated BL: -2.273

Regeneration-depleted BL: -2.273

CALM3

Mlig455_060177 {REF} {Length: 1071} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_35769} {RNA1310_33050, RNA1509_23148, RNA1509_35769} {RNA1509_23148, RNA1509_35769, RNA815_15287}

Mlig455_067095 {REF} {Length: 1046} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_26519} {RNA1310_33050, RNA1509_26519} {RNA1509_26519, RNA815_15287}

Cumulative graph for MligTC455_50124

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.576	6.12	0.01724	0.36694
RegionR2	0.454	6.12	0.15266	0.48842
RegionR3	0.404	6.12	0.13427	0.62757
RegionR4	-0.217	6.12	0.53168	0.85558
RegionR5	-0.972	6.12	0.00105	0.01060
RegionR6	-0.191	6.12	0.50711	1.00000
RegionR7	0.93	6.12	0.00086	0.03135
RegionR8	1.168	6.12	0.00019	0.01387

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.457	6.12	0.22444	0.95604
RegenerationR2	-0.915	6.12	0.00461	0.10518
RegenerationR3	-0.233	6.12	0.48456	0.85270
RegenerationR4	-0.513	6.12	0.15362	0.58375
RegenerationR5	-0.439	6.12	0.20786	0.64123
RegenerationR6	-1.024	6.12	0.00452	0.08093
RegenerationBL	-2.273	6.12	0.00000	0.00000	Specific for BL: -2.273
RegenerationTP	-0.528	6.12	0.11200	0.51455

Genes with expression patterns similar to MligTC455_50124

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50124	3076	64.07	Mlig455_060177, Mlig455_067095	Neo: - Age: - Region-enriched R8: 1.168/0.01387 Regeneration-downregulated BL: -2.273 Regeneration-depleted BL: -2.273	CALM3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060177 {REF} {Length: 1071} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_35769} {RNA1310_33050, RNA1509_23148, RNA1509_35769} {RNA1509_23148, RNA1509_35769, RNA815_15287} Mlig455_067095 {REF} {Length: 1046} {Pfam: EF hand [PF00036.34, score=107.6]; EF-hand domain [PF13405.8, score=91.6]; EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF13202.8, score=82.3]; EF-hand domain pair [PF13833.8, score=73.8]; EF-hand domain [PF14658.8, score=33.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=122, Expect=3e-35]; ENSG00000198668, CALM1, calmodulin 1, [Score=122, Expect=3e-35]; ENSG00000178363, CALML3, calmodulin like 3, [Score=122, Expect=2e-35]; ENSG00000143933, CALM2, calmodulin 2, [Score=122, Expect=3e-35]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=122, Expect=2e-35]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=122, Expect=2e-35]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=122, Expect=2e-35]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=120, Expect=9e-35]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=124, Expect=4e-36]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=124, Expect=3e-36]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=124, Expect=3e-36]} {RNA1509_23148, RNA1509_26519} {RNA1310_33050, RNA1509_26519} {RNA1509_26519, RNA815_15287}
2.	MligTC455_47254	846	17.62	Mlig455_043914	Neo: - Age: - Region-enriched R8: 1.811/0.01369 Region-enriched R3: 1.619/0.00001 Region-enriched R7: 1.458/0.01469		2.732	-	-	0.911	-	0.953	0.868	Mlig455_043914 {REF} {Length: 2393} {Pfam: Fibronectin type II domain [PF00040.21, score=49.6]} {Dmel: FBgn0013733, shot, short stop, [Score=48.5, Expect=7e-06]} {RNA1509_15863, RNA1509_55479} {RNA1310_23604.1, RNA1509_15863, RNA1509_55479} {RNA1509_15863, RNA1509_55479, RNA815_10284}
3.	MligTC455_04421	629	13.1	Mlig455_008660, Mlig455_008671	Neo: - Age: - Region-enriched R8: 2.627/0.01190 Region-enriched R7: 2.553/0.00144 Region-enriched R3: 2.011/0.01226		2.505	-	-	-	0.950	0.844	0.711	Mlig455_008660 {REF} {Length: 2329} {Pfam: Major Facilitator Superfamily [PF07690.18, score=85.4]; MFS/sugar transport protein [PF13347.8, score=44.4]; MFS_1 like family [PF12832.9, score=35.8]; PUCC protein [PF03209.17, score=34.8]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=471, Expect=4e-162]} {RNA1509_18256} {RNA1310_12968} {RNA815_5192} Mlig455_008671 {REF} {Length: 2325} {Pfam: Major Facilitator Superfamily [PF07690.18, score=83.3]; MFS/sugar transport protein [PF13347.8, score=44.8]; MFS_1 like family [PF12832.9, score=35.3]; PUCC protein [PF03209.17, score=34.7]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=468, Expect=1e-160]} {RNA1509_18256} {RNA1310_12968, RNA1509_18256} {RNA1509_18256, RNA815_5192}
4.	MligTC455_25181	2947	61.4	Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883	Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511		1.708	-	-	-	0.960	-	0.748	Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223}
5.	MligTC455_16943	3243	67.57	Mlig455_015939, Mlig455_059704	Neo: - Age: logFC(26M/2M)=-0.433 Region-enriched R7: 1.287/0.00682 Region-enriched R6: 1.072/0.03826 Regeneration-downregulated BL: -2.106 Regeneration-depleted BL: -2.106		0.953	-	-	-	0.953	-	-	Mlig455_015939 {REF} {Length: 1575} {RNA1509_17366} {RNA1310_24251} {RNA815_10435} Mlig455_059704 {REF} {Length: 2179} {RNA1509_17366} {RNA1310_24251, RNA1509_17366} {RNA1509_17366, RNA815_10435}
6.	MligTC455_27270	533	11.1	Mlig455_009365	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_009365 {REF} {Length: 4198} {RNA1509_2150} {RNA1310_25787.1} {RNA815_1043.1}