M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_50187

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50187 2820 58.75 Mlig455_035036, Mlig455_035044, Mlig455_053431

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.537/0.02142

Mlig455_035036 {REF} {Length: 1305} {RNA1509_11407} {RNA1310_23918.1} {RNA815_10516}

Mlig455_035044 {REF} {Length: 1542} {RNA1509_11407, RNA1509_31858} {RNA1310_23918.1, RNA1509_11407, RNA1509_31858} {RNA1509_11407, RNA1509_31858, RNA815_10516}

Mlig455_053431 {REF} {Length: 1057} {RNA1509_22090} {RNA1310_23918.1, RNA1509_22090} {RNA1509_22090, RNA815_10516}

Cumulative graph for MligTC455_50187

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.061 5.906 0.20656 0.84592
RegionR2 1.537 5.906 0.00097 0.02142
RegionR3 -0.154 5.906 0.73072 1.00000
RegionR4 -0.167 5.906 0.75726 1.00000
RegionR5 -0.522 5.906 0.25357 0.57100
RegionR6 -0.345 5.906 0.44495 1.00000
RegionR7 0.353 5.906 0.42933 1.00000
RegionR8 0.359 5.906 0.44973 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.805 5.906 0.43460 1.00000
RegenerationR2 -1.443 5.906 0.00957 0.15668
RegenerationR3 -0.421 5.906 0.44438 0.82973
RegenerationR4 -0.379 5.906 0.51010 0.87435
RegenerationR5 -1.028 5.906 0.07268 0.42304
RegenerationR6 -0.622 5.906 0.28436 0.63444
RegenerationBL -1.444 5.906 0.01037 0.10297
RegenerationTP 0.16 5.906 0.76402 1.00000


Genes with expression patterns similar to MligTC455_50187

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50187 2820 58.75 Mlig455_035036, Mlig455_035044, Mlig455_053431

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.537/0.02142

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_035036 {REF} {Length: 1305} {RNA1509_11407} {RNA1310_23918.1} {RNA815_10516}

Mlig455_035044 {REF} {Length: 1542} {RNA1509_11407, RNA1509_31858} {RNA1310_23918.1, RNA1509_11407, RNA1509_31858} {RNA1509_11407, RNA1509_31858, RNA815_10516}

Mlig455_053431 {REF} {Length: 1057} {RNA1509_22090} {RNA1310_23918.1, RNA1509_22090} {RNA1509_22090, RNA815_10516}
2. MligTC455_47259 985 20.52 Mlig455_024978

Neo: -

Age: -

Region-enriched R2: 2.522/0.00122

 3.441 - 0.932 0.816 - 0.956 0.737 Mlig455_024978 {REF} {Length: 514} {RNA1310_63739.2} {RNA815_33907}
3. MligTC455_18122 1083 22.57 Mlig455_020157

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.614

Region-specific R2: 4.994

Region-enriched R2: 4.087/0.00011

 3.433 - 0.755 0.936 0.951 0.791 - Mlig455_020157 {REF} {Length: 2290} {RNA1310_56029} {RNA815_34539}
4. MligTC455_20016 607 12.65 Mlig455_041914

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.404

Region-enriched R2: 5.008/0.00002
Region-enriched R3: 2.421/0.04507

 3.384 - 0.739 0.960 - 0.957 0.728 Mlig455_041914 {REF} {Length: 745} {Pfam: EF-hand domain [PF13405.8, score=60.3]; EF hand [PF00036.34, score=52.6]; EF-hand domain pair [PF13499.8, score=49.5]; EF hand [PF13202.8, score=40.2]; EF-hand domain [PF14658.8, score=30.6]; EF-hand domain pair [PF13833.8, score=30.2]} {Dmel: FBgn0052103, CG32103, [Score=43.5, Expect=1e-05]} {Smed: dd_Smed_v6_16347_0_2, dd_Smed_v6_16347_0_2, [Score=67.8, Expect=1e-15]} {RNA1509_17125, RNA1509_40839} {RNA1310_56976, RNA1509_40839} {RNA1509_40839, RNA815_29327}
5. MligTC455_25703 225 4.7 Mlig455_017402, Mlig455_030916

Neo: -

Age: -

 3.353 0.759 0.797 0.832 - 0.965 -

Mlig455_017402 {REF} {Length: 899} {RNA1310_52753} {RNA815_26527}

Mlig455_030916 {REF} {Length: 700} {RNA1310_52753} {RNA815_26527}
6. MligTC455_11473 248 5.17 Mlig455_009711, Mlig455_071036

Neo: -

Age: Down-Up-Down

 CHRNA3 3.3 - 0.763 0.776 0.959 0.802 -

Mlig455_009711 {REF} {Length: 2402} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=241.4]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=222.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=391, Expect=2e-130]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=379, Expect=6e-126]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=375, Expect=2e-124]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=390, Expect=2e-130]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=375, Expect=2e-124]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [RH, Score=499, Expect=9e-173]} {Celegans: WBGene00000043, acr-3, Acetylcholine receptor subunit beta-type acr-3, [RH, Score=426, Expect=6e-145]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=510, Expect=1e-176]} {RNA1509_48201} {RNA1310_10118} {RNA815_29940}

Mlig455_071036 {REF} {Length: 746} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=28.1]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [Score=63.5, Expect=2e-13]} {Celegans: WBGene00000042, acr-2, Acetylcholine receptor subunit beta-type acr-2, [Score=63.9, Expect=9e-14]} {Smed: dd_Smed_v6_12535_0_1, dd_Smed_v6_12535_0_1, [Score=64.3, Expect=6e-14]} {RNA1310_21182} {RNA815_29940}
7. MligTC455_46669 2174 45.3 Mlig455_010563

Neo: -

Age: -

Region-enriched R7: 2.715/0.00000
Region-enriched R2: 1.903/0.02370

Regeneration-downregulated BL: -4.462

Regeneration-depleted BL: -4.462

 3.09 - 0.708 - 0.715 0.964 0.703 Mlig455_010563 {REF} {Length: 1146} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3105) [PF11303.10, score=111.6]} {Dmel: FBgn0035372, CG12093, [RH, Score=120, Expect=9e-32]} {Celegans: WBGene00012755, Y41C4A.8, [RH, Score=154, Expect=6e-46]} {RNA1509_12854, RNA1509_15128, RNA1509_35297} {RNA1310_20233, RNA1509_12854, RNA1509_15128, RNA1509_35297} {RNA1509_12854, RNA1509_15128, RNA1509_35297, RNA815_9751}
8. MligTC455_46339 7256 151.17 Mlig455_009786, Mlig455_010384

Neo: -

Age: -

Region-enriched R2: 1.545/0.00135
Region-enriched R7: 1.288/0.00228

Regeneration-downregulated BL: -1.841

Regeneration-depleted BL: -1.841

 2.64 - - 0.828 0.962 0.850 -

Mlig455_009786 {REF} {Length: 611} {Pfam: Pancreatic hormone peptide [PF00159.20, score=38.5]} {RNA1509_49591} {RNA1310_59752} {RNA815_30325}

Mlig455_010384 {REF} {Length: 611} {Pfam: Pancreatic hormone peptide [PF00159.20, score=38.5]} {RNA1509_49591} {RNA1310_59752} {RNA815_30325}
9. MligTC455_25922 42 0.88 Mlig455_006651

Neo: -

Age: -

 2.598 - 0.764 0.868 - 0.966 - Mlig455_006651 {REF} {Length: 1526} {RNA1509_12380} {RNA1310_42539} {RNA815_19957}
10. MligTC455_50347 549 11.43 Mlig455_012382

Neo: -

Age: Down-Up-Up

Region-specific R2: 6.390

Region-enriched R2: 6.623/0.00000

 2.559 0.828 - - 0.958 0.773 - Mlig455_012382 {REF} {Length: 797} {RNA1509_48155} {RNA1310_70969.2, RNA1509_48155} {RNA1509_48155, RNA815_39712}
11. MligTC455_33239 57 1.18 Mlig455_006962

Neo: -

Age: -

 CACNG5 2.556 0.787 - 0.805 - 0.964 - Mlig455_006962 {REF} {Length: 1957} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=72.5]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=60.2]} {Human: ENSG00000075429, CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5, [Score=91.3, Expect=5e-20]; ENSG00000105605, CACNG7, calcium voltage-gated channel auxiliary subunit gamma 7, [Score=89.0, Expect=4e-19]} {Mouse: ENSMUSG00000040373, Cacng5, calcium channel, voltage-dependent, gamma subunit 5, [Score=90.1, Expect=9e-20]; ENSMUSG00000069806, Cacng7, calcium channel, voltage-dependent, gamma subunit 7, [Score=89.0, Expect=3e-19]; ENSMUSG00000096998, Cacng7, calcium channel, voltage-dependent, gamma subunit 7, [Score=89.0, Expect=3e-19]} {Dmel: FBgn0064123, stg1, stargazin-like protein, [Score=62.0, Expect=6e-10]} {Smed: dd_Smed_v6_20066_0_1, dd_Smed_v6_20066_0_1, [RH, Score=228, Expect=2e-68]} {RNA1310_39723} {RNA815_37605}
12. MligTC455_20017 520 10.83 Mlig455_041990

Neo: -

Age: Down-Up-Up

Region-enriched R2: 4.348/0.00021

 2.526 - 0.780 0.779 - 0.967 - Mlig455_041990 {REF} {Length: 965} {Pfam: EF-hand domain [PF13405.8, score=60.3]; EF hand [PF00036.34, score=52.6]; EF-hand domain pair [PF13499.8, score=49.5]; EF hand [PF13202.8, score=40.2]; EF-hand domain [PF14658.8, score=30.6]; EF-hand domain pair [PF13833.8, score=30.2]} {Dmel: FBgn0052103, CG32103, [Score=43.5, Expect=1e-05]} {Smed: dd_Smed_v6_16347_0_2, dd_Smed_v6_16347_0_2, [Score=67.8, Expect=1e-15]} {RNA1509_17125, RNA1509_31091} {RNA1310_56976, RNA1509_17125, RNA1509_31091} {RNA1509_17125, RNA1509_31091, RNA815_29327}
13. MligTC455_44391 2139 44.56 Mlig455_034381, Mlig455_043867

Neo: -

Age: logFC(26M/2M)=1.551

Region-specific R2: 4.290

Region-enriched R2: 4.082/0.00000
Region-enriched R3: 2.984/0.00000

 2.381 - - 0.704 0.960 0.717 -

Mlig455_034381 {REF} {Length: 1311} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=67.8, Expect=7e-14]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=1e-05]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}

Mlig455_043867 {REF} {Length: 1251} {Pfam: Anemonia sulcata toxin III family [PF08098.13, score=19.1]} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=67.4, Expect=5e-14]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=1e-05]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}
14. MligTC455_44390 1061 22.1 Mlig455_034325

Neo: -

Age: -

Region-specific R2: 4.305

Region-enriched R2: 4.226/0.00000
Region-enriched R3: 3.109/0.00000

 2.377 - - 0.703 0.958 0.716 - Mlig455_034325 {REF} {Length: 1082} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=65.1, Expect=2e-13]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=9e-06]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}
15. MligTC455_16606 108 2.26 Mlig455_034973, Mlig455_053711, Mlig455_060000

Neo: -

Age: -

Region-enriched R2: 5.697/0.00617

 GLRA2 1.826 - - 0.871 - 0.955 -

Mlig455_034973 {REF} {Length: 1000} {RNA1310_100434}

Mlig455_053711 {REF} {Length: 2327} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=52.0]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=60.8, Expect=3e-09]; ENSG00000109738, GLRB, glycine receptor beta, [Score=60.1, Expect=5e-09]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=61.6, Expect=1e-09]; ENSMUSG00000028020, Glrb, glycine receptor, beta subunit, [Score=61.2, Expect=2e-09]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0010240, Lcch3, Ligand-gated chloride channel homolog 3, [Score=58.9, Expect=6e-09]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [Score=60.8, Expect=1e-09]} {RNA1310_56609} {RNA815_37711}

Mlig455_060000 {REF} {Length: 2781} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=52.0]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=62.0, Expect=1e-09]; ENSG00000109738, GLRB, glycine receptor beta, [Score=60.1, Expect=5e-09]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=62.0, Expect=7e-10]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=62.0, Expect=7e-10]; ENSMUSG00000028020, Glrb, glycine receptor, beta subunit, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0010240, Lcch3, Ligand-gated chloride channel homolog 3, [Score=58.9, Expect=5e-09]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [Score=60.8, Expect=1e-09]} {RNA1509_50322} {RNA1310_56609} {RNA815_37711}
16. MligTC455_44034 75 1.56 Mlig455_056055, Mlig455_061595, Mlig455_061597, Mlig455_061985

Neo: -

Age: -

 1.823 - - 0.868 - 0.955 -

Mlig455_056055 {REF} {Length: 245} {NoTransDecoderORF} {RNA815_40216}

Mlig455_061595 {REF} {Length: 436} {NoTransDecoderORF} {RNA815_40216}

Mlig455_061597 {REF} {Length: 525} {NoTransDecoderORF} {RNA815_40216}

Mlig455_061985 {REF} {Length: 121} {NoTransDecoderORF} {RNA815_40216}
17. MligTC455_40779 191 3.98 Mlig455_000277, Mlig455_035731, Mlig455_058356

Neo: -

Age: -

Region-enriched R4: 3.665/0.04268

 1.791 - - 0.831 - 0.960 -

Mlig455_000277 {REF} {Length: 1048} {RNA1509_16458} {RNA1310_43664.1} {RNA815_23166}

Mlig455_035731 {REF} {Length: 1048} {RNA1509_16458} {RNA1310_43664.1} {RNA815_23166}

Mlig455_058356 {REF} {Length: 1050} {RNA1509_16458} {RNA1310_43664.1} {RNA815_23166}
18. MligTC455_23269 1700 35.41 Mlig455_058823

Neo: -

Age: -

Region-enriched R8: 1.965/0.00066

 SYT1 1.716 0.746 0.970 - - - - Mlig455_058823 {REF} {Length: 3328} {Pfam: C2 domain [PF00168.32, score=181.3]; CEP76 C2 domain [PF15627.8, score=21.0]; Phosphoinositide 3-kinase C2 [PF00792.26, score=20.4]} {Human: ENSG00000067715, SYT1, synaptotagmin 1, [RH, Score=436, Expect=4e-151]} {Mouse: ENSMUSG00000035864, Syt1, synaptotagmin I, [RH, Score=435, Expect=4e-151]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=496, Expect=1e-174]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=432, Expect=6e-150]} {Smed: dd_Smed_v6_6730_0_1, dd_Smed_v6_6730_0_1, [Score=542, Expect=0.0]} {RNA1509_10517, RNA1509_25740, RNA1509_36281, RNA1509_40080} {RNA1310_21689, RNA1509_10517, RNA1509_25740, RNA1509_36281, RNA1509_40080} {RNA1509_10517, RNA1509_25740, RNA1509_36281, RNA1509_40080, RNA815_10622.1}
19. MligTC455_27683 1046 21.8 Mlig455_027300

Neo: -

Age: Down-Up-Down

Regeneration-downregulated R2: -3.093

Regeneration-depleted R2: -3.093

 1.716 - - 0.958 0.758 - - Mlig455_027300 {REF} {Length: 786} {RNA1509_20033} {RNA1310_17576.1} {RNA815_6182.1}
20. MligTC455_45881 285 5.94 Mlig455_051535

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 4.287/0.00883

 CALM2 1.699 - - 0.950 - 0.749 - Mlig455_051535 {REF} {Length: 1911} {Pfam: EF-hand domain pair [PF13499.8, score=44.7]; EF-hand domain [PF14658.8, score=28.5]; EF-hand domain [PF13405.8, score=18.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=83.2, Expect=5e-18]; ENSG00000198668, CALM1, calmodulin 1, [Score=83.2, Expect=1e-18]; ENSG00000160014, CALM3, calmodulin 3, [Score=82.8, Expect=2e-18]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=82.8, Expect=1e-18]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=82.8, Expect=1e-18]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=82.8, Expect=1e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=82.4, Expect=2e-18]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.4, Expect=1e-18]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_41430} {RNA1310_57772} {RNA815_28870}
21. MligTC455_10177 62 1.29 Mlig455_006973

Neo: -

Age: -

Region-enriched R7: 6.620/0.00005

 GRM3 0.961 - - - - 0.961 - Mlig455_006973 {REF} {Length: 3327} {Pfam: Receptor family ligand binding region [PF01094.30, score=224.9]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=186.3]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=39.1]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [RH, Score=670, Expect=0.0]; ENSMUSG00000023192, Grm2, glutamate receptor, metabotropic 2, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=719, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [RH, Score=623, Expect=0.0]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [RH, Score=803, Expect=0.0]} {RNA1310_41220}
22. MligTC455_40142 75 1.57 Mlig455_022108

Neo: -

Age: -

 RAB37 0.961 - - - - 0.961 - Mlig455_022108 {REF} {Length: 1460} {Pfam: Ras family [PF00071.24, score=174.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=101.6]; ADP-ribosylation factor family [PF00025.23, score=48.9]; 50S ribosome-binding GTPase [PF01926.25, score=23.6]} {Human: ENSG00000172794, RAB37, RAB37, member RAS oncogene family, [RH, Score=204, Expect=8e-66]; ENSG00000167964, RAB26, RAB26, member RAS oncogene family, [RH, Score=197, Expect=7e-62]} {Mouse: ENSMUSG00000020732, Rab37, RAB37, member RAS oncogene family, [RH, Score=202, Expect=2e-64]; ENSMUSG00000079657, Rab26, RAB26, member RAS oncogene family, [RH, Score=197, Expect=4e-62]} {Dmel: FBgn0086913, Rab26, [Score=187, Expect=7e-57]} {Celegans: WBGene00004285, rab-37, RAB family, [Score=166, Expect=1e-50]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=169, Expect=4e-52]} {RNA1310_81029} {RNA815_42257}
23. MligTC455_37010 127 2.64 Mlig455_012355

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.232/0.00085

 0.96 - - - - 0.960 - Mlig455_012355 {REF} {Length: 7737} {Pfam: HGWP repeat [PF03578.17, score=19.0]} {RNA1509_28298} {RNA1310_3268} {RNA815_628}
24. MligTC455_50214 8 0.18 Mlig455_029575

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_029575 {REF} {Length: 1377} {Pfam: Glycine rich protein [PF12810.9, score=27.5]} {RNA1310_134737} {RNA815_57224}
25. MligTC455_53741 27 0.57 Mlig455_014136

Neo: -

Age: -

 POMGNT1 0.959 - - - - 0.959 - Mlig455_014136 {REF} {Length: 2328} {Pfam: GNT-I family [PF03071.17, score=64.4]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [RH, Score=212, Expect=3e-59]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [RH, Score=211, Expect=2e-59]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=65.5, Expect=6e-11]} {Celegans: WBGene00001639, gly-14, GLYcosylation related; UDP-N-acetylglucosamine:a-3-D-mannoside b-1,2-N-acetylglucosaminyltransferase I, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_17617_0_1, dd_Smed_v6_17617_0_1, [RH, Score=179, Expect=1e-48]} {RNA1310_40753} {RNA815_46657}
26. MligTC455_52821 1046 21.79 Mlig455_006091

Neo: -

Age: -

 P4HA3 0.957 - - - 0.957 - - Mlig455_006091 {REF} {Length: 2559} {Pfam: Prolyl 4-Hydroxylase alpha-subunit, N-terminal region [PF08336.13, score=19.9]} {Human: ENSG00000149380, P4HA3, prolyl 4-hydroxylase subunit alpha 3, [Score=50.8, Expect=7e-06]} {Dmel: FBgn0039783, PH4alphaNE2, prolyl-4-hydroxylase-alpha NE2, [Score=59.3, Expect=7e-09]} {RNA1509_18750} {RNA1310_8314.1, RNA1509_18750} {RNA1509_18750, RNA815_2755}
27. MligTC455_53252 103 2.15 Mlig455_065173

Neo: -

Age: logFC(26M/2M)=0.345

Region-enriched R2: 3.909/0.00866

 SYT7 0.957 - - - - 0.957 - Mlig455_065173 {REF} {Length: 2245} {Pfam: C2 domain [PF00168.32, score=157.7]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [RH, Score=262, Expect=2e-80]} {Mouse: ENSMUSG00000024743, Syt7, synaptotagmin VII, [RH, Score=253, Expect=3e-78]} {Dmel: FBgn0039900, Syt7, Synaptotagmin 7, [Score=231, Expect=2e-73]} {Celegans: WBGene00004923, snt-3, SyNapTotagmin, [Score=180, Expect=8e-54]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=196, Expect=2e-58]} {RNA1509_49257} {RNA1310_13701, RNA1509_49257} {RNA1509_49257, RNA815_8339}
28. MligTC455_50423 77 1.61 Mlig455_006067

Neo: -

Age: -

 ANKRD50 0.956 - - - - 0.956 - Mlig455_006067 {REF} {Length: 3852} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.0]; Ankyrin repeats (many copies) [PF13637.8, score=67.2]; Mab-21 protein [PF03281.16, score=42.4]; Ankyrin repeat [PF13606.8, score=40.8]; Ankyrin repeats (many copies) [PF13857.8, score=37.3]; Ankyrin repeat [PF00023.32, score=32.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=87.4, Expect=7e-17]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=76.3, Expect=1e-13]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=82.4, Expect=9e-16]} {RNA1509_27730} {RNA1310_30361} {RNA815_2426.1}
29. MligTC455_42392 4370 91.04 Mlig455_009886, Mlig455_009972

Neo: -

Age: -

 ZAN 0.954 - - 0.954 - - -

Mlig455_009886 {REF} {Length: 906} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=65.1, Expect=6e-12]} {Dmel: FBgn0030999, Mur18B, Mucin related 18B, [Score=59.3, Expect=3e-10]} {RNA1509_59376, RNA1509_7238} {RNA1310_44088, RNA1509_59376} {RNA1509_59376, RNA815_30001}

Mlig455_009972 {REF} {Length: 1159} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=52.0, Expect=3e-07]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=76.6, Expect=9e-16]} {Dmel: FBgn0030999, Mur18B, Mucin related 18B, [Score=56.2, Expect=4e-09]} {RNA1509_7238} {RNA1310_44088} {RNA815_30001}
30. MligTC455_09225 57 1.19 Mlig455_044149, Mlig455_044161

Neo: -

Age: -

Region-enriched R8: 7.512/0.00030

 0.952 - - - - 0.952 -

Mlig455_044149 {REF} {Length: 959} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_11547} {RNA815_12549.1}

Mlig455_044161 {REF} {Length: 502} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_11547} {RNA815_12549.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA