TomoSeq data search

Data search

Results for MligTC455_50196

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50196	278	5.79	Mlig455_013801	Neo: - Age: -	WDR6	Mlig455_013801 {REF} {Length: 4791} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=46.2]} {Human: ENSG00000178252, WDR6, WD repeat domain 6, [RH, Score=69.7, Expect=2e-11]} {Mouse: ENSMUSG00000066357, Wdr6, WD repeat domain 6, [RH, Score=75.1, Expect=5e-13]} {Dmel: FBgn0053172, CG33172, [RH, Score=54.3, Expect=6e-07]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_10669_0_1, dd_Smed_v6_10669_0_1, [RH, Score=89.0, Expect=8e-18]} {RNA1509_24483, RNA1509_44733} {RNA1310_2296, RNA1509_24483, RNA1509_44733} {RNA1509_24483, RNA1509_44733, RNA815_3633}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50196

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.825	3.093	0.07210	0.59723
RegionR2	1.554	3.093	0.12342	0.43525
RegionR3	1.216	3.093	0.17153	0.69726
RegionR4	-0.534	3.093	0.95902	1.00000
RegionR5	0.686	3.093	0.45864	0.82083
RegionR6	0.972	3.093	0.30092	0.89183
RegionR7	1.814	3.093	0.04814	0.42158
RegionR8	1.118	3.093	0.37260	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.243	3.093	0.99996	1.00000
RegenerationR2	0.217	3.093	0.71969	0.96301
RegenerationR3	-0.038	3.093	0.95348	1.00000
RegenerationR4	1.104	3.093	0.11239	0.51414
RegenerationR5	0.162	3.093	0.80156	0.98891
RegenerationR6	0.556	3.093	0.40795	0.74252
RegenerationBL	-0.05	3.093	0.94850	1.00000
RegenerationTP	-0.876	3.093	0.34727	0.78903

Genes with expression patterns similar to MligTC455_50196

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50196	278	5.79	Mlig455_013801	Neo: - Age: -	WDR6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013801 {REF} {Length: 4791} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=46.2]} {Human: ENSG00000178252, WDR6, WD repeat domain 6, [RH, Score=69.7, Expect=2e-11]} {Mouse: ENSMUSG00000066357, Wdr6, WD repeat domain 6, [RH, Score=75.1, Expect=5e-13]} {Dmel: FBgn0053172, CG33172, [RH, Score=54.3, Expect=6e-07]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_10669_0_1, dd_Smed_v6_10669_0_1, [RH, Score=89.0, Expect=8e-18]} {RNA1509_24483, RNA1509_44733} {RNA1310_2296, RNA1509_24483, RNA1509_44733} {RNA1509_24483, RNA1509_44733, RNA815_3633}
2.	MligTC455_48806	291	6.07	Mlig455_026095, Mlig455_043131	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.405 Region-enriched R8: 3.032/0.00015	TCF4	0.966	-	-	-	0.966	-	-	Mlig455_026095 {REF} {Length: 3455} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=33.4]} {Human: ENSG00000196628, TCF4, transcription factor 4, [RH, Score=157, Expect=2e-40]; ENSG00000140262, TCF12, transcription factor 12, [RH, Score=156, Expect=1e-39]} {Mouse: ENSMUSG00000053477, Tcf4, transcription factor 4, [RH, Score=157, Expect=7e-41]; ENSMUSG00000032228, Tcf12, transcription factor 12, [RH, Score=156, Expect=1e-39]; ENSMUSG00000020167, Tcf3, transcription factor 3, [RH, Score=151, Expect=3e-38]} {Dmel: FBgn0267821, da, daughterless, [Score=148, Expect=5e-37]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [Score=97.8, Expect=1e-21]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=165, Expect=4e-43]} {RNA1310_14993.1} {RNA815_4995.1} Mlig455_043131 {REF} {Length: 3692} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.4]} {Human: ENSG00000196628, TCF4, transcription factor 4, [Score=139, Expect=3e-34]; ENSG00000140262, TCF12, transcription factor 12, [Score=134, Expect=4e-32]; ENSG00000071564, TCF3, transcription factor 3, [Score=133, Expect=5e-32]} {Mouse: ENSMUSG00000053477, Tcf4, transcription factor 4, [Score=139, Expect=1e-34]; ENSMUSG00000032228, Tcf12, transcription factor 12, [Score=134, Expect=2e-32]; ENSMUSG00000020167, Tcf3, transcription factor 3, [Score=134, Expect=1e-32]} {Dmel: FBgn0267821, da, daughterless, [Score=122, Expect=8e-29]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [Score=83.6, Expect=6e-17]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=140, Expect=1e-34]} {RNA1310_14993.1} {RNA815_4995.1}
3.	MligTC455_49175	947	19.74	Mlig455_027122	Neo: - Age: logFC(26M/2M)=-0.421		0.951	-	-	-	-	-	0.951	Mlig455_027122 {REF} {Length: 3132} {TRANSSPLICED} {Pfam: Fumarase C-terminus [PF05683.14, score=299.9]; Fumarate hydratase (Fumerase) [PF05681.16, score=291.7]} {Smed: dd_Smed_v6_2405_0_1, dd_Smed_v6_2405_0_1, [RH, Score=819, Expect=0.0]} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA1509_52616} {RNA1310_13870.1, RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA815_4615}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_50196

278

5.79

Mlig455_013801

Neo: -

Age: -

WDR6

1.000

MligTC455_48806

291

6.07

Mlig455_026095, Mlig455_043131

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.405

Region-enriched R8: 3.032/0.00015

TCF4

0.966

Mlig455_026095 {REF} {Length: 3455} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=33.4]} {Human: ENSG00000196628, TCF4, transcription factor 4, [RH, Score=157, Expect=2e-40]; ENSG00000140262, TCF12, transcription factor 12, [RH, Score=156, Expect=1e-39]} {Mouse: ENSMUSG00000053477, Tcf4, transcription factor 4, [RH, Score=157, Expect=7e-41]; ENSMUSG00000032228, Tcf12, transcription factor 12, [RH, Score=156, Expect=1e-39]; ENSMUSG00000020167, Tcf3, transcription factor 3, [RH, Score=151, Expect=3e-38]} {Dmel: FBgn0267821, da, daughterless, [Score=148, Expect=5e-37]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [Score=97.8, Expect=1e-21]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=165, Expect=4e-43]} {RNA1310_14993.1} {RNA815_4995.1}

Mlig455_043131 {REF} {Length: 3692} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.4]} {Human: ENSG00000196628, TCF4, transcription factor 4, [Score=139, Expect=3e-34]; ENSG00000140262, TCF12, transcription factor 12, [Score=134, Expect=4e-32]; ENSG00000071564, TCF3, transcription factor 3, [Score=133, Expect=5e-32]} {Mouse: ENSMUSG00000053477, Tcf4, transcription factor 4, [Score=139, Expect=1e-34]; ENSMUSG00000032228, Tcf12, transcription factor 12, [Score=134, Expect=2e-32]; ENSMUSG00000020167, Tcf3, transcription factor 3, [Score=134, Expect=1e-32]} {Dmel: FBgn0267821, da, daughterless, [Score=122, Expect=8e-29]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [Score=83.6, Expect=6e-17]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=140, Expect=1e-34]} {RNA1310_14993.1} {RNA815_4995.1}

MligTC455_49175

947

19.74

Mlig455_027122

Neo: -

Age: logFC(26M/2M)=-0.421

0.951

Mlig455_027122 {REF} {Length: 3132} {TRANSSPLICED} {Pfam: Fumarase C-terminus [PF05683.14, score=299.9]; Fumarate hydratase (Fumerase) [PF05681.16, score=291.7]} {Smed: dd_Smed_v6_2405_0_1, dd_Smed_v6_2405_0_1, [RH, Score=819, Expect=0.0]} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA1509_52616} {RNA1310_13870.1, RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307} {RNA1509_30796, RNA1509_31438, RNA1509_31510, RNA1509_42307, RNA815_4615}