Data search
Results for MligTC455_50352
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50352 | 611 | 12.73 | Mlig455_042633 | Neo: - Age: Up-Down-Up |
RETSAT | Mlig455_042633 {REF} {Length: 2709} {TRANSSPLICED} {Pfam: NAD(P)-binding Rossmann-like domain [PF13450.8, score=59.5]; Flavin containing amine oxidoreductase [PF01593.26, score=45.8]; FAD binding domain [PF00890.26, score=30.5]; FAD dependent oxidoreductase [PF12831.9, score=24.7]; FAD dependent oxidoreductase [PF01266.26, score=22.2]; GMC oxidoreductase [PF00732.21, score=22.0]; Thi4 family [PF01946.19, score=18.4]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=17.9]} {Human: ENSG00000042445, RETSAT, retinol saturase, [RH, Score=383, Expect=2e-124]} {Mouse: ENSMUSG00000056666, Retsat, retinol saturase (all trans retinol 13,14 reductase), [RH, Score=414, Expect=1e-136]} {RNA1509_11186, RNA1509_39613} {RNA1310_6975.1, RNA1509_11186, RNA1509_39613} {RNA1509_11186, RNA1509_39613, RNA815_3383.1} |
Cumulative graph for MligTC455_50352
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.504 | 3.985 | 0.21447 | 0.85511 | |
| RegionR2 | 0.556 | 3.985 | 0.23117 | 0.60365 | |
| RegionR3 | 0.587 | 3.985 | 0.08540 | 0.51697 | |
| RegionR4 | -0.101 | 3.985 | 0.80418 | 1.00000 | |
| RegionR5 | 0.773 | 3.985 | 0.00857 | 0.05162 | |
| RegionR6 | -0.108 | 3.985 | 0.78550 | 1.00000 | |
| RegionR7 | -0.039 | 3.985 | 0.94465 | 1.00000 | |
| RegionR8 | -0.164 | 3.985 | 0.81495 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.212 | 3.985 | 0.18259 | 0.92312 | |
| RegenerationR2 | 0.068 | 3.985 | 0.85692 | 1.00000 | |
| RegenerationR3 | 0.758 | 3.985 | 0.03696 | 0.34004 | |
| RegenerationR4 | 0.949 | 3.985 | 0.01057 | 0.15609 | |
| RegenerationR5 | 0.706 | 3.985 | 0.02022 | 0.24617 | |
| RegenerationR6 | 1.251 | 3.985 | 0.00194 | 0.05009 | |
| RegenerationBL | 1.42 | 3.985 | 0.00521 | 0.06751 | |
| RegenerationTP | 1.156 | 3.985 | 0.03908 | 0.32974 |
Genes with expression patterns similar to MligTC455_50352
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50352 | 611 | 12.73 | Mlig455_042633 | Neo: - Age: Up-Down-Up |
RETSAT | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042633 {REF} {Length: 2709} {TRANSSPLICED} {Pfam: NAD(P)-binding Rossmann-like domain [PF13450.8, score=59.5]; Flavin containing amine oxidoreductase [PF01593.26, score=45.8]; FAD binding domain [PF00890.26, score=30.5]; FAD dependent oxidoreductase [PF12831.9, score=24.7]; FAD dependent oxidoreductase [PF01266.26, score=22.2]; GMC oxidoreductase [PF00732.21, score=22.0]; Thi4 family [PF01946.19, score=18.4]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=17.9]} {Human: ENSG00000042445, RETSAT, retinol saturase, [RH, Score=383, Expect=2e-124]} {Mouse: ENSMUSG00000056666, Retsat, retinol saturase (all trans retinol 13,14 reductase), [RH, Score=414, Expect=1e-136]} {RNA1509_11186, RNA1509_39613} {RNA1310_6975.1, RNA1509_11186, RNA1509_39613} {RNA1509_11186, RNA1509_39613, RNA815_3383.1} |
| 2. | MligTC455_17060 | 450 | 9.38 | Mlig455_064855 | Neo: - Age: - Region-enriched R5: 1.550/0.00019 |
PMPCA | 1.689 | - | 0.952 | - | - | - | 0.737 | Mlig455_064855 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: Peptidase M16 inactive domain [PF05193.23, score=107.8]; Insulinase (Peptidase family M16) [PF00675.22, score=83.5]} {Human: ENSG00000165688, PMPCA, peptidase, mitochondrial processing alpha subunit, [RH, Score=362, Expect=6e-119]} {Mouse: ENSMUSG00000026926, Pmpca, peptidase (mitochondrial processing) alpha, [RH, Score=361, Expect=1e-118]} {Dmel: FBgn0033235, CG8728, [RH, Score=392, Expect=2e-130]} {Celegans: WBGene00022159, mppa-1, Mitochondrial Processing Peptidase Alpha, [RH, Score=292, Expect=2e-92]} {Smed: dd_Smed_v6_5226_0_1, dd_Smed_v6_5226_0_1, [RH, Score=359, Expect=3e-118]} {RNA1509_56845, RNA1509_6967} {RNA1310_13758, RNA1509_56845, RNA1509_6967} {RNA1509_56845, RNA1509_6967, RNA815_4721} |
| 3. | MligTC455_48203 | 546 | 11.37 | Mlig455_007660, Mlig455_020894 | Neo: - Age: - Region-enriched R5: 1.028/0.02363 |
SNX4 | 1.674 | - | - | 0.713 | 0.961 | - | - | Mlig455_007660 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=50.6]} {Human: ENSG00000114520, SNX4, sorting nexin 4, [RH, Score=174, Expect=4e-49]} {Mouse: ENSMUSG00000022808, Snx4, sorting nexin 4, [RH, Score=179, Expect=2e-51]} {Dmel: FBgn0038065, Snx3, Sorting nexin 3, [Score=48.5, Expect=1e-06]} {Celegans: WBGene00006503, snx-3, Sorting NeXin, [Score=47.0, Expect=3e-06]} {Smed: dd_Smed_v6_5267_0_1, dd_Smed_v6_5267_0_1, [Score=50.1, Expect=1e-06]} {RNA1509_20611} {RNA1310_17017, RNA1509_20611} {RNA1509_20611, RNA815_6645} Mlig455_020894 {REF} {Length: 2298} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=50.6]} {Human: ENSG00000114520, SNX4, sorting nexin 4, [RH, Score=175, Expect=2e-49]} {Mouse: ENSMUSG00000022808, Snx4, sorting nexin 4, [RH, Score=181, Expect=6e-52]} {Dmel: FBgn0038065, Snx3, Sorting nexin 3, [Score=48.5, Expect=2e-06]} {Celegans: WBGene00006503, snx-3, Sorting NeXin, [Score=47.0, Expect=3e-06]} {Smed: dd_Smed_v6_5267_0_1, dd_Smed_v6_5267_0_1, [Score=50.1, Expect=1e-06]} {RNA1509_52971} {RNA1310_17017, RNA1509_52971} {RNA1509_52971, RNA815_6645} |
| 4. | MligTC455_07531 | 381 | 7.95 | Mlig455_058950 | Neo: - Age: Down-Up-Down |
TSEN34 | 0.96 | - | 0.960 | - | - | - | - | Mlig455_058950 {REF} {Length: 2609} {Pfam: tRNA intron endonuclease, catalytic C-terminal domain [PF01974.19, score=47.1]} {Human: ENSG00000278605, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278622, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000170892, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000273896, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274796, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274129, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274672, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278712, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274078, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000275165, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]} {Mouse: ENSMUSG00000035585, Tsen34, tRNA splicing endonuclease subunit 34, [Score=70.1, Expect=3e-13]} {Dmel: FBgn0053260, CG33260, [RH, Score=67.8, Expect=9e-13]} {Smed: dd_Smed_v6_4610_1_4, dd_Smed_v6_4610_1_4, [Score=72.4, Expect=2e-14]} {RNA1509_35637} {RNA1310_8022.1, RNA1509_35637} {RNA1509_35637, RNA815_9502.1} |
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