Data search
Results for MligTC455_50371
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50371 | 560 | 11.67 | Mlig455_014288 | Neo: - Age: Up-Down-Up |
Mlig455_014288 {REF} {Length: 2754} {RNA1509_32477} {RNA1310_19886, RNA1509_32477} {RNA1509_32477, RNA815_6022} |
Cumulative graph for MligTC455_50371
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.853 | 3.807 | 0.54729 | 1.00000 | |
| RegionR2 | 0.256 | 3.807 | 0.63325 | 0.97334 | |
| RegionR3 | 0.278 | 3.807 | 0.53378 | 1.00000 | |
| RegionR4 | 0.615 | 3.807 | 0.25519 | 0.55597 | |
| RegionR5 | -0.062 | 3.807 | 0.89098 | 1.00000 | |
| RegionR6 | 0.251 | 3.807 | 0.58380 | 1.00000 | |
| RegionR7 | -0.787 | 3.807 | 0.25039 | 0.87690 | |
| RegionR8 | 0.302 | 3.807 | 0.66150 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.098 | 3.807 | 0.96062 | 1.00000 | |
| RegenerationR2 | 0.69 | 3.807 | 0.10638 | 0.51242 | |
| RegenerationR3 | 0.853 | 3.807 | 0.07889 | 0.46299 | |
| RegenerationR4 | 0.189 | 3.807 | 0.71114 | 0.95760 | |
| RegenerationR5 | -0.452 | 3.807 | 0.36192 | 0.77314 | |
| RegenerationR6 | -0.019 | 3.807 | 0.96838 | 1.00000 | |
| RegenerationBL | 1.463 | 3.807 | 0.00455 | 0.06182 | |
| RegenerationTP | 0.796 | 3.807 | 0.20314 | 0.64466 |
Genes with expression patterns similar to MligTC455_50371
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50371 | 560 | 11.67 | Mlig455_014288 | Neo: - Age: Up-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014288 {REF} {Length: 2754} {RNA1509_32477} {RNA1310_19886, RNA1509_32477} {RNA1509_32477, RNA815_6022} | |
| 2. | MligTC455_50372 | 912 | 19.01 | Mlig455_014343 | Neo: - |
4.593 | 0.967 | 0.977 | - | 0.892 | 0.864 | 0.893 | Mlig455_014343 {REF} {Length: 2796} {RNA1509_32477} {RNA1310_19886} {RNA815_6022} | |
| 3. | MligTC455_18348 | 399 | 8.3 | Mlig455_057138 | Neo: - Age: logFC(26M/2M)=-0.655 |
KCNA3 | 2.38 | - | - | 0.708 | - | 0.720 | 0.952 | Mlig455_057138 {REF} {Length: 2324} {Pfam: Ion transport protein [PF00520.33, score=161.8]; BTB/POZ domain [PF02214.24, score=97.8]; Ion channel [PF07885.18, score=49.9]} {Human: ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=613, Expect=0.0]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=612, Expect=0.0]; ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=607, Expect=0.0]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [RH, Score=590, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=610, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=607, Expect=0.0]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=630, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=377, Expect=3e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_21830} {RNA1310_8777} {RNA815_4701} |
| 4. | MligTC455_52575 | 4987 | 103.9 | Mlig455_010835 | Neo: - |
RPL6 | 1.783 | - | - | - | 0.826 | - | 0.957 | Mlig455_010835 {REF} {Length: 2408} {Pfam: Ribosomal protein L6e [PF01159.21, score=115.5]; EF hand [PF00036.34, score=44.6]; EF-hand domain pair [PF13499.8, score=43.7]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF13405.8, score=34.9]; EF-hand domain pair [PF13833.8, score=22.9]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=19.7]} {Human: ENSG00000089009, RPL6, ribosomal protein L6, [RH, Score=209, Expect=5e-65]} {Mouse: ENSMUSG00000029614, Rpl6, ribosomal protein L6, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [RH, Score=162, Expect=4e-48]} {Smed: dd_Smed_v6_205_0_1, dd_Smed_v6_205_0_1, [RH, Score=201, Expect=1e-63]} {RNA1509_2051} {RNA1310_25136.1, RNA1509_2051} {RNA1509_2051, RNA815_9531} |
| 5. | MligTC455_32265 | 915 | 19.06 | Mlig455_041418 | Neo: - Age: logFC(26M/2M)=-0.513 |
DCDC2 | 1.753 | - | - | 0.797 | - | 0.956 | - | Mlig455_041418 {REF} {Length: 2999} {Pfam: Doublecortin [PF03607.19, score=82.8]; IQ calmodulin-binding motif [PF00612.29, score=68.9]} {Human: ENSG00000146038, DCDC2, doublecortin domain containing 2, [RH, Score=105, Expect=2e-23]} {Mouse: ENSMUSG00000035910, Dcdc2a, doublecortin domain containing 2a, [RH, Score=111, Expect=2e-25]} {Dmel: FBgn0013467, igl, igloo, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_6464_0_1, dd_Smed_v6_6464_0_1, [Score=243, Expect=3e-70]} {RNA1509_53513, RNA1509_5661} {RNA1310_18305, RNA1509_53513} {RNA1509_53513, RNA815_9800.1} |
| 6. | MligTC455_27892 | 1176 | 24.51 | Mlig455_059337 | Neo: - Age: logFC(26M/2M)=-0.371 Regeneration-upregulated BL: 1.618 Regeneration-enriched BL: 1.618 |
0.968 | - | - | - | 0.968 | - | - | Mlig455_059337 {REF} {Length: 1631} {RNA1509_9554} {RNA1310_29242} {RNA815_13125} | |
| 7. | MligTC455_47965 | 1281 | 26.69 | Mlig455_064648 | Neo: - Age: logFC(26M/2M)=-0.679 Regeneration-upregulated BL: 1.370 Regeneration-enriched BL: 1.370 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_064648 {REF} {Length: 1446} {Pfam: ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=20.1]} {RNA1509_52369} {RNA1310_23553} {RNA815_9653} |
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