Data search
Results for MligTC455_50379
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50379 | 129 | 2.69 | Mlig455_006951, Mlig455_017968 | Neo: - Age: Up-Down-Up |
BEST1 | Mlig455_006951 {REF} {Length: 2477} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=260.4]} {Human: ENSG00000167995, BEST1, bestrophin 1, [RH, Score=353, Expect=2e-113]; ENSG00000127325, BEST3, bestrophin 3, [RH, Score=350, Expect=7e-115]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [RH, Score=345, Expect=8e-111]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=333, Expect=8e-104]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_8314_0_1, dd_Smed_v6_8314_0_1, [RH, Score=275, Expect=5e-86]} {RNA1509_5310} {RNA1310_39406} {RNA815_28331} Mlig455_017968 {REF} {Length: 2492} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=261.4]} {Human: ENSG00000167995, BEST1, bestrophin 1, [RH, Score=353, Expect=1e-113]; ENSG00000127325, BEST3, bestrophin 3, [RH, Score=352, Expect=2e-115]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [RH, Score=345, Expect=6e-111]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=333, Expect=3e-104]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=308, Expect=4e-96]} {Smed: dd_Smed_v6_8314_0_1, dd_Smed_v6_8314_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_5310} {RNA1310_39406} {RNA815_28331} |
Cumulative graph for MligTC455_50379
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.786 | 2.349 | 1.00000 | 1.00000 | |
| RegionR2 | 1.934 | 2.349 | 0.12972 | 0.44689 | |
| RegionR3 | 1.437 | 2.349 | 0.20953 | 0.75087 | |
| RegionR4 | 2.973 | 2.349 | 0.02466 | 0.11818 | |
| RegionR5 | 0.925 | 2.349 | 0.37198 | 0.72500 | |
| RegionR6 | 0.553 | 2.349 | 0.50806 | 1.00000 | |
| RegionR7 | -3.691 | 2.349 | 0.99975 | 1.00000 | |
| RegionR8 | -3.345 | 2.349 | 0.99973 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.496 | 2.349 | 0.99985 | 1.00000 | |
| RegenerationR2 | -0.38 | 2.349 | 0.55049 | 0.89366 | |
| RegenerationR3 | 0.663 | 2.349 | 0.42861 | 0.82040 | |
| RegenerationR4 | -0.556 | 2.349 | 0.51968 | 0.87894 | |
| RegenerationR5 | 0.568 | 2.349 | 0.48272 | 0.84768 | |
| RegenerationR6 | 0.517 | 2.349 | 0.56330 | 0.84759 | |
| RegenerationBL | 3.746 | 2.349 | 0.02405 | 0.17036 | |
| RegenerationTP | 5.147 | 2.349 | 0.01985 | 0.24157 |
Genes with expression patterns similar to MligTC455_50379
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50379 | 129 | 2.69 | Mlig455_006951, Mlig455_017968 | Neo: - Age: Up-Down-Up |
BEST1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006951 {REF} {Length: 2477} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=260.4]} {Human: ENSG00000167995, BEST1, bestrophin 1, [RH, Score=353, Expect=2e-113]; ENSG00000127325, BEST3, bestrophin 3, [RH, Score=350, Expect=7e-115]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [RH, Score=345, Expect=8e-111]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=333, Expect=8e-104]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_8314_0_1, dd_Smed_v6_8314_0_1, [RH, Score=275, Expect=5e-86]} {RNA1509_5310} {RNA1310_39406} {RNA815_28331} Mlig455_017968 {REF} {Length: 2492} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=261.4]} {Human: ENSG00000167995, BEST1, bestrophin 1, [RH, Score=353, Expect=1e-113]; ENSG00000127325, BEST3, bestrophin 3, [RH, Score=352, Expect=2e-115]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [RH, Score=345, Expect=6e-111]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=333, Expect=3e-104]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=308, Expect=4e-96]} {Smed: dd_Smed_v6_8314_0_1, dd_Smed_v6_8314_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_5310} {RNA1310_39406} {RNA815_28331} |
| 2. | MligTC455_40268 | 162 | 3.38 | Mlig455_030335 | Neo: - Age: Down-Up-Up |
PRKAR1B | 1.671 | 0.954 | 0.717 | - | - | - | - | Mlig455_030335 {REF} {Length: 2002} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=87.6]} {Human: ENSG00000188191, PRKAR1B, protein kinase cAMP-dependent type I regulatory subunit beta, [Score=50.8, Expect=2e-06]; ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=54.7, Expect=6e-08]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=110, Expect=5e-26]} {RNA1509_58940} {RNA1310_17699, RNA1509_58940} {RNA1509_58940, RNA815_19132} |
| 3. | MligTC455_13522 | 37 | 0.76 | Mlig455_053843 | Neo: - Age: - |
SBK1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_053843 {REF} {Length: 1643} {Pfam: Protein kinase domain [PF00069.27, score=136.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.2]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000188322, SBK1, SH3 domain binding kinase 1, [Score=247, Expect=8e-78]} {Mouse: ENSMUSG00000042978, Sbk1, SH3-binding kinase 1, [Score=247, Expect=5e-78]} {Dmel: FBgn0034137, CG4945, [RH, Score=204, Expect=2e-60]} {Celegans: WBGene00012792, Y43D4A.6, [Score=112, Expect=8e-28]} {Smed: dd_Smed_v6_5328_1_1, dd_Smed_v6_5328_1_1, [Score=101, Expect=1e-23]} {RNA1310_55113} |
| 4. | MligTC455_49870 | 86 | 1.8 | Mlig455_028362, Mlig455_067454, Mlig455_067455 | Neo: - Age: - |
CHRM1, CHRM4 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_028362 {REF} {Length: 3223} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=40.4]} {Human: ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=98.2, Expect=2e-21]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=94.7, Expect=3e-20]} {Mouse: ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=97.4, Expect=2e-21]; ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=94.7, Expect=2e-20]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=136, Expect=5e-34]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=128, Expect=4e-33]} {Smed: dd_Smed_v6_37337_0_1, dd_Smed_v6_37337_0_1, [RH, Score=149, Expect=1e-42]} {RNA1310_12338} {RNA815_37088} Mlig455_067454 {REF} {Length: 1188} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=103.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=27.2]} {Human: ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=102, Expect=2e-23]; ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=97.1, Expect=1e-21]} {Mouse: ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=103, Expect=6e-24]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=189, Expect=1e-53]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [Score=133, Expect=3e-34]} {Smed: dd_Smed_v6_24759_0_1, dd_Smed_v6_24759_0_1, [Score=225, Expect=7e-69]} {RNA1310_12338} {RNA815_52171} Mlig455_067455 {REF} {Length: 2697} {RNA1310_12338} {RNA815_37088} |
| 5. | MligTC455_39978 | 270 | 5.62 | Mlig455_052261, Mlig455_052349 | Neo: - Age: Down-Up-Up Region-enriched R8: 3.650/0.00368 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_052261 {REF} {Length: 760} {RNA1310_41850} {RNA815_20313} Mlig455_052349 {REF} {Length: 710} {RNA1310_41850} {RNA815_20313} |