M. lignano Tomo-Seq
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Results for MligTC455_50443

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50443 7977 166.19 Mlig455_038025

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.325

 ARF1 Mlig455_038025 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=263.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=52.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=52.3]; Ras family [PF00071.24, score=46.9]; G-protein alpha subunit [PF00503.22, score=44.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]} {Human: ENSG00000143761, ARF1, ADP ribosylation factor 1, [RH, Score=343, Expect=4e-122]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [RH, Score=336, Expect=2e-119]} {Mouse: ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [RH, Score=343, Expect=3e-122]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [RH, Score=338, Expect=2e-120]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [RH, Score=336, Expect=1e-119]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [RH, Score=347, Expect=3e-124]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [RH, Score=347, Expect=5e-124]} {Smed: dd_Smed_v6_203_0_1, dd_Smed_v6_203_0_1, [RH, Score=344, Expect=3e-123]} {RNA1509_859} {RNA1310_36598, RNA1509_859} {RNA1509_859, RNA815_11926}

Cumulative graph for MligTC455_50443

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.079 7.433 0.00000 0.00007
RegionR2 0.062 7.433 0.78001 1.00000
RegionR3 0.295 7.433 0.12012 0.59894
RegionR4 0.703 7.433 0.00097 0.01013
RegionR5 0.687 7.433 0.00012 0.00194
RegionR6 0.66 7.433 0.00044 0.02257
RegionR7 0.565 7.433 0.00668 0.13417
RegionR8 0.106 7.433 0.67552 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.37 7.433 0.06236 0.73556
RegenerationR2 0.266 7.433 0.18836 0.63166
RegenerationR3 0.09 7.433 0.67346 0.93818
RegenerationR4 -0.007 7.433 0.97329 1.00000
RegenerationR5 0.237 7.433 0.24409 0.67730
RegenerationR6 -0.158 7.433 0.45406 0.77348
RegenerationBL 0.473 7.433 0.01623 0.13499
RegenerationTP 0.399 7.433 0.06649 0.41549


Genes with expression patterns similar to MligTC455_50443

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50443 7977 166.19 Mlig455_038025

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.325

 ARF1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038025 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=263.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=52.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=52.3]; Ras family [PF00071.24, score=46.9]; G-protein alpha subunit [PF00503.22, score=44.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]} {Human: ENSG00000143761, ARF1, ADP ribosylation factor 1, [RH, Score=343, Expect=4e-122]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [RH, Score=336, Expect=2e-119]} {Mouse: ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [RH, Score=343, Expect=3e-122]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [RH, Score=338, Expect=2e-120]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [RH, Score=336, Expect=1e-119]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [RH, Score=347, Expect=3e-124]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [RH, Score=347, Expect=5e-124]} {Smed: dd_Smed_v6_203_0_1, dd_Smed_v6_203_0_1, [RH, Score=344, Expect=3e-123]} {RNA1509_859} {RNA1310_36598, RNA1509_859} {RNA1509_859, RNA815_11926}

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