M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_50486

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50486 45 0.93 Mlig455_043847

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.969/0.01632

 Mlig455_043847 {REF} {Length: 1818} {TRANSSPLICED} {RNA1310_26772.2} {RNA815_31349}

Cumulative graph for MligTC455_50486

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.526 1.138 0.22005 0.86370
RegionR2 -1.509 1.138 0.99773 1.00000
RegionR3 -0.602 1.138 0.98226 1.00000
RegionR4 2.746 1.138 0.03533 0.15240
RegionR5 2.969 1.138 0.00183 0.01632
RegionR6 -0.215 1.138 0.93677 1.00000
RegionR7 0.742 1.138 0.62353 1.00000
RegionR8 1.396 1.138 0.43560 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.137 1.138 0.99990 1.00000
RegenerationR2 1.123 1.138 0.24463 0.69234
RegenerationR3 -0.247 1.138 0.93952 1.00000
RegenerationR4 -2.605 1.138 0.02179 0.23482
RegenerationR5 -0.924 1.138 0.21994 0.65461
RegenerationR6 0.158 1.138 0.88423 1.00000
RegenerationBL -1.156 1.138 0.45544 0.82263
RegenerationTP -0.828 1.138 0.55653 0.93690


Genes with expression patterns similar to MligTC455_50486

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50486 45 0.93 Mlig455_043847

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.969/0.01632

 4 - - 1.000 1.000 1.000 1.000 Mlig455_043847 {REF} {Length: 1818} {TRANSSPLICED} {RNA1310_26772.2} {RNA815_31349}
2. MligTC455_52470 442 9.22 Mlig455_021832

Neo: Irradiation

Age: -

Region-enriched R8: 6.102/0.00000
Region-enriched R7: 3.407/0.00021

Regeneration-downregulated BL: -8.156

Regeneration-depleted BL: -8.156

 DRD3 1.852 - - 0.950 - - 0.902 Mlig455_021832 {REF} {Length: 2644} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=153.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=40.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=30.9]} {Human: ENSG00000151577, DRD3, dopamine receptor D3, [Score=78.2, Expect=5e-15]; ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=74.7, Expect=8e-14]} {Mouse: ENSMUSG00000029193, Cckar, cholecystokinin A receptor, [Score=73.2, Expect=2e-13]; ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [Score=72.4, Expect=3e-13]; ENSMUSG00000026432, Avpr1b, arginine vasopressin receptor 1B, [Score=72.4, Expect=3e-13]; ENSMUSG00000022705, Drd3, dopamine receptor D3, [Score=71.6, Expect=5e-13]; ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=71.6, Expect=4e-13]; ENSMUSG00000028172, Tacr3, tachykinin receptor 3, [Score=71.6, Expect=5e-13]} {Dmel: FBgn0038542, TyrR, Tyramine receptor, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=81.6, Expect=1e-16]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=72.0, Expect=2e-13]} {RNA1509_15350} {RNA1310_8194, RNA1509_15350} {RNA1509_15350, RNA815_11760.1}
3. MligTC455_43169 207 4.32 Mlig455_024672

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.842

 RNF41 1.831 - - - 0.965 0.866 - Mlig455_024672 {REF} {Length: 2536} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=33.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=27.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=25.5]; RING-H2 zinc finger domain [PF12678.9, score=24.6]; TRAF-type zinc finger [PF02176.20, score=24.1]; zinc-RING finger domain [PF14634.8, score=22.6]; Prokaryotic RING finger family 4 [PF14447.8, score=22.0]; Seven in absentia protein family [PF03145.18, score=21.2]; zf-RING of BARD1-type protein [PF14835.8, score=20.1]} {Human: ENSG00000181852, RNF41, ring finger protein 41, [Score=120, Expect=4e-33]} {Mouse: ENSMUSG00000025373, Rnf41, ring finger protein 41, [Score=120, Expect=3e-32]} {Dmel: FBgn0028847, CG9014, [Score=112, Expect=5e-29]} {Smed: dd_Smed_v6_5173_0_1, dd_Smed_v6_5173_0_1, [Score=110, Expect=1e-28]} {RNA1509_36641, RNA1509_42769} {RNA1310_9044.1, RNA1509_36641, RNA1509_42769} {RNA1509_36641, RNA1509_42769, RNA815_14046}
4. MligTC455_24382 88 1.84 Mlig455_010635

Neo: Irradiation

Age: Up-Down-Up

 ZNF652 1.728 - - 0.974 - - 0.754 Mlig455_010635 {REF} {Length: 1923} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=42.3]; C2H2-type zinc finger [PF13894.8, score=34.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.6]; Zinc-finger double domain [PF13465.8, score=26.2]; C2H2-type zinc finger [PF13912.8, score=22.7]; Zinc-finger of C2H2 type [PF12874.9, score=21.3]} {Human: ENSG00000198740, ZNF652, zinc finger protein 652, [Score=72.8, Expect=8e-14]; ENSG00000187792, ZNF70, zinc finger protein 70, [Score=70.9, Expect=4e-13]; ENSG00000114853, ZBTB47, zinc finger and BTB domain containing 47, [Score=70.1, Expect=1e-12]} {Mouse: ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=72.4, Expect=9e-14]; ENSMUSG00000013419, Zfp651, zinc finger protein 651, [Score=70.5, Expect=5e-13]; ENSMUSG00000059475, Zfp426, zinc finger protein 426, [Score=68.9, Expect=1e-12]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=68.9, Expect=2e-12]; ENSMUSG00000029127, Zbtb49, zinc finger and BTB domain containing 49, [Score=68.9, Expect=1e-12]} {Dmel: FBgn0033782, sug, sugarbabe, [Score=78.2, Expect=5e-16]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=65.9, Expect=4e-12]} {Smed: dd_Smed_v6_17566_0_1, dd_Smed_v6_17566_0_1, [Score=77.0, Expect=1e-15]} {RNA1509_30158, RNA1509_37341} {RNA1310_19294.1, RNA1509_30158} {RNA1509_30158, RNA815_13553}
5. MligTC455_50908 139 2.9 Mlig455_052218

Neo: -

Age: logFC(26M/2M)=-0.399

 1.707 - - 0.745 - 0.962 - Mlig455_052218 {REF} {Length: 3196} {TRANSSPLICED} {RNA1509_28633, RNA1509_55949} {RNA1310_25562, RNA1509_28633, RNA1509_55949} {RNA1509_28633, RNA1509_55949, RNA815_13856}
6. MligTC455_15221 133 2.76 Mlig455_035746

Neo: Irradiation

Age: logFC(26M/2M)=0.563

 MCTP2 1.668 - - 0.956 - - 0.712 Mlig455_035746 {REF} {Length: 2900} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=1e-73]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=239, Expect=7e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=230, Expect=3e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=192, Expect=3e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030, RNA1509_39731} {RNA1509_39731, RNA815_47476}
7. MligTC455_23461 58 1.2 Mlig455_008484

Neo: Irradiation

Age: -

Region-enriched R5: 5.337/0.02626

 HLF 1.668 - - 0.966 - 0.702 - Mlig455_008484 {REF} {Length: 2630} {Pfam: Basic region leucine zipper [PF07716.17, score=48.3]; bZIP transcription factor [PF00170.23, score=23.8]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034096, CG7786, [Score=95.5, Expect=3e-23]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=77.8, Expect=9e-17]} {Smed: dd_Smed_v6_14028_0_1, dd_Smed_v6_14028_0_1, [RH, Score=70.9, Expect=8e-15]} {RNA1509_55988} {RNA1310_15764.2, RNA1509_55988} {RNA1509_55988, RNA815_6404.1}
8. MligTC455_15437 17 0.36 Mlig455_035074

Neo: -

Age: -

 0.994 - - - - 0.994 - Mlig455_035074 {REF} {Length: 1138} {Pfam: PAN domain [PF00024.28, score=31.1]} {RNA1310_131470} {RNA815_24291.1}
9. MligTC455_12488 33 0.69 Mlig455_070755

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_070755 {REF} {Length: 487} {NoTransDecoderORF}
10. MligTC455_32466 243 5.07 Mlig455_063120

Neo: Irradiation

Age: -

 0.987 - - 0.987 - - - Mlig455_063120 {REF} {Length: 1301} {Pfam: Nucleoplasmin/nucleophosmin domain [PF03066.17, score=44.1]} {RNA1509_57793} {RNA1310_29505} {RNA815_13319}
11. MligTC455_24676 40 0.82 Mlig455_040646

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_040646 {REF} {Length: 1154} {RNA1509_16274} {RNA1310_10738}
12. MligTC455_41874 41 0.85 Mlig455_052428

Neo: Int S/G2/M

Age: Up-Down-Up

 CBFB 0.974 - - - - 0.974 - Mlig455_052428 {REF} {Length: 2121} {Pfam: Core binding factor beta subunit [PF02312.19, score=118.4]} {Human: ENSG00000067955, CBFB, core-binding factor subunit beta, [Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [RH, Score=96.7, Expect=3e-21]} {Dmel: FBgn0013755, Bro, Brother, [Score=60.1, Expect=4e-10]} {Celegans: WBGene00008559, F07H5.8, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_2875_0_2, dd_Smed_v6_2875_0_2, [Score=57.8, Expect=1e-10]} {RNA1310_39433} {RNA815_32396}
13. MligTC455_32018 26 0.54 Mlig455_053306

Neo: -

Age: Down-Up-Down

 FGB 0.972 - - - - 0.972 - Mlig455_053306 {REF} {Length: 1220} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=50.0]} {Human: ENSG00000171564, FGB, fibrinogen beta chain, [Score=45.4, Expect=7e-06]} {Mouse: ENSMUSG00000033831, Fgb, fibrinogen beta chain, [Score=45.4, Expect=4e-06]} {Dmel: FBgn0033312, CG8642, [Score=48.1, Expect=3e-07]} {RNA1509_44563} {RNA1310_24923} {RNA815_54912}
14. MligTC455_33776 308 6.42 Mlig455_016307, Mlig455_016503

Neo: Irradiation

Age: -

Region-enriched R4: 1.969/0.02912

 ZNF180, ZNF420 0.969 - - - - 0.969 -

Mlig455_016307 {REF} {Length: 4169} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=451.3]; Zinc finger, C2H2 type [PF00096.28, score=282.1]; C2H2-type zinc finger [PF13894.8, score=217.4]; C2H2-type zinc finger [PF13912.8, score=194.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=162.4]; Zinc-finger of C2H2 type [PF12874.9, score=102.5]; Family of unknown function (DUF5810) [PF19126.2, score=71.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=59.3]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=53.8]; Zinc ribbon domain [PF09723.12, score=44.9]; KIAA1045 RING finger [PF16744.7, score=44.6]; Transcription elongation factor Elf1 like [PF05129.15, score=40.6]; PHD-finger [PF16866.7, score=37.2]; DNA ligase OB-like domain [PF14743.8, score=35.9]; XPA protein N-terminal [PF01286.20, score=35.8]; zinc-ribbon family [PF17032.7, score=34.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=32.3]; BolA-like protein [PF01722.20, score=29.8]; C1 domain [PF03107.18, score=28.6]; Immunoglobulin C1-set domain [PF07654.17, score=28.5]; BED zinc finger [PF02892.17, score=27.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=27.4]; AN1-like Zinc finger [PF01428.18, score=26.9]; Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=25.3]} {Human: ENSG00000197050, ZNF420, zinc finger protein 420, [Score=579, Expect=0.0]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=555, Expect=0.0]} {Mouse: ENSMUSG00000078875, Gm14419, predicted gene 14419, [RH, Score=555, Expect=0.0]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [RH, Score=555, Expect=0.0]} {Dmel: FBgn0020309, crol, crooked legs, [RH, Score=391, Expect=7e-125]} {Celegans: WBGene00021931, Y55F3AM.14, [RH, Score=204, Expect=1e-57]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [RH, Score=172, Expect=2e-48]} {RNA1509_28529, RNA1509_39635} {RNA1310_55352.2, RNA1509_28529} {RNA1509_28529, RNA815_4024.1}

Mlig455_016503 {REF} {Length: 3551} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=138.9]; Zinc finger, C2H2 type [PF00096.28, score=91.2]; C2H2-type zinc finger [PF13894.8, score=83.9]; C2H2-type zinc finger [PF13912.8, score=68.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=44.4]; Zinc-finger of C2H2 type [PF12874.9, score=37.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=27.6]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=26.2]; C1 domain [PF03107.18, score=22.5]; Zinc ribbon domain [PF09723.12, score=22.5]; Family of unknown function (DUF5830) [PF19148.2, score=21.5]; AN1-like Zinc finger [PF01428.18, score=21.0]; PHD-finger [PF16866.7, score=20.6]; zinc-finger C2H2-type [PF16622.7, score=19.1]; DNA ligase OB-like domain [PF14743.8, score=18.6]} {Human: ENSG00000167384, ZNF180, zinc finger protein 180, [Score=210, Expect=3e-61]; ENSG00000196437, ZNF569, zinc finger protein 569, [Score=206, Expect=1e-59]; ENSG00000170100, ZNF778, zinc finger protein 778, [Score=205, Expect=2e-59]; ENSG00000176371, ZSCAN2, zinc finger and SCAN domain containing 2, [Score=205, Expect=3e-61]; ENSG00000124459, ZNF45, zinc finger protein 45, [Score=204, Expect=3e-59]; ENSG00000242852, ZNF709, zinc finger protein 709, [Score=202, Expect=9e-59]; ENSG00000196826, AC008758.1, novel zinc finger protein, [Score=202, Expect=9e-59]; ENSG00000147117, ZNF157, zinc finger protein 157, [Score=201, Expect=4e-59]} {Mouse: ENSMUSG00000044296, Zfp879, zinc finger protein 879, [Score=206, Expect=2e-61]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=206, Expect=2e-60]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=206, Expect=5e-60]; ENSMUSG00000095362, Gm14325, predicted gene 14325, [Score=206, Expect=1e-61]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=204, Expect=1e-60]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=204, Expect=5e-59]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=203, Expect=2e-60]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=203, Expect=2e-60]; ENSMUSG00000090093, Gm14399, predicted gene 14399, [Score=203, Expect=2e-59]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=203, Expect=2e-60]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=203, Expect=2e-60]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=203, Expect=2e-60]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=203, Expect=2e-60]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=203, Expect=2e-60]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=201, Expect=3e-57]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=200, Expect=4e-58]; ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=200, Expect=6e-58]; ENSMUSG00000078862, Gm14326, predicted gene 14326, [Score=199, Expect=2e-58]; ENSMUSG00000095199, Zfp967, zinc finger protein 967, [Score=198, Expect=1e-58]; ENSMUSG00000089756, Zfp966, zinc finger protein 966, [Score=198, Expect=1e-58]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=198, Expect=1e-57]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=198, Expect=3e-57]; ENSMUSG00000078898, Zfp968, zinc finger protein 968, [Score=198, Expect=1e-58]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=198, Expect=1e-57]; ENSMUSG00000095545, Zfp969, zinc finger protein 969, [Score=198, Expect=1e-58]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=198, Expect=4e-58]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=197, Expect=2e-58]; ENSMUSG00000078866, Zfp970, zinc finger protein 970, [Score=197, Expect=9e-58]; ENSMUSG00000078887, Gm6710, predicted gene 6710, [Score=196, Expect=3e-57]; ENSMUSG00000078903, Gm14391, predicted gene 14391, [Score=196, Expect=1e-57]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=152, Expect=3e-40]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=130, Expect=1e-34]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=139, Expect=8e-38]} {RNA1509_39635} {RNA1310_36542.1} {RNA815_18593.2}
15. MligTC455_53177 99 2.05 Mlig455_046372

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-2.065

Region-enriched R5: 3.084/0.00768

 GRM4 0.962 - - 0.962 - - - Mlig455_046372 {REF} {Length: 3290} {Pfam: Receptor family ligand binding region [PF01094.30, score=126.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=97.5]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=38.0]; Periplasmic binding protein [PF13458.8, score=23.0]} {Human: ENSG00000124493, GRM4, glutamate metabotropic receptor 4, [Score=194, Expect=1e-50]; ENSG00000164082, GRM2, glutamate metabotropic receptor 2, [Score=189, Expect=3e-49]; ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=188, Expect=9e-49]} {Mouse: ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=197, Expect=7e-52]} {Dmel: FBgn0050361, mtt, mangetout, [Score=189, Expect=3e-49]} {Celegans: WBGene00003233, mgl-2, Metabotropic GLutamate receptor family, [Score=179, Expect=3e-46]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=209, Expect=5e-56]} {RNA1509_48023} {RNA1310_80724} {RNA815_19863}
16. MligTC455_33823 22 0.45 Mlig455_015132, Mlig455_037776

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_015132 {REF} {Length: 409} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}

Mlig455_037776 {REF} {Length: 423} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}
17. MligTC455_23918 278 5.79 Mlig455_030499

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_030499 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=49.1]; Methyltransferase domain [PF08241.14, score=46.1]; Methyltransferase domain [PF08242.14, score=29.7]; Methyltransferase domain [PF13847.8, score=28.6]; Methyltransferase domain [PF13489.8, score=24.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_45705}
18. MligTC455_30489 4 0.08 Mlig455_071142

Neo: -

Age: Up-Down-Up

 ANK1 0.954 - - - - 0.954 - Mlig455_071142 {REF} {Length: 9102} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=228.6]; Ankyrin repeats (many copies) [PF13637.8, score=185.8]; Ankyrin repeat [PF00023.32, score=171.4]; Ankyrin repeat [PF13606.8, score=142.9]; Ankyrin repeats (many copies) [PF13857.8, score=130.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=211, Expect=3e-54]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=207, Expect=2e-53]; ENSG00000145362, ANK2, ankyrin 2, [Score=206, Expect=5e-53]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=209, Expect=5e-54]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=206, Expect=4e-53]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=202, Expect=1e-51]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=194, Expect=1e-49]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=203, Expect=2e-52]} {Smed: dd_Smed_v6_2072_0_6, dd_Smed_v6_2072_0_6, [Score=200, Expect=2e-51]} {RNA1509_22653} {RNA1310_2705} {RNA815_818}
19. MligTC455_53255 413 8.6 Mlig455_014908

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.974/0.00170

 MAD2L1 0.954 - - 0.954 - - - Mlig455_014908 {REF} {Length: 2989} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.5]; HORMA domain [PF02301.20, score=49.3]; Integrase core domain [PF00665.28, score=38.6]; H2C2 zinc finger [PF09337.12, score=28.2]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [Score=114, Expect=7e-29]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [Score=112, Expect=2e-28]} {Dmel: FBgn0035640, mad2, [Score=90.9, Expect=1e-20]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [Score=101, Expect=2e-25]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=172, Expect=2e-48]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365}
20. MligTC455_17009 1195 24.89 Mlig455_055132

Neo: -

Age: Up-Down-Up

Region-enriched R5: 7.576/0.00000

 ANK1 0.952 - - - - 0.952 - Mlig455_055132 {REF} {Length: 618} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_29243, RNA1509_5324} {RNA1310_89627, RNA1509_29243} {RNA1509_29243, RNA815_5423.3}
21. MligTC455_28797 142 2.95 Mlig455_016275

Neo: -

Age: -

 SRR 0.952 - - 0.952 - - - Mlig455_016275 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=180.7]; Glycogen debranching enzyme N terminal [PF12439.10, score=18.7]} {Human: ENSG00000167720, SRR, serine racemase, [Score=106, Expect=1e-25]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=94.7, Expect=2e-21]} {Dmel: FBgn0037684, CG8129, [Score=88.2, Expect=5e-19]} {Celegans: WBGene00010456, K01C8.1, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=114, Expect=3e-28]} {RNA1509_48799, RNA1509_54968, RNA1509_59455} {RNA1310_28701.1, RNA1509_48799, RNA1509_59455} {RNA1509_48799, RNA1509_59455, RNA815_19720}
22. MligTC455_41068 446 9.3 Mlig455_056855

Neo: Irradiation

Age: -

Region-enriched R5: 1.667/0.00021

 0.952 - - 0.952 - - - Mlig455_056855 {REF} {Length: 1981} {TRANSSPLICED} {RNA1509_31671, RNA1509_59995} {RNA1310_14658, RNA1509_31671, RNA1509_59995} {RNA1509_31671, RNA1509_59995, RNA815_25339}
23. MligTC455_37717 9 0.18 Mlig455_068556

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_068556 {REF} {Length: 1617} {RNA1509_17406} {RNA1310_3508} {RNA815_3588}
24. MligTC455_27362 102 2.13 Mlig455_014697, Mlig455_014740

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.978

Region-enriched R7: 4.693/0.00015

 ANGPTL2 0.95 - - 0.950 - - -

Mlig455_014697 {REF} {Length: 1087} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=78.6]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=77.4, Expect=5e-15]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=77.4, Expect=5e-15]; ENSG00000120332, TNN, tenascin N, [Score=73.9, Expect=1e-13]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=77.8, Expect=2e-15]} {Dmel: FBgn0051832, CG31832, [Score=73.2, Expect=9e-15]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=53.9, Expect=8e-08]} {RNA1509_21789} {RNA1310_30528} {RNA815_9549.3}

Mlig455_014740 {REF} {Length: 1120} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=78.6]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=77.4, Expect=5e-15]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=77.4, Expect=5e-15]; ENSG00000120332, TNN, tenascin N, [Score=73.9, Expect=1e-13]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=77.8, Expect=2e-15]} {Dmel: FBgn0051832, CG31832, [Score=73.2, Expect=9e-15]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=53.9, Expect=8e-08]} {RNA1509_21789} {RNA1310_30528} {RNA815_9549.3}
25. MligTC455_34111 183 3.81 Mlig455_013788, Mlig455_013920

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 3.041/0.00076

 TRPA1 0.95 - - 0.950 - - -

Mlig455_013788 {REF} {Length: 4648} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=198.0]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeat [PF00023.32, score=144.1]; Ankyrin repeats (many copies) [PF13857.8, score=143.7]; Ankyrin repeat [PF13606.8, score=139.8]; Ion transport protein [PF00520.33, score=19.2]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=157, Expect=2e-38]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=176, Expect=2e-44]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=124, Expect=3e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=133, Expect=4e-31]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=235, Expect=6e-64]} {RNA1509_8073} {RNA1310_3083.1} {RNA815_994.1}

Mlig455_013920 {REF} {Length: 4556} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=199.9]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeats (many copies) [PF13857.8, score=143.3]; Ankyrin repeat [PF00023.32, score=143.2]; Ankyrin repeat [PF13606.8, score=138.4]; Ion transport protein [PF00520.33, score=19.9]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=194, Expect=7e-50]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=195, Expect=3e-50]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=204, Expect=3e-53]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=149, Expect=3e-36]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=288, Expect=3e-81]} {RNA1509_8073} {RNA1310_2090.2, RNA1509_8073} {RNA1509_8073, RNA815_994.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA