TomoSeq data search

Data search

Results for MligTC455_50490

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50490

1671

34.82

Mlig455_015914, Mlig455_059673

Neo: -

Age: -

BCL2L1

Mlig455_015914 {REF} {Length: 2999} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=66.9]} {Human: ENSG00000171552, BCL2L1, BCL2 like 1, [Score=70.1, Expect=2e-13]; ENSG00000087088, BAX, BCL2 associated X, apoptosis regulator, [Score=66.6, Expect=2e-12]} {Mouse: ENSMUSG00000007659, Bcl2l1, BCL2-like 1, [Score=68.2, Expect=9e-13]} {RNA1509_33482, RNA1509_4496} {RNA1310_3148.1, RNA1509_33482, RNA1509_4496} {RNA1509_33482, RNA1509_4496, RNA815_3879}

Mlig455_059673 {REF} {Length: 3294} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=67.0]} {Human: ENSG00000171552, BCL2L1, BCL2 like 1, [Score=69.7, Expect=2e-13]; ENSG00000087088, BAX, BCL2 associated X, apoptosis regulator, [Score=67.4, Expect=8e-13]} {Mouse: ENSMUSG00000007659, Bcl2l1, BCL2-like 1, [Score=67.8, Expect=1e-12]} {RNA1509_37129, RNA1509_4496} {RNA1310_3148.1, RNA1509_37129} {RNA1509_37129, RNA815_3879}

Cumulative graph for MligTC455_50490

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.433	5.229	0.46123	1.00000
RegionR2	-0.85	5.229	0.01031	0.10285
RegionR3	-0.36	5.229	0.19214	0.72942
RegionR4	0.126	5.229	0.69890	0.98780
RegionR5	0.578	5.229	0.01961	0.09565
RegionR6	-0.007	5.229	0.97979	1.00000
RegionR7	-0.031	5.229	0.92396	1.00000
RegionR8	0.111	5.229	0.76651	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.192	5.229	0.17401	0.91661
RegenerationR2	0.197	5.229	0.53835	0.88751
RegenerationR3	-0.516	5.229	0.13029	0.55339
RegenerationR4	-0.339	5.229	0.32299	0.76092
RegenerationR5	-0.477	5.229	0.13179	0.53874
RegenerationR6	-0.597	5.229	0.08252	0.35882
RegenerationBL	-1.479	5.229	0.00035	0.01110
RegenerationTP	-0.617	5.229	0.11320	0.51676

Genes with expression patterns similar to MligTC455_50490

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50490	1671	34.82	Mlig455_015914, Mlig455_059673	Neo: - Age: -	BCL2L1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015914 {REF} {Length: 2999} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=66.9]} {Human: ENSG00000171552, BCL2L1, BCL2 like 1, [Score=70.1, Expect=2e-13]; ENSG00000087088, BAX, BCL2 associated X, apoptosis regulator, [Score=66.6, Expect=2e-12]} {Mouse: ENSMUSG00000007659, Bcl2l1, BCL2-like 1, [Score=68.2, Expect=9e-13]} {RNA1509_33482, RNA1509_4496} {RNA1310_3148.1, RNA1509_33482, RNA1509_4496} {RNA1509_33482, RNA1509_4496, RNA815_3879} Mlig455_059673 {REF} {Length: 3294} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=67.0]} {Human: ENSG00000171552, BCL2L1, BCL2 like 1, [Score=69.7, Expect=2e-13]; ENSG00000087088, BAX, BCL2 associated X, apoptosis regulator, [Score=67.4, Expect=8e-13]} {Mouse: ENSMUSG00000007659, Bcl2l1, BCL2-like 1, [Score=67.8, Expect=1e-12]} {RNA1509_37129, RNA1509_4496} {RNA1310_3148.1, RNA1509_37129} {RNA1509_37129, RNA815_3879}
2.	MligTC455_27098	364	7.58	Mlig455_038070	Neo: - Age: Up-Down-Down, logFC(26M/2M)=1.628	SAA1	0.981	-	-	-	-	0.981	-	Mlig455_038070 {REF} {Length: 2774} {Pfam: Serum amyloid A protein [PF00277.20, score=66.0]} {Human: ENSG00000173432, SAA1, serum amyloid A1, [RH, Score=53.9, Expect=2e-09]; ENSG00000134339, SAA2, serum amyloid A2, [RH, Score=53.1, Expect=4e-09]} {Mouse: ENSMUSG00000040026, Saa3, serum amyloid A 3, [RH, Score=61.2, Expect=2e-12]; ENSMUSG00000074115, Saa1, serum amyloid A 1, [RH, Score=60.1, Expect=6e-12]; ENSMUSG00000057465, Saa2, serum amyloid A 2, [RH, Score=59.7, Expect=4e-12]} {RNA1509_11884, RNA1509_32696, RNA1509_34673} {RNA1310_25670.1, RNA1509_32696, RNA1509_34673} {RNA1509_32696, RNA1509_34673, RNA815_10405}
3.	MligTC455_36440	1214	25.3	Mlig455_065771, Mlig455_065794	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_065771 {REF} {Length: 587} {TRANSSPLICED} {RNA1509_5816} {RNA1310_19872} {RNA815_58845} Mlig455_065794 {REF} {Length: 510} {TRANSSPLICED} {RNA1509_5816} {RNA1310_19872} {RNA815_58845}
4.	MligTC455_35002	390	8.12	Mlig455_070372	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.711	SVEP1	0.968	-	-	-	-	0.968	-	Mlig455_070372 {REF} {Length: 1042} {Pfam: EGF-like domain [PF00008.29, score=33.8]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=51.6, Expect=3e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0004647, N, Notch, [Score=50.1, Expect=4e-07]} {RNA1509_29817} {RNA1310_28236} {RNA815_11876.1}
5.	MligTC455_44184	101	2.11	Mlig455_012174	Neo: Irradiation Age: -	MGAT1	0.961	-	-	-	-	0.961	-	Mlig455_012174 {REF} {Length: 1520} {Pfam: GNT-I family [PF03071.17, score=64.8]; Lectin C-type domain [PF00059.23, score=39.5]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=59.7, Expect=4e-09]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=66.2, Expect=2e-11]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=69.7, Expect=1e-12]} {Celegans: WBGene00001637, gly-12, GLYcosylation related; UDP-N-acetylglucosamine:a-3-D-mannoside b-1,2-N-acetylglucosaminyltransferase I, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=64.3, Expect=4e-11]} {RNA1509_44523} {RNA1310_41618} {RNA815_32434}
6.	MligTC455_48539	332	6.92	Mlig455_064489	Neo: - Age: logFC(26M/2M)=-0.444		0.959	-	-	-	-	0.959	-	Mlig455_064489 {REF} {Length: 1365} {TRANSSPLICED} {Celegans: WBGene00016619, C43H6.6, [Score=53.9, Expect=1e-07]} {RNA1509_12795} {RNA1310_25196} {RNA815_9417}
7.	MligTC455_16500	246	5.13	Mlig455_043138	Neo: - Age: -	TRIM3	0.958	-	-	-	-	0.958	-	Mlig455_043138 {REF} {Length: 921} {Pfam: NHL repeat [PF01436.23, score=31.6]; PQQ-like domain [PF13360.8, score=20.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=48.9, Expect=2e-06]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=48.5, Expect=2e-06]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=48.5, Expect=2e-06]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=48.1, Expect=2e-06]} {RNA1509_57271} {RNA1310_29301, RNA1509_57271} {RNA1509_57271, RNA815_3900.1}
8.	MligTC455_45964	474	9.88	Mlig455_046888	Neo: - Age: - Region-enriched R2: 1.528/0.03625	CYB5R4	0.957	-	-	-	-	0.957	-	Mlig455_046888 {REF} {Length: 2950} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=32.2} {Pfam: Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=85.8]; Oxidoreductase NAD-binding domain [PF00175.23, score=54.7]; Oxidoreductase FAD-binding domain [PF00970.26, score=38.6]} {Human: ENSG00000065615, CYB5R4, cytochrome b5 reductase 4, [RH, Score=140, Expect=1e-35]} {Mouse: ENSMUSG00000032872, Cyb5r4, cytochrome b5 reductase 4, [RH, Score=142, Expect=4e-36]} {Dmel: FBgn0034442, CG11257, [RH, Score=147, Expect=4e-38]} {Celegans: WBGene00013123, Y52B11A.3, [RH, Score=169, Expect=4e-46]} {Smed: dd_Smed_v6_8629_0_1, dd_Smed_v6_8629_0_1, [RH, Score=146, Expect=5e-38]} {RNA1509_18530} {RNA1310_12400, RNA1509_18530} {RNA1509_18530, RNA815_28929}
9.	MligTC455_48540	385	8.02	Mlig455_066052	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_066052 {REF} {Length: 1122} {RNA1509_12795} {RNA1310_25196} {RNA815_9417}
10.	MligTC455_33860	384	8.01	Mlig455_024990, Mlig455_025004	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.340 Region-enriched R2: 4.294/0.00006		0.953	-	-	-	-	0.953	-	Mlig455_024990 {REF} {Length: 1540} {RNA1509_36587} {RNA1310_35553} {RNA815_21400} Mlig455_025004 {REF} {Length: 1546} {RNA1509_36587} {RNA1310_35553} {RNA815_21400}
11.	MligTC455_37793	353	7.36	Mlig455_066109, Mlig455_068663	Neo: - Age: Up-Down-Down	HMCN1	0.953	-	-	-	-	0.953	-	Mlig455_066109 {REF} {Length: 7924} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=408.1]; Spondin-like TSP1 domain [PF19028.2, score=285.5]; Polycystin cation channel [PF08016.14, score=239.7]; PLAT/LH2 domain [PF01477.25, score=86.7]; Thrombospondin type 1 domain [PF19030.2, score=78.4]; Ion transport protein [PF00520.33, score=42.7]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=360, Expect=8e-99]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=363, Expect=7e-100]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=199, Expect=5e-51]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [RH, Score=306, Expect=4e-84]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [RH, Score=944, Expect=0.0]} {RNA1509_9601} {RNA1310_488} {RNA815_1711} Mlig455_068663 {REF} {Length: 7866} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=423.7]; Spondin-like TSP1 domain [PF19028.2, score=299.7]; Thrombospondin type 1 domain [PF19030.2, score=92.3]; PLAT/LH2 domain [PF01477.25, score=23.1]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=338, Expect=1e-94]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=341, Expect=9e-96]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=189, Expect=2e-48]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [RH, Score=303, Expect=2e-84]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=282, Expect=3e-77]} {RNA1509_9601} {RNA1310_488} {RNA815_1711}
12.	MligTC455_21926	225	4.69	Mlig455_003629	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_003629 {REF} {Length: 2548} {RNA1509_15605} {RNA1310_4409.1} {RNA815_14135}
13.	MligTC455_42115	167	3.49	Mlig455_034257	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_034257 {REF} {Length: 1854} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=88.5]} {Dmel: FBgn0032506, CG9395, [Score=84.0, Expect=8e-17]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=204, Expect=1e-60]} {RNA1310_14481.1} {RNA815_5740.1}

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