TomoSeq data search

Data search

Results for MligTC455_50585

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50585

834

17.38

Mlig455_050501

Neo: -

Age: -

Region-enriched R3: 3.963/0.00000
Region-enriched R2: 3.324/0.00137

Mlig455_050501 {REF} {Length: 1129} {RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134} {RNA1310_12034.2, RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134} {RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134, RNA815_3833}

Cumulative graph for MligTC455_50585

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.035	4.475	0.43096	1.00000
RegionR2	3.324	4.475	0.00002	0.00137
RegionR3	3.963	4.475	0.00000	0.00000
RegionR4	1.969	4.475	0.01202	0.07007
RegionR5	0.691	4.475	0.36432	0.71678
RegionR6	-0.893	4.475	0.97371	1.00000
RegionR7	-2.843	4.475	1.00000	1.00000
RegionR8	-7.247	4.475	0.00211	0.07775

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.633	4.475	0.04764	0.68857
RegenerationR2	-1.528	4.475	0.01834	0.22204
RegenerationR3	-1.166	4.475	0.06879	0.44047
RegenerationR4	0.017	4.475	0.97879	1.00000
RegenerationR5	0.329	4.475	0.63204	0.92321
RegenerationR6	1.713	4.475	0.03107	0.22005
RegenerationBL	3.158	4.475	0.01566	0.13205
RegenerationTP	4.352	4.475	0.00913	0.16105

Genes with expression patterns similar to MligTC455_50585

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50585	834	17.38	Mlig455_050501	Neo: - Age: - Region-enriched R3: 3.963/0.00000 Region-enriched R2: 3.324/0.00137		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050501 {REF} {Length: 1129} {RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134} {RNA1310_12034.2, RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134} {RNA1509_15057, RNA1509_33784, RNA1509_34408, RNA1509_50134, RNA815_3833}
2.	MligTC455_27144	3959	82.47	Mlig455_010234	Neo: - Age: logFC(26M/2M)=-2.003 Region-enriched R3: 6.983/0.00000 Region-enriched R2: 5.555/0.00267		4.307	-	0.877	0.971	0.834	0.763	0.862	Mlig455_010234 {REF} {Length: 439} {RNA1509_34122, RNA1509_54249, RNA1509_5614} {RNA1310_56673, RNA1509_34122, RNA1509_54249, RNA1509_5614} {RNA1509_34122, RNA1509_54249, RNA1509_5614, RNA815_23606.1}
3.	MligTC455_36996	285	5.93	Mlig455_050334	Neo: - Age: - Region-enriched R2: 6.300/0.00168 Region-enriched R3: 4.887/0.00251	CACNA1C	3.506	-	-	0.950	0.893	0.759	0.904	Mlig455_050334 {REF} {Length: 4859} {Pfam: Ion transport protein [PF00520.33, score=618.4]; FAM176 family [PF14851.8, score=22.7]; Polycystin cation channel [PF08016.14, score=21.8]} {Human: ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1126, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1126, Expect=0.0]; ENSG00000081248, CACNA1S, calcium voltage-gated channel subunit alpha1 S, [Score=1110, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=1073, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [Score=1125, Expect=0.0]; ENSMUSG00000026407, Cacna1s, calcium channel, voltage-dependent, L type, alpha 1S subunit, [Score=1100, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=1219, Expect=0.0]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=785, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_18, dd_Smed_v6_8899_0_18, [Score=1230, Expect=0.0]} {RNA1509_10231} {RNA1310_369.1, RNA1509_10231} {RNA1509_10231, RNA815_298.1}
4.	MligTC455_51261	88	1.84	Mlig455_036952	Neo: - Age: Down-Down-Down		3.409	-	0.834	-	0.902	0.723	0.950	Mlig455_036952 {REF} {Length: 3945} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=92.5]; Domain of unknown function (DUF4615) [PF15393.8, score=57.4]} {Mouse: ENSMUSG00000063236, 1110038F14Rik, RIKEN cDNA 1110038F14 gene, [RH, Score=55.1, Expect=4e-08]} {Dmel: FBgn0038673, CG14286, [RH, Score=53.9, Expect=5e-08]} {Smed: dd_Smed_v6_10522_0_1, dd_Smed_v6_10522_0_1, [Score=63.2, Expect=3e-10]} {RNA1509_16748} {RNA1310_30400} {RNA815_28361}
5.	MligTC455_41764	28	0.58	Mlig455_067189	Neo: - Age: -		1.855	-	-	-	0.902	-	0.953	Mlig455_067189 {REF} {Length: 1210} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Smed: dd_Smed_v6_21509_0_1, dd_Smed_v6_21509_0_1, [Score=51.2, Expect=4e-07]} {RNA1310_24513} {RNA815_25505}
6.	MligTC455_11246	472	9.83	Mlig455_061054	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.755		1.835	-	-	-	0.959	-	0.876	Mlig455_061054 {REF} {Length: 1700} {TRANSSPLICED} {RNA1509_32947, RNA1509_53119, RNA1509_59702} {RNA1310_16478, RNA1509_53119, RNA1509_59702} {RNA1509_53119, RNA1509_59702, RNA815_10245.1}
7.	MligTC455_13669	41	0.85	Mlig455_068960	Neo: - Age: -		1.822	-	-	0.838	0.984	-	-	Mlig455_068960 {REF} {Length: 2108} {Pfam: ZIP Zinc transporter [PF02535.24, score=31.7]} {Celegans: WBGene00018897, zipt-2.4, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=47.8, Expect=1e-05]} {RNA1310_20142} {RNA815_47479}
8.	MligTC455_49408	17	0.36	Mlig455_063386	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_063386 {REF} {Length: 2333} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=40.2]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=53.5, Expect=2e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=58.9, Expect=3e-09]} {Smed: dd_Smed_v6_36108_0_1, dd_Smed_v6_36108_0_1, [RH, Score=86.3, Expect=6e-20]} {RNA1509_4998} {RNA1310_57149}
9.	MligTC455_45570	613	12.77	Mlig455_007708, Mlig455_021041	Neo: - Age: - Region-enriched R3: 1.944/0.04334 Region-enriched R5: 1.941/0.00940		0.973	-	-	-	-	0.973	-	Mlig455_007708 {REF} {Length: 1703} {Pfam: Protein of unknown function (DUF727) [PF05303.14, score=87.7]} {Dmel: FBgn0037156, CG11523, [RH, Score=56.2, Expect=1e-10]} {Celegans: WBGene00020782, T24H7.3, [RH, Score=70.5, Expect=3e-16]} {Smed: dd_Smed_v6_6352_0_1, dd_Smed_v6_6352_0_1, [RH, Score=67.4, Expect=2e-15]} {RNA1509_10758} {RNA1310_40383, RNA1509_10758} {RNA1509_10758, RNA815_28045} Mlig455_021041 {REF} {Length: 1784} {Pfam: Protein of unknown function (DUF727) [PF05303.14, score=87.8]} {Dmel: FBgn0037156, CG11523, [RH, Score=56.2, Expect=1e-10]} {Celegans: WBGene00020782, T24H7.3, [RH, Score=70.5, Expect=3e-16]} {Smed: dd_Smed_v6_6352_0_1, dd_Smed_v6_6352_0_1, [RH, Score=67.4, Expect=1e-15]} {RNA1509_10758} {RNA1310_40383} {RNA815_28045}
10.	MligTC455_12088	61	1.26	Mlig455_057931, Mlig455_057966	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_057931 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558} Mlig455_057966 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558}
11.	MligTC455_38578	34	0.71	Mlig455_039970, Mlig455_070840	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_039970 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576} Mlig455_070840 {REF} {Length: 1809} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.1} {RNA815_35576}
12.	MligTC455_43518	20	0.41	Mlig455_037187, Mlig455_052338	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.897		0.96	-	-	-	-	-	0.960	Mlig455_037187 {REF} {Length: 3652} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=189.1]; N-terminal C2 in EEIG1 and EHBP1 proteins [PF10358.11, score=18.5]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=70.1, Expect=4e-12]} {RNA1509_43072} {RNA1310_18123} {RNA815_7047} Mlig455_052338 {REF} {Length: 2834} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=180.5]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=69.7, Expect=5e-12]} {RNA1509_43072} {RNA1310_18123} {RNA815_7047}
13.	MligTC455_52747	11	0.22	Mlig455_063096	Neo: - Age: Up-Up-Down	SNTB1	0.96	-	-	-	-	0.960	-	Mlig455_063096 {REF} {Length: 3494} {Pfam: PDZ domain [PF00595.26, score=69.1]; PH domain [PF18012.3, score=53.5]; PH domain [PF00169.31, score=38.9]; PDZ domain [PF17820.3, score=25.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.5]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [Score=320, Expect=6e-103]; ENSG00000168807, SNTB2, syntrophin beta 2, [Score=319, Expect=2e-102]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [Score=318, Expect=2e-102]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [Score=310, Expect=4e-99]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=278, Expect=4e-86]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [Score=154, Expect=2e-41]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [RH, Score=377, Expect=5e-126]} {RNA1509_18297, RNA1509_45869} {RNA1310_10457, RNA1509_45869} {RNA1509_45869, RNA815_5015}
14.	MligTC455_54002	39320	819.17	Mlig455_062577	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.908 Region-enriched R2: 1.076/0.02199	HPGDS	0.957	0.957	-	-	-	-	-	Mlig455_062577 {REF} {Length: 1344} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=60.6]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=30.5]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=22.7]} {Human: ENSG00000163106, HPGDS, hematopoietic prostaglandin D synthase, [RH, Score=104, Expect=2e-27]} {Mouse: ENSMUSG00000029919, Hpgds, hematopoietic prostaglandin D synthase, [RH, Score=90.5, Expect=2e-22]} {Celegans: WBGene00001759, gst-11, Glutathione S-Transferase, [Score=98.2, Expect=1e-25]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=176, Expect=4e-56]} {RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612} {RNA1310_24762, RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612} {RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612, RNA815_10524}
15.	MligTC455_41542	144	2.99	Mlig455_017263	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.389	MYT1	0.95	-	-	-	0.950	-	-	Mlig455_017263 {REF} {Length: 3726} {Pfam: Zinc finger, C2HC type [PF01530.20, score=165.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.3]} {Human: ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=133, Expect=5e-31]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=133, Expect=5e-31]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=132, Expect=4e-31]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=127, Expect=2e-29]} {Mouse: ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=132, Expect=6e-31]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=127, Expect=2e-29]} {Dmel: FBgn0263772, CG43689, [RH, Score=100, Expect=5e-21]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [Score=112, Expect=7e-26]} {Smed: dd_Smed_v6_18107_0_1, dd_Smed_v6_18107_0_1, [RH, Score=144, Expect=1e-37]} {RNA1310_62112} {RNA815_43721.1}

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