Data search
Results for MligTC455_50639
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50639 | 323 | 6.73 | Mlig455_027350 | Neo: Neoblast Age: logFC(26M/2M)=0.905 Regeneration-enriched BL: 2.624 |
SSRP1 | Mlig455_027350 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=82.5]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.1]; Histone chaperone Rttp106-like [PF08512.14, score=78.4]; HMG (high mobility group) box [PF00505.21, score=75.5]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=19.9]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=556, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=567, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=445, Expect=1e-145]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=385, Expect=4e-123]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=306, Expect=4e-95]} {RNA1509_24511, RNA1509_3392} {RNA1310_9322, RNA1509_24511, RNA1509_3392} {RNA1509_24511, RNA1509_3392, RNA815_4568} |
Cumulative graph for MligTC455_50639
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.692 | 3.255 | 0.59777 | 1.00000 | |
| RegionR2 | 0.485 | 3.255 | 0.44182 | 0.83096 | |
| RegionR3 | -0.409 | 3.255 | 0.39971 | 0.92806 | |
| RegionR4 | -0.109 | 3.255 | 0.86274 | 1.00000 | |
| RegionR5 | 0.405 | 3.255 | 0.29730 | 0.63148 | |
| RegionR6 | -0.431 | 3.255 | 0.40090 | 0.97166 | |
| RegionR7 | 0.998 | 3.255 | 0.11595 | 0.64442 | |
| RegionR8 | -1.631 | 3.255 | 0.18411 | 0.77083 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.002 | 3.255 | 0.61127 | 1.00000 | |
| RegenerationR2 | 1.203 | 3.255 | 0.01333 | 0.18828 | |
| RegenerationR3 | 1.847 | 3.255 | 0.00055 | 0.03460 | |
| RegenerationR4 | 0.862 | 3.255 | 0.11779 | 0.52331 | |
| RegenerationR5 | 0.442 | 3.255 | 0.31436 | 0.73913 | |
| RegenerationR6 | 2.283 | 3.255 | 0.00002 | 0.00337 | |
| RegenerationBL | 2.624 | 3.255 | 0.00016 | 0.00636 | |
| RegenerationTP | 0.494 | 3.255 | 0.62041 | 0.97279 |
Genes with expression patterns similar to MligTC455_50639
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50639 | 323 | 6.73 | Mlig455_027350 | Neo: Neoblast Age: logFC(26M/2M)=0.905 Regeneration-enriched BL: 2.624 |
SSRP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027350 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=82.5]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.1]; Histone chaperone Rttp106-like [PF08512.14, score=78.4]; HMG (high mobility group) box [PF00505.21, score=75.5]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=19.9]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=556, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=567, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=445, Expect=1e-145]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=385, Expect=4e-123]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=306, Expect=4e-95]} {RNA1509_24511, RNA1509_3392} {RNA1310_9322, RNA1509_24511, RNA1509_3392} {RNA1509_24511, RNA1509_3392, RNA815_4568} |
| 2. | MligTC455_42099 | 565 | 11.78 | Mlig455_066671 | Neo: - Age: - |
SEC11C | 2.472 | 0.713 | - | - | 0.962 | - | 0.797 | Mlig455_066671 {REF} {Length: 1546} {TRANSSPLICED} {Pfam: Peptidase S24-like [PF00717.25, score=34.1]} {Human: ENSG00000166562, SEC11C, SEC11 homolog C, signal peptidase complex subunit, [RH, Score=283, Expect=4e-98]; ENSG00000140612, SEC11A, SEC11 homolog A, signal peptidase complex subunit, [RH, Score=276, Expect=6e-96]} {Mouse: ENSMUSG00000024516, Sec11c, SEC11 homolog C, signal peptidase complex subunit, [RH, Score=282, Expect=6e-98]; ENSMUSG00000025724, Sec11a, SEC11 homolog A, signal peptidase complex subunit, [RH, Score=278, Expect=1e-96]} {Dmel: FBgn0262801, twr, twisted bristles roughened eye, [RH, Score=275, Expect=2e-95]} {Celegans: WBGene00021844, Y54E10BR.5, Signal peptidase complex catalytic subunit SEC11, [RH, Score=278, Expect=8e-97]} {Smed: dd_Smed_v6_806_0_1, dd_Smed_v6_806_0_1, [RH, Score=289, Expect=3e-101]} {RNA1509_12754} {RNA1310_22702.2} {RNA815_24041} |
| 3. | MligTC455_54102 | 228 | 4.75 | Mlig455_012249, Mlig455_012262, Mlig455_052497 | Neo: - Age: logFC(26M/2M)=0.459 Region-enriched R5: 3.431/0.00196 |
2.458 | 0.737 | - | 0.965 | - | 0.756 | - | Mlig455_012249 {REF} {Length: 1454} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} Mlig455_012262 {REF} {Length: 1597} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} Mlig455_052497 {REF} {Length: 1723} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} |
|
| 4. | MligTC455_12648 | 44 | 0.92 | Mlig455_060492 | Neo: Int S/G2/M Age: - |
0.975 | - | - | - | 0.975 | - | - | Mlig455_060492 {REF} {Length: 1521} {NoTransDecoderORF} {RNA1310_65147} | |
| 5. | MligTC455_31306 | 116 | 2.42 | Mlig455_042512 | Neo: - Age: Down-Up-Down |
0.971 | - | - | 0.971 | - | - | - | Mlig455_042512 {REF} {Length: 844} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} | |
| 6. | MligTC455_52864 | 118 | 2.45 | Mlig455_070404 | Neo: - Age: - |
0.969 | - | - | 0.969 | - | - | - | Mlig455_070404 {REF} {Length: 475} {NoTransDecoderORF} {RNA1509_57987} {RNA1310_20286.1} {RNA815_21366} | |
| 7. | MligTC455_31202 | 94 | 1.96 | Mlig455_022985, Mlig455_023076, Mlig455_027757 | Neo: - Age: - Region-enriched R4: 4.352/0.02010 |
0.958 | - | - | 0.958 | - | - | - | Mlig455_022985 {REF} {Length: 723} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_53492} {RNA815_53587} Mlig455_023076 {REF} {Length: 160} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_22457} Mlig455_027757 {REF} {Length: 7268} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_22457, RNA1509_23857} {RNA1509_23857, RNA815_53587} |
|
| 8. | MligTC455_19777 | 96 | 2.01 | Mlig455_043404 | Neo: - Age: - |
ARIH2 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_043404 {REF} {Length: 3423} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.5]; Ariadne domain [PF19422.1, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; zinc-RING finger domain [PF14634.8, score=19.5]; RING-type zinc-finger [PF13445.8, score=18.8]} {Human: ENSG00000177479, ARIH2, ariadne RBR E3 ubiquitin protein ligase 2, [RH, Score=434, Expect=7e-148]} {Mouse: ENSMUSG00000064145, Arih2, ariadne RBR E3 ubiquitin protein ligase 2, [RH, Score=432, Expect=2e-147]} {Dmel: FBgn0025186, ari-2, ariadne 2, [RH, Score=474, Expect=2e-163]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [RH, Score=407, Expect=9e-138]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [RH, Score=427, Expect=2e-145]} {RNA1509_24221, RNA1509_4785} {RNA1310_15084, RNA1509_24221, RNA1509_4785} {RNA1509_24221, RNA1509_4785, RNA815_5803} |
| 9. | MligTC455_48222 | 885 | 18.44 | Mlig455_031424, Mlig455_056469 | Neo: - Age: Down-Up-Up |
GFER | 0.95 | - | - | - | 0.950 | - | - | Mlig455_031424 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.4]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=147, Expect=2e-44]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=134, Expect=6e-39]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=1e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=160, Expect=8e-51]} {RNA1509_41230} {RNA1310_32417.1} {RNA815_24929} Mlig455_056469 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.3]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=149, Expect=5e-45]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=132, Expect=5e-38]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=2e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=161, Expect=6e-51]} {RNA1509_19287, RNA1509_41230} {RNA1310_32417.1, RNA1509_19287, RNA1509_41230} {RNA1509_19287, RNA1509_41230, RNA815_24929} |
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