TomoSeq data search

Data search

Results for MligTC455_50678

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50678

1625

33.86

Mlig455_011177

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 1.637

Region-enriched R4: 1.781/0.00001

Regeneration-downregulated R4: -1.494

Regeneration-depleted R4: -1.494

SIAH1

Mlig455_011177 {REF} {Length: 3249} {TRANSSPLICED} {Pfam: Seven in absentia protein family [PF03145.18, score=265.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.0]} {Human: ENSG00000196470, SIAH1, siah E3 ubiquitin protein ligase 1, [RH, Score=439, Expect=4e-155]} {Mouse: ENSMUSG00000040749, Siah1b, siah E3 ubiquitin protein ligase 1B, [RH, Score=441, Expect=4e-156]; ENSMUSG00000036840, Siah1a, siah E3 ubiquitin protein ligase 1A, [RH, Score=440, Expect=8e-156]} {Dmel: FBgn0003410, sina, seven in absentia, [RH, Score=415, Expect=1e-145]} {Celegans: WBGene00021369, siah-1, E3 ubiquitin-protein ligase siah-1, [RH, Score=400, Expect=4e-138]} {Smed: dd_Smed_v6_6226_0_1, dd_Smed_v6_6226_0_1, [RH, Score=434, Expect=8e-152]} {RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275} {RNA1310_22543, RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275} {RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275, RNA815_12169}

Cumulative graph for MligTC455_50678

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.738	5.282	0.25815	0.90645
RegionR2	-0.308	5.282	0.42512	0.81554
RegionR3	-0.53	5.282	0.10854	0.57374
RegionR4	1.781	5.282	0.00000	0.00001	Specific for R4: 1.637
RegionR5	-0.134	5.282	0.65605	1.00000
RegionR6	-0.147	5.282	0.64605	1.00000
RegionR7	-0.44	5.282	0.26418	0.89421
RegionR8	-0.96	5.282	0.05330	0.44997

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.909	5.282	0.32978	1.00000
RegenerationR2	0.298	5.282	0.40776	0.81846
RegenerationR3	0.273	5.282	0.48876	0.85380
RegenerationR4	-1.494	5.282	0.00015	0.00956	Specific for R4: -1.494
RegenerationR5	0.005	5.282	0.98934	1.00000
RegenerationR6	-0.025	5.282	0.94931	1.00000
RegenerationBL	0.495	5.282	0.23000	0.58078
RegenerationTP	0.079	5.282	0.86722	1.00000

Genes with expression patterns similar to MligTC455_50678

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50678	1625	33.86	Mlig455_011177	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 1.637 Region-enriched R4: 1.781/0.00001 Regeneration-downregulated R4: -1.494 Regeneration-depleted R4: -1.494	SIAH1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011177 {REF} {Length: 3249} {TRANSSPLICED} {Pfam: Seven in absentia protein family [PF03145.18, score=265.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.0]} {Human: ENSG00000196470, SIAH1, siah E3 ubiquitin protein ligase 1, [RH, Score=439, Expect=4e-155]} {Mouse: ENSMUSG00000040749, Siah1b, siah E3 ubiquitin protein ligase 1B, [RH, Score=441, Expect=4e-156]; ENSMUSG00000036840, Siah1a, siah E3 ubiquitin protein ligase 1A, [RH, Score=440, Expect=8e-156]} {Dmel: FBgn0003410, sina, seven in absentia, [RH, Score=415, Expect=1e-145]} {Celegans: WBGene00021369, siah-1, E3 ubiquitin-protein ligase siah-1, [RH, Score=400, Expect=4e-138]} {Smed: dd_Smed_v6_6226_0_1, dd_Smed_v6_6226_0_1, [RH, Score=434, Expect=8e-152]} {RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275} {RNA1310_22543, RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275} {RNA1509_14051, RNA1509_14860, RNA1509_15653, RNA1509_27777, RNA1509_32366, RNA1509_50022, RNA1509_58098, RNA1509_59275, RNA815_12169}
2.	MligTC455_20086	1852	38.57	Mlig455_025283, Mlig455_025311, Mlig455_025601	Neo: - Age: - Region-enriched R5: 1.400/0.00013	NKIRAS2	0.97	-	-	-	0.970	-	-	Mlig455_025283 {REF} {Length: 945} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=57.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=42.4]; ADP-ribosylation factor family [PF00025.23, score=33.8]; AAA domain [PF13476.8, score=30.7]} {Human: ENSG00000168256, NKIRAS2, NFKB inhibitor interacting Ras like 2, [RH, Score=144, Expect=2e-43]; ENSG00000197885, NKIRAS1, NFKB inhibitor interacting Ras like 1, [RH, Score=140, Expect=5e-42]} {Mouse: ENSMUSG00000017837, Nkiras2, NFKB inhibitor interacting Ras-like protein 2, [RH, Score=144, Expect=1e-43]; ENSMUSG00000021772, Nkiras1, NFKB inhibitor interacting Ras-like protein 1, [RH, Score=138, Expect=3e-41]} {Dmel: FBgn0040513, kappaB-Ras, [RH, Score=115, Expect=2e-32]} {Celegans: WBGene00009919, kbrl-1, NF-kappa-B inhibitor-interacting Ras-like protein, [RH, Score=80.5, Expect=6e-19]} {Smed: dd_Smed_v6_8564_0_1, dd_Smed_v6_8564_0_1, [RH, Score=141, Expect=8e-43]} {RNA1509_29090, RNA1509_54863} {RNA1310_36887, RNA1509_29090, RNA1509_54863} {RNA1509_29090, RNA1509_54863, RNA815_17538} Mlig455_025311 {REF} {Length: 1046} {Pfam: Ras family [PF00071.24, score=33.9]; ADP-ribosylation factor family [PF00025.23, score=21.6]} {Human: ENSG00000168256, NKIRAS2, NFKB inhibitor interacting Ras like 2, [Score=98.2, Expect=6e-25]; ENSG00000197885, NKIRAS1, NFKB inhibitor interacting Ras like 1, [Score=97.8, Expect=9e-25]} {Mouse: ENSMUSG00000017837, Nkiras2, NFKB inhibitor interacting Ras-like protein 2, [Score=98.6, Expect=3e-25]; ENSMUSG00000021772, Nkiras1, NFKB inhibitor interacting Ras-like protein 1, [Score=95.5, Expect=5e-24]} {Dmel: FBgn0040513, kappaB-Ras, [Score=72.4, Expect=2e-15]} {Celegans: WBGene00009919, kbrl-1, NF-kappa-B inhibitor-interacting Ras-like protein, [Score=62.4, Expect=9e-12]} {Smed: dd_Smed_v6_8564_0_1, dd_Smed_v6_8564_0_1, [Score=104, Expect=6e-28]} {RNA1509_54863} {RNA1310_36887} {RNA815_17538} Mlig455_025601 {REF} {Length: 941} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=56.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=42.4]; ADP-ribosylation factor family [PF00025.23, score=33.8]; AAA domain [PF13476.8, score=29.8]} {Human: ENSG00000168256, NKIRAS2, NFKB inhibitor interacting Ras like 2, [RH, Score=144, Expect=2e-43]; ENSG00000197885, NKIRAS1, NFKB inhibitor interacting Ras like 1, [RH, Score=140, Expect=6e-42]} {Mouse: ENSMUSG00000017837, Nkiras2, NFKB inhibitor interacting Ras-like protein 2, [RH, Score=144, Expect=1e-43]; ENSMUSG00000021772, Nkiras1, NFKB inhibitor interacting Ras-like protein 1, [RH, Score=138, Expect=4e-41]} {Dmel: FBgn0040513, kappaB-Ras, [RH, Score=117, Expect=6e-33]} {Celegans: WBGene00009919, kbrl-1, NF-kappa-B inhibitor-interacting Ras-like protein, [RH, Score=80.5, Expect=7e-19]} {Smed: dd_Smed_v6_8564_0_1, dd_Smed_v6_8564_0_1, [RH, Score=141, Expect=1e-42]} {RNA1509_28168, RNA1509_52972} {RNA1310_36887, RNA1509_28168, RNA1509_52972} {RNA1509_28168, RNA1509_52972, RNA815_17538}
3.	MligTC455_44085	545	11.35	Mlig455_011538	Neo: Int S/G2/M Age: -		0.956	-	-	-	0.956	-	-	Mlig455_011538 {REF} {Length: 1455} {NoTransDecoderORF} {RNA1509_11130} {RNA1310_5404} {RNA815_1916}
4.	MligTC455_32749	444	9.24	Mlig455_034970	Neo: - Age: -	SYNRG	0.951	-	-	-	0.951	-	-	Mlig455_034970 {REF} {Length: 5291} {TRANSSPLICED} {Human: ENSG00000275066, SYNRG, synergin gamma, [RH, Score=81.6, Expect=6e-15]; ENSG00000274047, SYNRG, synergin gamma, [RH, Score=81.6, Expect=6e-15]} {Mouse: ENSMUSG00000034940, Synrg, synergin, gamma, [RH, Score=80.1, Expect=1e-14]} {Celegans: WBGene00011218, R10E11.6, [RH, Score=65.9, Expect=5e-11]} {Smed: dd_Smed_v6_8044_0_1, dd_Smed_v6_8044_0_1, [RH, Score=71.2, Expect=2e-12]} {RNA1509_23685, RNA1509_56509} {RNA1310_5432, RNA1509_56509} {RNA1509_56509, RNA815_2849}

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