TomoSeq data search

Data search

Results for MligTC455_50726

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50726	167	3.48	Mlig455_033287	Neo: - Age: -	ZNF267	Mlig455_033287 {REF} {Length: 2920} {Pfam: Zinc-finger double domain [PF13465.8, score=31.7]; Zinc finger, C2H2 type [PF00096.28, score=27.9]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000185947, ZNF267, zinc finger protein 267, [Score=51.6, Expect=3e-09]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=51.2, Expect=3e-09]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=50.8, Expect=5e-09]; ENSG00000183647, ZNF530, zinc finger protein 530, [Score=50.8, Expect=4e-09]; ENSG00000149050, ZNF214, zinc finger protein 214, [Score=50.4, Expect=6e-09]; ENSG00000147789, ZNF7, zinc finger protein 7, [Score=50.4, Expect=5e-09]; ENSG00000165512, ZNF22, zinc finger protein 22, [Score=50.4, Expect=4e-09]; ENSG00000197779, ZNF81, zinc finger protein 81, [Score=50.4, Expect=7e-09]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=50.1, Expect=9e-09]; ENSG00000189298, ZKSCAN3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=1e-08]; ENSG00000197608, ZNF841, zinc finger protein 841, [Score=50.1, Expect=8e-09]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=50.1, Expect=9e-09]; ENSG00000196724, ZNF418, zinc finger protein 418, [Score=49.7, Expect=1e-08]; ENSG00000187626, ZKSCAN4, zinc finger with KRAB and SCAN domains 4, [Score=49.7, Expect=1e-08]; ENSG00000186814, ZSCAN30, zinc finger and SCAN domain containing 30, [Score=49.3, Expect=2e-08]; ENSG00000127081, ZNF484, zinc finger protein 484, [Score=49.3, Expect=2e-08]} {Mouse: ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=50.4, Expect=4e-09]; ENSMUSG00000054931, Zkscan4, zinc finger with KRAB and SCAN domains 4, [Score=50.1, Expect=7e-09]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=6e-09]; ENSMUSG00000050605, Zfp61, zinc finger protein 61, [Score=49.3, Expect=1e-08]; ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=48.9, Expect=2e-08]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=48.9, Expect=2e-08]; ENSMUSG00000055991, Zkscan5, zinc finger with KRAB and SCAN domains 5, [Score=48.5, Expect=2e-08]; ENSMUSG00000030393, Zik1, zinc finger protein interacting with K protein 1, [Score=48.5, Expect=2e-08]; ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=48.5, Expect=2e-08]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=48.1, Expect=3e-08]; ENSMUSG00000066613, Zfp932, zinc finger protein 932, [Score=48.1, Expect=3e-08]; ENSMUSG00000062040, Zfp27, zinc finger protein 27, [Score=48.1, Expect=3e-08]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=48.1, Expect=3e-08]; ENSMUSG00000059878, Zfp422, zinc finger protein 422, [Score=48.1, Expect=2e-08]; ENSMUSG00000079009, Gm14139, predicted gene 14139, [Score=48.1, Expect=2e-08]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=45.8, Expect=1e-07]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=44.7, Expect=2e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=43.1, Expect=7e-07]} {RNA1509_1946} {RNA1310_8728} {RNA815_20590}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50726

167

3.48

Mlig455_033287

Neo: -

Age: -

ZNF267

Mlig455_033287 {REF} {Length: 2920} {Pfam: Zinc-finger double domain [PF13465.8, score=31.7]; Zinc finger, C2H2 type [PF00096.28, score=27.9]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000185947, ZNF267, zinc finger protein 267, [Score=51.6, Expect=3e-09]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=51.2, Expect=3e-09]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=50.8, Expect=5e-09]; ENSG00000183647, ZNF530, zinc finger protein 530, [Score=50.8, Expect=4e-09]; ENSG00000149050, ZNF214, zinc finger protein 214, [Score=50.4, Expect=6e-09]; ENSG00000147789, ZNF7, zinc finger protein 7, [Score=50.4, Expect=5e-09]; ENSG00000165512, ZNF22, zinc finger protein 22, [Score=50.4, Expect=4e-09]; ENSG00000197779, ZNF81, zinc finger protein 81, [Score=50.4, Expect=7e-09]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=50.1, Expect=9e-09]; ENSG00000189298, ZKSCAN3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=1e-08]; ENSG00000197608, ZNF841, zinc finger protein 841, [Score=50.1, Expect=8e-09]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=50.1, Expect=9e-09]; ENSG00000196724, ZNF418, zinc finger protein 418, [Score=49.7, Expect=1e-08]; ENSG00000187626, ZKSCAN4, zinc finger with KRAB and SCAN domains 4, [Score=49.7, Expect=1e-08]; ENSG00000186814, ZSCAN30, zinc finger and SCAN domain containing 30, [Score=49.3, Expect=2e-08]; ENSG00000127081, ZNF484, zinc finger protein 484, [Score=49.3, Expect=2e-08]} {Mouse: ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=50.4, Expect=4e-09]; ENSMUSG00000054931, Zkscan4, zinc finger with KRAB and SCAN domains 4, [Score=50.1, Expect=7e-09]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=6e-09]; ENSMUSG00000050605, Zfp61, zinc finger protein 61, [Score=49.3, Expect=1e-08]; ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=48.9, Expect=2e-08]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=48.9, Expect=2e-08]; ENSMUSG00000055991, Zkscan5, zinc finger with KRAB and SCAN domains 5, [Score=48.5, Expect=2e-08]; ENSMUSG00000030393, Zik1, zinc finger protein interacting with K protein 1, [Score=48.5, Expect=2e-08]; ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=48.5, Expect=2e-08]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=48.1, Expect=3e-08]; ENSMUSG00000066613, Zfp932, zinc finger protein 932, [Score=48.1, Expect=3e-08]; ENSMUSG00000062040, Zfp27, zinc finger protein 27, [Score=48.1, Expect=3e-08]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=48.1, Expect=3e-08]; ENSMUSG00000059878, Zfp422, zinc finger protein 422, [Score=48.1, Expect=2e-08]; ENSMUSG00000079009, Gm14139, predicted gene 14139, [Score=48.1, Expect=2e-08]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=45.8, Expect=1e-07]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=44.7, Expect=2e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=43.1, Expect=7e-07]} {RNA1509_1946} {RNA1310_8728} {RNA815_20590}

Cumulative graph for MligTC455_50726

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.352	2.44	0.87654	1.00000
RegionR2	-0.124	2.44	0.87795	1.00000
RegionR3	-0.04	2.44	0.95753	1.00000
RegionR4	1.014	2.44	0.18927	0.46367
RegionR5	0.318	2.44	0.59558	0.95356
RegionR6	-0.386	2.44	0.60424	1.00000
RegionR7	-1.033	2.44	0.36528	1.00000
RegionR8	-0.102	2.44	0.93653	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.173	2.44	0.38876	1.00000
RegenerationR2	0.327	2.44	0.57987	0.90693
RegenerationR3	-0.583	2.44	0.42671	0.81931
RegenerationR4	-0.499	2.44	0.48122	0.85942
RegenerationR5	0.643	2.44	0.31379	0.73885
RegenerationR6	1.249	2.44	0.08427	0.36302
RegenerationBL	1.58	2.44	0.05875	0.28137
RegenerationTP	1.327	2.44	0.18368	0.62032

Genes with expression patterns similar to MligTC455_50726

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50726	167	3.48	Mlig455_033287	Neo: - Age: -	ZNF267	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033287 {REF} {Length: 2920} {Pfam: Zinc-finger double domain [PF13465.8, score=31.7]; Zinc finger, C2H2 type [PF00096.28, score=27.9]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000185947, ZNF267, zinc finger protein 267, [Score=51.6, Expect=3e-09]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=51.2, Expect=3e-09]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=50.8, Expect=5e-09]; ENSG00000183647, ZNF530, zinc finger protein 530, [Score=50.8, Expect=4e-09]; ENSG00000149050, ZNF214, zinc finger protein 214, [Score=50.4, Expect=6e-09]; ENSG00000147789, ZNF7, zinc finger protein 7, [Score=50.4, Expect=5e-09]; ENSG00000165512, ZNF22, zinc finger protein 22, [Score=50.4, Expect=4e-09]; ENSG00000197779, ZNF81, zinc finger protein 81, [Score=50.4, Expect=7e-09]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=50.1, Expect=9e-09]; ENSG00000189298, ZKSCAN3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=1e-08]; ENSG00000197608, ZNF841, zinc finger protein 841, [Score=50.1, Expect=8e-09]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=50.1, Expect=9e-09]; ENSG00000196724, ZNF418, zinc finger protein 418, [Score=49.7, Expect=1e-08]; ENSG00000187626, ZKSCAN4, zinc finger with KRAB and SCAN domains 4, [Score=49.7, Expect=1e-08]; ENSG00000186814, ZSCAN30, zinc finger and SCAN domain containing 30, [Score=49.3, Expect=2e-08]; ENSG00000127081, ZNF484, zinc finger protein 484, [Score=49.3, Expect=2e-08]} {Mouse: ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=50.4, Expect=4e-09]; ENSMUSG00000054931, Zkscan4, zinc finger with KRAB and SCAN domains 4, [Score=50.1, Expect=7e-09]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=50.1, Expect=6e-09]; ENSMUSG00000050605, Zfp61, zinc finger protein 61, [Score=49.3, Expect=1e-08]; ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=48.9, Expect=2e-08]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=48.9, Expect=2e-08]; ENSMUSG00000055991, Zkscan5, zinc finger with KRAB and SCAN domains 5, [Score=48.5, Expect=2e-08]; ENSMUSG00000030393, Zik1, zinc finger protein interacting with K protein 1, [Score=48.5, Expect=2e-08]; ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=48.5, Expect=2e-08]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=48.1, Expect=3e-08]; ENSMUSG00000066613, Zfp932, zinc finger protein 932, [Score=48.1, Expect=3e-08]; ENSMUSG00000062040, Zfp27, zinc finger protein 27, [Score=48.1, Expect=3e-08]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=48.1, Expect=3e-08]; ENSMUSG00000059878, Zfp422, zinc finger protein 422, [Score=48.1, Expect=2e-08]; ENSMUSG00000079009, Gm14139, predicted gene 14139, [Score=48.1, Expect=2e-08]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=45.8, Expect=1e-07]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=44.7, Expect=2e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=43.1, Expect=7e-07]} {RNA1509_1946} {RNA1310_8728} {RNA815_20590}
2.	MligTC455_29339	176	3.67	Mlig455_018221, Mlig455_036131	Neo: Irradiation Age: Up-Down-Down	CNBP	1.734	-	-	0.951	0.783	-	-	Mlig455_018221 {REF} {Length: 5982} {Pfam: Zinc knuckle [PF00098.25, score=25.6]} {RNA1509_21798} {RNA1310_927.1} {RNA815_827} Mlig455_036131 {REF} {Length: 4130} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.3]; Aspartyl protease [PF13650.8, score=23.3]; Zinc knuckle [PF00098.25, score=23.1]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=50.1, Expect=2e-06]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [Score=50.1, Expect=1e-06]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=112, Expect=1e-25]} {RNA1509_21798} {RNA1310_927.1} {RNA815_827}
3.	MligTC455_47419	162	3.37	Mlig455_057789	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.530 Region-enriched R2: 3.562/0.01646	CCDC24	0.986	-	-	0.986	-	-	-	Mlig455_057789 {REF} {Length: 1718} {TRANSSPLICED} {Pfam: Coiled-coil domain-containing protein 24 family [PF15669.7, score=113.7]} {Human: ENSG00000159214, CCDC24, coiled-coil domain containing 24, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_16835_0_1, dd_Smed_v6_16835_0_1, [RH, Score=142, Expect=4e-39]} {RNA1509_18205, RNA1509_43506} {RNA1310_20056.1, RNA1509_18205, RNA1509_43506} {RNA1509_18205, RNA1509_43506, RNA815_10809}
4.	MligTC455_15016	70	1.45	Mlig455_030543	Neo: - Age: -	LHX3	0.964	-	-	0.964	-	-	-	Mlig455_030543 {REF} {Length: 2024} {Pfam: LIM domain [PF00412.24, score=113.8]; Homeodomain [PF00046.31, score=69.9]; Homeobox KN domain [PF05920.13, score=20.4]} {Human: ENSG00000107187, LHX3, LIM homeobox 3, [RH, Score=319, Expect=6e-106]; ENSG00000121454, LHX4, LIM homeobox 4, [RH, Score=311, Expect=1e-102]} {Mouse: ENSMUSG00000026934, Lhx3, LIM homeobox protein 3, [RH, Score=319, Expect=8e-106]; ENSMUSG00000026468, Lhx4, LIM homeobox protein 4, [RH, Score=311, Expect=6e-103]} {Dmel: FBgn0002023, Lim3, [RH, Score=323, Expect=5e-106]} {Celegans: WBGene00000438, ceh-14, Homeobox protein ceh-14, [RH, Score=267, Expect=2e-86]} {Smed: dd_Smed_v6_20755_0_1, dd_Smed_v6_20755_0_1, [RH, Score=328, Expect=3e-111]} {RNA1310_33977} {RNA815_27636}
5.	MligTC455_18076	90	1.88	Mlig455_006853	Neo: - Age: -		0.963	-	-	0.963	-	-	-	Mlig455_006853 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_48189} {RNA815_23999}
6.	MligTC455_27516	344	7.16	Mlig455_006359	Neo: - Age: - Region-enriched R8: 2.915/0.00003	CRB2	0.961	-	-	-	-	-	0.961	Mlig455_006359 {REF} {Length: 4787} {Pfam: EGF-like domain [PF00008.29, score=141.4]; Human growth factor-like EGF [PF12661.9, score=84.4]; Laminin G domain [PF02210.26, score=54.9]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=357, Expect=5e-103]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=354, Expect=2e-102]} {Dmel: FBgn0259685, crb, crumbs, [Score=421, Expect=8e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=206, Expect=2e-53]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=169, Expect=3e-42]} {RNA1509_27798} {RNA1310_11414.1} {RNA815_8465}
7.	MligTC455_25832	10	0.2	Mlig455_001680	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_001680 {REF} {Length: 1336} {RNA1509_32923} {RNA1310_71250, RNA1509_32923} {RNA1509_32923, RNA815_419.1}
8.	MligTC455_29273	3628	75.58	Mlig455_065653	Neo: - Age: logFC(26M/2M)=0.877 Region-enriched R4: 1.271/0.01107		0.956	-	-	-	0.956	-	-	Mlig455_065653 {REF} {Length: 857} {NoTransDecoderORF} {RNA1509_13837, RNA1509_27082, RNA1509_47832} {RNA1310_54588.1, RNA1509_27082, RNA1509_47832} {RNA1509_27082, RNA1509_47832, RNA815_30379}
9.	MligTC455_42887	60	1.24	Mlig455_036468, Mlig455_056252	Neo: - Age: -	CCKAR	0.955	-	-	0.955	-	-	-	Mlig455_036468 {REF} {Length: 2390} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=81.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=37.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.5]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=53.5, Expect=5e-07]; ENSG00000170425, ADORA2B, adenosine A2b receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=59.3, Expect=4e-09]} {Dmel: FBgn0264002, MsR2, Myosuppressin receptor 2, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=69.7, Expect=9e-13]} {RNA1310_37299} {RNA815_29990} Mlig455_056252 {REF} {Length: 2265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.8]} {RNA1310_56612} {RNA815_44133}
10.	MligTC455_26264	329	6.86	Mlig455_062063	Neo: - Age: Down-Down-Down Region-enriched R5: 1.702/0.03238	NR1I3	0.954	-	-	-	-	-	0.954	Mlig455_062063 {REF} {Length: 4111} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_9731.1} {RNA815_11206}