TomoSeq data search

Data search

Results for MligTC455_50787

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50787

53

1.10

Mlig455_001871

Neo: -

Age: Down-Down-Up

GATA6

Mlig455_001871 {REF} {Length: 1997} {tRNA: Val(CAC),pseudo, score=23.2} {Pfam: GATA zinc finger [PF00320.29, score=52.1]; TFIIB zinc-binding [PF08271.14, score=20.6]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=88.2, Expect=1e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=86.7, Expect=2e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=88.2, Expect=8e-19]} {Celegans: WBGene00001253, elt-6, Erythroid-Like Transcription factor family; GATA-like transcription factor ELT-6, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=78.6, Expect=5e-16]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962}

Cumulative graph for MligTC455_50787

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.94	1.067	0.20852	0.84751
RegionR2	-1.02	1.067	0.99970	1.00000
RegionR3	1.166	1.067	0.19826	0.73727
RegionR4	0.892	1.067	0.23695	0.53197
RegionR5	2.222	1.067	0.02087	0.10005
RegionR6	-1.847	1.067	0.99970	1.00000
RegionR7	-2.096	1.067	0.99976	1.00000
RegionR8	-2.256	1.067	0.99967	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.406	1.067	0.50532	1.00000
RegenerationR2	2.044	1.067	0.19122	0.63493
RegenerationR3	2.33	1.067	0.06033	0.41825
RegenerationR4	1.673	1.067	0.16487	0.59942
RegenerationR5	0.591	1.067	0.53052	0.87517
RegenerationR6	5.447	1.067	0.00170	0.04610
RegenerationBL	0.761	1.067	0.99997	1.00000
RegenerationTP	0.829	1.067	1.00000	1.00000

Genes with expression patterns similar to MligTC455_50787

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50787	53	1.1	Mlig455_001871	Neo: - Age: Down-Down-Up	GATA6	3	-	-	-	1.000	1.000	1.000	Mlig455_001871 {REF} {Length: 1997} {tRNA: Val(CAC),pseudo, score=23.2} {Pfam: GATA zinc finger [PF00320.29, score=52.1]; TFIIB zinc-binding [PF08271.14, score=20.6]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=88.2, Expect=1e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=86.7, Expect=2e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=88.2, Expect=8e-19]} {Celegans: WBGene00001253, elt-6, Erythroid-Like Transcription factor family; GATA-like transcription factor ELT-6, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=78.6, Expect=5e-16]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962}
2.	MligTC455_37555	40	0.83	Mlig455_065491	Neo: - Age: - Region-enriched R2: 6.094/0.03030 Regeneration-upregulated R6: 7.345 Regeneration-enriched R6: 7.345	NWD2	1.7	-	-	-	0.964	-	0.736	Mlig455_065491 {REF} {Length: 8306} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=43.5]; NACHT domain [PF05729.14, score=37.4]; ATPase domain predominantly from Archaea [PF01637.20, score=24.7]; AAA domain [PF13401.8, score=20.1]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [RH, Score=488, Expect=5e-143]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [RH, Score=468, Expect=4e-136]} {Dmel: FBgn0038397, CG10185, [RH, Score=1028, Expect=0.0]} {Celegans: WBGene00020254, T05C3.2, [RH, Score=959, Expect=0.0]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=370, Expect=8e-104]} {RNA1509_51969} {RNA1310_31268, RNA1509_51969} {RNA1509_51969, RNA815_17901}
3.	MligTC455_53893	11	0.22	Mlig455_049631	Neo: - Age: logFC(26M/2M)=4.483 Region-enriched R4: 5.952/0.02240		1.675	-	-	-	0.710	0.965	-	Mlig455_049631 {REF} {Length: 1950} {Pfam: Lectin C-type domain [PF00059.23, score=39.0]} {Mouse: ENSMUSG00000030149, Klrk1, killer cell lectin-like receptor subfamily K, member 1, [Score=47.4, Expect=1e-05]} {RNA1509_21708} {RNA1310_11823, RNA1509_21708} {RNA1509_21708, RNA815_25092.1}
4.	MligTC455_19005	27	0.55	Mlig455_033827	Neo: - Age: - Region-enriched R4: 6.306/0.00129 Region-enriched R5: 3.009/0.01229		0.986	-	-	-	-	0.986	-	Mlig455_033827 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_41003.1} {RNA815_28385}
5.	MligTC455_14602	75	1.57	Mlig455_048086	Neo: - Age: -	ANO4	0.97	-	-	-	-	0.970	-	Mlig455_048086 {REF} {Length: 3765} {Pfam: Calcium-activated chloride channel [PF04547.14, score=386.9]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=62.2]} {Human: ENSG00000151572, ANO4, anoctamin 4, [Score=392, Expect=6e-123]; ENSG00000171714, ANO5, anoctamin 5, [Score=384, Expect=2e-120]; ENSG00000047617, ANO2, anoctamin 2, [Score=382, Expect=8e-119]; ENSG00000131620, ANO1, anoctamin 1, [Score=380, Expect=6e-120]; ENSG00000177119, ANO6, anoctamin 6, [Score=376, Expect=8e-118]; ENSG00000134343, ANO3, anoctamin 3, [Score=376, Expect=6e-117]} {Mouse: ENSMUSG00000035189, Ano4, anoctamin 4, [Score=387, Expect=3e-121]; ENSMUSG00000034107, Ano7, anoctamin 7, [Score=381, Expect=4e-120]; ENSMUSG00000055489, Ano5, anoctamin 5, [Score=379, Expect=3e-120]; ENSMUSG00000064210, Ano6, anoctamin 6, [Score=378, Expect=4e-118]; ENSMUSG00000031075, Ano1, anoctamin 1, calcium activated chloride channel, [Score=378, Expect=5e-118]; ENSMUSG00000038115, Ano2, anoctamin 2, [Score=377, Expect=3e-117]; ENSMUSG00000074968, Ano3, anoctamin 3, [Score=372, Expect=2e-115]} {Dmel: FBgn0036235, CG6938, [Score=385, Expect=1e-118]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=162, Expect=2e-41]} {Smed: dd_Smed_v6_19189_0_1, dd_Smed_v6_19189_0_1, [Score=352, Expect=9e-111]} {RNA1509_13805} {RNA1310_9037} {RNA815_32354}
6.	MligTC455_18587	9	0.18	Mlig455_056267	Neo: - Age: -	FGG	0.968	-	-	-	-	0.968	-	Mlig455_056267 {REF} {Length: 1242} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=122.7]} {Human: ENSG00000171557, FGG, fibrinogen gamma chain, [Score=99.0, Expect=5e-23]} {Mouse: ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=95.9, Expect=5e-22]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=91.3, Expect=7e-21]} {Dmel: FBgn0051832, CG31832, [Score=90.1, Expect=3e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=76.3, Expect=1e-15]} {RNA1310_68179}
7.	MligTC455_38204	87	1.8	Mlig455_053610	Neo: - Age: -	HSPA12B	0.966	-	-	-	0.966	-	-	Mlig455_053610 {REF} {Length: 5264} {Pfam: Spt20 family [PF12090.10, score=18.7]} {Human: ENSG00000132622, HSPA12B, heat shock protein family A (Hsp70) member 12B, [RH, Score=355, Expect=4e-108]} {Mouse: ENSMUSG00000074793, Hspa12b, heat shock protein 12B, [RH, Score=337, Expect=1e-101]; ENSMUSG00000025092, Hspa12a, heat shock protein 12A, [RH, Score=335, Expect=8e-101]} {RNA1509_27166} {RNA1310_7824, RNA1509_27166} {RNA1509_27166, RNA815_9111}
8.	MligTC455_19138	92	1.91	Mlig455_028338	Neo: - Age: -	CCDC103	0.965	-	-	-	-	0.965	-	Mlig455_028338 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Dynein attachment factor N-terminus [PF15867.7, score=94.3]; Potential Monad-binding region of RPAP3 [PF13877.8, score=59.1]} {Human: ENSG00000167131, CCDC103, coiled-coil domain containing 103, [RH, Score=105, Expect=5e-27]; ENSG00000214447, FAM187A, family with sequence similarity 187 member A, [RH, Score=105, Expect=6e-27]} {Mouse: ENSMUSG00000020930, Ccdc103, coiled-coil domain containing 103, [RH, Score=111, Expect=1e-29]} {Dmel: FBgn0033623, CG13202, [RH, Score=46.6, Expect=6e-07]} {Smed: dd_Smed_v6_14131_0_1, dd_Smed_v6_14131_0_1, [RH, Score=87.8, Expect=5e-21]} {RNA1509_44514} {RNA1310_34867.1} {RNA815_14846}
9.	MligTC455_27548	64	1.33	Mlig455_021305	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.782	GAA	0.962	-	-	-	0.962	-	-	Mlig455_021305 {REF} {Length: 3926} {Pfam: Glycosyl hydrolases family 31 [PF01055.28, score=285.6]} {Human: ENSG00000171298, GAA, glucosidase alpha, acid, [Score=268, Expect=4e-80]; ENSG00000257335, MGAM, maltase-glucoamylase, [Score=261, Expect=4e-76]} {Mouse: ENSMUSG00000025579, Gaa, glucosidase, alpha, acid, [Score=283, Expect=1e-85]} {Dmel: FBgn0027588, GCS2alpha, Glucosidase 2 alpha subunit, [Score=157, Expect=5e-41]} {Celegans: WBGene00017071, aagr-1, Acid Alpha Glucosidase Relate, [Score=200, Expect=6e-56]} {Smed: dd_Smed_v6_4668_0_1, dd_Smed_v6_4668_0_1, [Score=264, Expect=3e-79]} {RNA1509_26177, RNA1509_53093} {RNA1310_3380.1, RNA1509_26177} {RNA1509_26177, RNA815_1621.1}
10.	MligTC455_22311	74	1.53	Mlig455_001822	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_001822 {REF} {Length: 1911} {RNA1310_30832} {RNA815_15518}
11.	MligTC455_03435	34	0.71	Mlig455_068694, Mlig455_068720	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_068694 {REF} {Length: 508} {NoTransDecoderORF} {RNA1509_46565} {RNA1310_64787} {RNA815_53933} Mlig455_068720 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_22119} {RNA1310_64787} {RNA815_53933}
12.	MligTC455_07325	28	0.57	Mlig455_000264	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_000264 {REF} {Length: 1335} {RNA1509_27596} {RNA1310_46876} {RNA815_29868}
13.	MligTC455_21954	90	1.87	Mlig455_018151, Mlig455_018168	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.790		0.951	-	-	-	-	-	0.951	Mlig455_018151 {REF} {Length: 2349} {Pfam: Major Facilitator Superfamily [PF07690.18, score=57.3]; Nodulin-like [PF06813.15, score=37.8]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1} Mlig455_018168 {REF} {Length: 2957} {Pfam: Major Facilitator Superfamily [PF07690.18, score=57.3]; Nodulin-like [PF06813.15, score=37.8]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1}

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