Data search
Results for MligTC455_50796
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50796 | 1383 | 28.81 | Mlig455_054490 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.179/0.00370 |
CDK2AP2 | Mlig455_054490 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Cyclin-dependent kinase 2-associated protein [PF09806.11, score=61.1]} {Human: ENSG00000167797, CDK2AP2, cyclin dependent kinase 2 associated protein 2, [RH, Score=78.6, Expect=4e-20]} {Mouse: ENSMUSG00000024856, Cdk2ap2, CDK2-associated protein 2, [RH, Score=78.6, Expect=3e-20]; ENSMUSG00000097485, Cdk2ap2, CDK2-associated protein 2, [RH, Score=78.6, Expect=3e-20]} {Dmel: FBgn0030269, CDK2AP1, CDK2-associated protein 1, [RH, Score=75.5, Expect=5e-18]} {Celegans: WBGene00012807, Y43F4B.10, [RH, Score=59.3, Expect=4e-13]} {Smed: dd_Smed_v6_552_0_1, dd_Smed_v6_552_0_1, [RH, Score=84.3, Expect=1e-23]} {RNA1509_32334, RNA1509_46921} {RNA1310_61972.1, RNA1509_46921} {RNA1509_46921, RNA815_31691.1} |
Cumulative graph for MligTC455_50796
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.183 | 5.017 | 0.12504 | 0.71989 | |
| RegionR2 | -0.58 | 5.017 | 0.10718 | 0.40375 | |
| RegionR3 | 0.338 | 5.017 | 0.23368 | 0.77566 | |
| RegionR4 | 1.179 | 5.017 | 0.00027 | 0.00370 | |
| RegionR5 | 0.77 | 5.017 | 0.00354 | 0.02678 | |
| RegionR6 | 0.398 | 5.017 | 0.17156 | 0.72933 | |
| RegionR7 | -0.507 | 5.017 | 0.16967 | 0.75849 | |
| RegionR8 | -0.415 | 5.017 | 0.31358 | 0.94584 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.915 | 5.017 | 0.19132 | 0.93000 | |
| RegenerationR2 | -0.466 | 5.017 | 0.16229 | 0.59953 | |
| RegenerationR3 | 0.004 | 5.017 | 0.99273 | 1.00000 | |
| RegenerationR4 | -0.163 | 5.017 | 0.63232 | 0.92417 | |
| RegenerationR5 | 0.038 | 5.017 | 0.90762 | 1.00000 | |
| RegenerationR6 | 0.179 | 5.017 | 0.60218 | 0.86972 | |
| RegenerationBL | -0.06 | 5.017 | 0.87598 | 1.00000 | |
| RegenerationTP | 0.299 | 5.017 | 0.47194 | 0.88215 |
Genes with expression patterns similar to MligTC455_50796
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50796 | 1383 | 28.81 | Mlig455_054490 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.179/0.00370 |
CDK2AP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054490 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Cyclin-dependent kinase 2-associated protein [PF09806.11, score=61.1]} {Human: ENSG00000167797, CDK2AP2, cyclin dependent kinase 2 associated protein 2, [RH, Score=78.6, Expect=4e-20]} {Mouse: ENSMUSG00000024856, Cdk2ap2, CDK2-associated protein 2, [RH, Score=78.6, Expect=3e-20]; ENSMUSG00000097485, Cdk2ap2, CDK2-associated protein 2, [RH, Score=78.6, Expect=3e-20]} {Dmel: FBgn0030269, CDK2AP1, CDK2-associated protein 1, [RH, Score=75.5, Expect=5e-18]} {Celegans: WBGene00012807, Y43F4B.10, [RH, Score=59.3, Expect=4e-13]} {Smed: dd_Smed_v6_552_0_1, dd_Smed_v6_552_0_1, [RH, Score=84.3, Expect=1e-23]} {RNA1509_32334, RNA1509_46921} {RNA1310_61972.1, RNA1509_46921} {RNA1509_46921, RNA815_31691.1} |
| 2. | MligTC455_30218 | 2357 | 49.1 | Mlig455_021891, Mlig455_028635 | Neo: - |
1.662 | - | - | - | - | 0.952 | 0.710 | Mlig455_021891 {REF} {Length: 825} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_028635 {REF} {Length: 952} {TRANSSPLICED} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} |
|
| 3. | MligTC455_32715 | 7927 | 165.14 | Mlig455_048846 | Neo: Int S/G2/M Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_048846 {REF} {Length: 542} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_795} {RNA1310_52206.1, RNA1509_795} {RNA1509_795, RNA815_26551.1} | |
| 4. | MligTC455_36833 | 3066 | 63.87 | Mlig455_051663 | Neo: - Age: - |
RNASEK | 0.951 | - | - | - | - | 0.951 | - | Mlig455_051663 {REF} {Length: 1148} {TRANSSPLICED} {Human: ENSG00000219200, RNASEK, ribonuclease K, [RH, Score=79.7, Expect=5e-20]} {Mouse: ENSMUSG00000040904, Gm21988, predicted gene 21988, [RH, Score=79.0, Expect=2e-20]; ENSMUSG00000093989, Rnasek, ribonuclease, RNase K, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0262116, RNASEK, Ribonuclease kappa, [RH, Score=72.4, Expect=6e-18]} {Celegans: WBGene00009881, F49C12.12, [Score=64.7, Expect=4e-15]} {Smed: dd_Smed_v6_1020_0_1, dd_Smed_v6_1020_0_1, [RH, Score=96.7, Expect=9e-28]} {RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1310_30609, RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1509_14152, RNA1509_18600, RNA1509_21585, RNA815_13737.1} |
| 5. | MligTC455_45992 | 3470 | 72.29 | Mlig455_005099 | Neo: - Age: logFC(26M/2M)=-0.211 |
SYP | 0.951 | - | - | - | 0.951 | - | - | Mlig455_005099 {REF} {Length: 2361} {TRANSSPLICED} {Pfam: Membrane-associating domain [PF01284.25, score=76.2]} {Human: ENSG00000102003, SYP, synaptophysin, [Score=111, Expect=6e-29]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [Score=110, Expect=1e-28]; ENSMUSG00000020570, Sypl, synaptophysin-like protein, [Score=110, Expect=2e-29]; ENSMUSG00000056296, Synpr, synaptoporin, [Score=109, Expect=1e-28]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [Score=149, Expect=8e-45]} {RNA1509_3213, RNA1509_34204, RNA1509_36159, RNA1509_5883, RNA1509_7503, RNA1509_8919, RNA1509_9574} {RNA1310_24315, RNA1509_3213, RNA1509_34204, RNA1509_36159, RNA1509_5883, RNA1509_7503, RNA1509_8919, RNA1509_9574} {RNA1509_3213, RNA1509_34204, RNA1509_36159, RNA1509_5883, RNA1509_7503, RNA1509_8919, RNA1509_9574, RNA815_5997} |
Berezikov Lab - 2020-2021 © ERIBA