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Results for MligTC455_50813

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50813 733 15.26 Mlig455_069871

Neo: Neoblast

Age: -

Region-enriched R4: 1.943/0.04167

Regeneration-upregulated R6: 1.964

Regeneration-enriched R6: 1.964

 KHDRBS2 Mlig455_069871 {REF} {Length: 2242} {Pfam: KH domain [PF00013.31, score=29.7]} {Human: ENSG00000112232, KHDRBS2, KH RNA binding domain containing, signal transduction associated 2, [Score=125, Expect=1e-32]; ENSG00000131773, KHDRBS3, KH RNA binding domain containing, signal transduction associated 3, [Score=123, Expect=8e-32]; ENSG00000121774, KHDRBS1, KH RNA binding domain containing, signal transduction associated 1, [Score=119, Expect=6e-30]} {Mouse: ENSMUSG00000026058, Khdrbs2, KH domain containing, RNA binding, signal transduction associated 2, [Score=125, Expect=5e-33]; ENSMUSG00000022332, Khdrbs3, KH domain containing, RNA binding, signal transduction associated 3, [Score=123, Expect=6e-32]; ENSMUSG00000028790, Khdrbs1, KH domain containing, RNA binding, signal transduction associated 1, [Score=120, Expect=2e-30]} {Dmel: FBgn0022987, qkr54B, quaking related 54B, [RH, Score=124, Expect=5e-32]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=86.7, Expect=4e-19]} {Smed: dd_Smed_v6_294_0_1, dd_Smed_v6_294_0_1, [RH, Score=160, Expect=8e-47]} {RNA1509_1718} {RNA1310_7613.1} {RNA815_3481.1}

Cumulative graph for MligTC455_50813

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.369 4.164 0.08591 0.63660
RegionR2 0.68 4.164 0.45330 0.84071
RegionR3 1.194 4.164 0.09462 0.54125
RegionR4 1.943 4.164 0.00597 0.04167
RegionR5 0.881 4.164 0.26252 0.58439
RegionR6 0.122 4.164 0.80073 1.00000
RegionR7 1.564 4.164 0.04347 0.40121
RegionR8 -0.016 4.164 0.86166 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.347 4.164 0.03727 0.65473
RegenerationR2 -0.35 4.164 0.44241 0.84114
RegenerationR3 0.404 4.164 0.40599 0.80651
RegenerationR4 0.635 4.164 0.19592 0.64103
RegenerationR5 0.903 4.164 0.04699 0.35122
RegenerationR6 1.964 4.164 0.00011 0.00979 Specific for R6: 1.964
RegenerationBL 1.162 4.164 0.03014 0.19361
RegenerationTP 0.128 4.164 0.84615 1.00000


Genes with expression patterns similar to MligTC455_50813

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50813 733 15.26 Mlig455_069871

Neo: Neoblast

Age: -

Region-enriched R4: 1.943/0.04167

Regeneration-upregulated R6: 1.964

Regeneration-enriched R6: 1.964

 KHDRBS2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069871 {REF} {Length: 2242} {Pfam: KH domain [PF00013.31, score=29.7]} {Human: ENSG00000112232, KHDRBS2, KH RNA binding domain containing, signal transduction associated 2, [Score=125, Expect=1e-32]; ENSG00000131773, KHDRBS3, KH RNA binding domain containing, signal transduction associated 3, [Score=123, Expect=8e-32]; ENSG00000121774, KHDRBS1, KH RNA binding domain containing, signal transduction associated 1, [Score=119, Expect=6e-30]} {Mouse: ENSMUSG00000026058, Khdrbs2, KH domain containing, RNA binding, signal transduction associated 2, [Score=125, Expect=5e-33]; ENSMUSG00000022332, Khdrbs3, KH domain containing, RNA binding, signal transduction associated 3, [Score=123, Expect=6e-32]; ENSMUSG00000028790, Khdrbs1, KH domain containing, RNA binding, signal transduction associated 1, [Score=120, Expect=2e-30]} {Dmel: FBgn0022987, qkr54B, quaking related 54B, [RH, Score=124, Expect=5e-32]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=86.7, Expect=4e-19]} {Smed: dd_Smed_v6_294_0_1, dd_Smed_v6_294_0_1, [RH, Score=160, Expect=8e-47]} {RNA1509_1718} {RNA1310_7613.1} {RNA815_3481.1}
2. MligTC455_52639 839 17.48 Mlig455_059531

Neo: Int S/G2/M

Age: -

 1.781 - - - 0.960 - 0.821 Mlig455_059531 {REF} {Length: 1464} {TRANSSPLICED} {Dmel: FBgn0031231, mRpL10, mitochondrial ribosomal protein L10, [RH, Score=60.5, Expect=1e-10]} {Smed: dd_Smed_v6_7627_0_1, dd_Smed_v6_7627_0_1, [RH, Score=93.6, Expect=5e-23]} {RNA1509_38147, RNA1509_39962} {RNA1310_9603, RNA1509_38147} {RNA1509_38147, RNA815_13765}
3. MligTC455_25032 928 19.34 Mlig455_061298, Mlig455_061299, Mlig455_062656

Neo: Irradiation

Age: -

Region-enriched R5: 1.890/0.00071

 RFC3 0.969 - - - 0.969 - -

Mlig455_061298 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA ATPase domain [PF13191.8, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=1e-175]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=497, Expect=1e-177]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=480, Expect=6e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=7e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=444, Expect=3e-157]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346}

Mlig455_061299 {REF} {Length: 923} {RNA1509_12650} {RNA1310_19461.1} {RNA815_61018}

Mlig455_062656 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1, RNA1509_12650} {RNA1509_12650, RNA815_9346}
4. MligTC455_26507 103 2.14 Mlig455_012440, Mlig455_012482

Neo: -

Age: Down-Down-Down

 0.967 - - - 0.967 - -

Mlig455_012440 {REF} {Length: 382} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.2} {RNA815_3012.1}

Mlig455_012482 {REF} {Length: 1107} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=67.7]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=1e-15]} {RNA1509_14584} {RNA1310_14574.2} {RNA815_22175.1}
5. MligTC455_42549 825 17.18 Mlig455_057020

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.473

Region-specific R5: 2.261

Region-enriched R5: 1.949/0.00000

 0.966 - - - 0.966 - - Mlig455_057020 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Urb2/Npa2 family [PF10441.11, score=24.2]} {RNA1509_13931} {RNA1310_18688.1, RNA1509_13931} {RNA1509_13931, RNA815_25561}
6. MligTC455_52501 667 13.9 Mlig455_033828

Neo: -

Age: -

 GRHPR 0.962 - - - 0.962 - - Mlig455_033828 {REF} {Length: 2409} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=170.9]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=55.1]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.9]} {Human: ENSG00000137106, GRHPR, glyoxylate and hydroxypyruvate reductase, [Score=166, Expect=3e-48]} {Mouse: ENSMUSG00000035637, Grhpr, glyoxylate reductase/hydroxypyruvate reductase, [Score=157, Expect=4e-45]} {Dmel: FBgn0037370, CG1236, [Score=150, Expect=3e-42]} {Celegans: WBGene00007836, C31C9.2, [Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_8767_0_1, dd_Smed_v6_8767_0_1, [Score=174, Expect=8e-52]} {RNA1509_31439, RNA1509_6635} {RNA1310_17744, RNA1509_31439, RNA1509_6635} {RNA1509_31439, RNA1509_6635, RNA815_8969}
7. MligTC455_38343 1290 26.87 Mlig455_021940

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.400

Region-enriched R5: 1.042/0.00235

 MRPS18B 0.955 - - - 0.955 - - Mlig455_021940 {REF} {Length: 1817} {TRANSSPLICED} {Human: ENSG00000203624, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000204568, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000229861, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000223775, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000233813, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000226111, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000227420, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]} {Mouse: ENSMUSG00000024436, Mrps18b, mitochondrial ribosomal protein S18B, [RH, Score=88.2, Expect=3e-20]} {Dmel: FBgn0032849, mRpS18B, mitochondrial ribosomal protein S18B, [RH, Score=138, Expect=5e-40]} {Celegans: WBGene00011759, mrps-18B, Mitochondrial Ribosomal Protein, Small, [RH, Score=84.0, Expect=4e-19]} {Smed: dd_Smed_v6_3535_0_1, dd_Smed_v6_3535_0_1, [RH, Score=131, Expect=7e-37]} {RNA1509_17779, RNA1509_41779} {RNA1310_13167, RNA1509_17779, RNA1509_41779} {RNA1509_17779, RNA1509_41779, RNA815_325}

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