TomoSeq data search

Data search

Results for MligTC455_50859

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50859

776

16.16

Mlig455_007129

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=-0.629

EIF5

Mlig455_007129 {REF} {Length: 2207} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=128.6]; eIF4-gamma/eIF5/eIF2-epsilon [PF02020.20, score=61.0]} {Human: ENSG00000100664, EIF5, eukaryotic translation initiation factor 5, [Score=286, Expect=1e-91]} {Mouse: ENSMUSG00000021282, Eif5, eukaryotic translation initiation factor 5, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0030719, eIF5, eukaryotic translation initiation factor 5, [RH, Score=288, Expect=2e-92]} {Celegans: WBGene00016496, C37C3.2, Eukaryotic translation initiation factor 5, [RH, Score=275, Expect=1e-87]} {Smed: dd_Smed_v6_2267_0_1, dd_Smed_v6_2267_0_1, [RH, Score=194, Expect=7e-58]} {RNA1509_2860} {RNA1310_1097.1, RNA1509_2860} {RNA1509_2860, RNA815_11901.1}

Cumulative graph for MligTC455_50859

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.623	4.374	0.23775	0.88275
RegionR2	0.707	4.374	0.19392	0.55098
RegionR3	0.443	4.374	0.30261	0.84442
RegionR4	0.407	4.374	0.35877	0.68149
RegionR5	0.57	4.374	0.13421	0.37400
RegionR6	-0.211	4.374	0.66047	1.00000
RegionR7	-0.69	4.374	0.32653	0.96119
RegionR8	0.397	4.374	0.61622	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.062	4.374	0.23885	0.96582
RegenerationR2	0.168	4.374	0.67780	0.94795
RegenerationR3	0.33	4.374	0.46229	0.83915
RegenerationR4	0.133	4.374	0.75559	0.97119
RegenerationR5	0.086	4.374	0.83459	0.99913
RegenerationR6	1.062	4.374	0.02105	0.18011
RegenerationBL	1.066	4.374	0.04608	0.24563
RegenerationTP	1.152	4.374	0.06241	0.40428

Genes with expression patterns similar to MligTC455_50859

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50859	776	16.16	Mlig455_007129	Neo: Int S/G2/M Age: Down-Down-Down, logFC(26M/2M)=-0.629	EIF5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007129 {REF} {Length: 2207} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=128.6]; eIF4-gamma/eIF5/eIF2-epsilon [PF02020.20, score=61.0]} {Human: ENSG00000100664, EIF5, eukaryotic translation initiation factor 5, [Score=286, Expect=1e-91]} {Mouse: ENSMUSG00000021282, Eif5, eukaryotic translation initiation factor 5, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0030719, eIF5, eukaryotic translation initiation factor 5, [RH, Score=288, Expect=2e-92]} {Celegans: WBGene00016496, C37C3.2, Eukaryotic translation initiation factor 5, [RH, Score=275, Expect=1e-87]} {Smed: dd_Smed_v6_2267_0_1, dd_Smed_v6_2267_0_1, [RH, Score=194, Expect=7e-58]} {RNA1509_2860} {RNA1310_1097.1, RNA1509_2860} {RNA1509_2860, RNA815_11901.1}
2.	MligTC455_31445	1205	25.1	Mlig455_063665	Neo: Int S/G2/M Age: - Region-enriched R5: 1.051/0.00174	AHCYL2	1.822	0.868	-	-	-	0.954	-	Mlig455_063665 {REF} {Length: 2796} {Pfam: S-adenosyl-L-homocysteine hydrolase [PF05221.19, score=234.2]; S-adenosyl-L-homocysteine hydrolase, NAD binding domain [PF00670.23, score=225.0]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=38.9]; Acetohydroxy acid isomeroreductase, NADPH-binding domain [PF07991.14, score=23.5]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=19.6]} {Human: ENSG00000158467, AHCYL2, adenosylhomocysteinase like 2, [Score=483, Expect=1e-164]} {Mouse: ENSMUSG00000029772, Ahcyl2, S-adenosylhomocysteine hydrolase-like 2, [Score=483, Expect=4e-166]} {Dmel: FBgn0035371, AhcyL1, Adenosylhomocysteinase like 1, [Score=493, Expect=3e-170]} {Celegans: WBGene00019322, ahcy-1, Adenosylhomocysteinase, [Score=330, Expect=5e-108]} {Smed: dd_Smed_v6_5492_0_1, dd_Smed_v6_5492_0_1, [Score=475, Expect=3e-163]} {RNA1509_7070} {RNA1310_5412} {RNA815_4105}
3.	MligTC455_46678	1233	25.69	Mlig455_001207	Neo: - Age: - Region-enriched R5: 1.213/0.00052	C3orf58	0.977	-	-	-	-	0.977	-	Mlig455_001207 {REF} {Length: 1738} {TRANSSPLICED} {Pfam: Protein-kinase domain of FAM69 [PF12260.10, score=100.0]} {Human: ENSG00000181744, C3orf58, chromosome 3 open reading frame 58, [RH, Score=165, Expect=6e-46]} {Mouse: ENSMUSG00000045414, 1190002N15Rik, RIKEN cDNA 1190002N15 gene, [RH, Score=162, Expect=6e-45]} {Smed: dd_Smed_v6_8114_0_1, dd_Smed_v6_8114_0_1, [RH, Score=163, Expect=2e-45]} {RNA1509_12580} {RNA1310_17698.1, RNA1509_12580} {RNA1509_12580, RNA815_6835.1}
4.	MligTC455_18984	610	12.7	Mlig455_002868	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.175 Regeneration-enriched BL: 2.175		0.96	-	-	-	-	0.960	-	Mlig455_002868 {REF} {Length: 7266} {TRANSSPLICED} {Pfam: beta-propeller of ELYS nucleoporin [PF16687.7, score=74.2]; Nuclear pore complex assembly [PF13934.8, score=57.3]} {Mouse: ENSMUSG00000026491, Ahctf1, AT hook containing transcription factor 1, [RH, Score=150, Expect=2e-35]} {Dmel: FBgn0031052, CG14215, [RH, Score=70.1, Expect=3e-11]} {RNA1509_41709, RNA1509_4237} {RNA1310_389.1, RNA1509_41709} {RNA1509_41709, RNA815_8171.1}
5.	MligTC455_47999	148	3.07	Mlig455_000492	Neo: - Age: -	SCARB2	0.957	0.957	-	-	-	-	-	Mlig455_000492 {REF} {Length: 2791} {Pfam: CD36 family [PF01130.23, score=368.6]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=253, Expect=1e-77]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=256, Expect=7e-79]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=192, Expect=8e-55]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=4e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=289, Expect=6e-92]} {RNA1509_17179} {RNA1310_15296} {RNA815_6402.1}
6.	MligTC455_46707	2865	59.69	Mlig455_063531	Neo: Int S/G2/M Age: -	PSMD3	0.956	-	-	-	-	0.956	-	Mlig455_063531 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: Proteasome regulatory subunit C-terminal [PF08375.13, score=80.2]; PCI domain [PF01399.29, score=76.7]} {Human: ENSG00000108344, PSMD3, proteasome 26S subunit, non-ATPase 3, [RH, Score=431, Expect=1e-146]} {Mouse: ENSMUSG00000017221, Psmd3, proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, [RH, Score=432, Expect=8e-147]} {Dmel: FBgn0261396, Rpn3, Regulatory particle non-ATPase 3, [RH, Score=416, Expect=2e-141]} {Celegans: WBGene00004460, rpn-3, 26S proteasome non-ATPase regulatory subunit 3, [RH, Score=300, Expect=3e-96]} {Smed: dd_Smed_v6_1449_0_1, dd_Smed_v6_1449_0_1, [RH, Score=463, Expect=4e-160]} {RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198} {RNA1310_10547, RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198} {RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198, RNA815_3693}

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